Standard name | |
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Human Ortholog | |
Description | N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase; required for 'de novo' purine nucleotide biosynthesis; red pigment accumulates in mutant cells deprived of adenine; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 | 2 | 6 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Bud | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 1 | 4 | 1 | 11 | 14 | 11 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 0 | 1 | 4 | 3 | 4 | 9 | 4 | 9 | 10 | 5 | 0 | 3 | 3 | 2 | 1 | 3 | 0 | 0 | 0 | 3 | 1 | 0 |
Cytoplasm | 421 | 685 | 229 | 205 | 234 | 255 | 260 | 357 | 290 | 279 | 151 | 122 | 408 | 508 | 531 | 293 | 266 | 199 | 398 | 649 | 206 | 387 | 419 | 441 |
Endoplasmic Reticulum | 0 | 3 | 0 | 0 | 7 | 9 | 22 | 41 | 17 | 30 | 7 | 7 | 0 | 2 | 0 | 15 | 13 | 11 | 2 | 2 | 1 | 0 | 3 | 2 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 6 | 0 | 5 | 2 | 3 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Peroxisomes | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Vac/Vac Membrane | 2 | 0 | 1 | 0 | 1 | 7 | 3 | 16 | 1 | 2 | 2 | 10 | 0 | 0 | 1 | 0 | 2 | 3 | 2 | 6 | 0 | 5 | 3 | 2 |
Unique Cell Count | 422 | 690 | 230 | 205 | 243 | 273 | 287 | 418 | 318 | 314 | 170 | 150 | 408 | 511 | 532 | 295 | 268 | 202 | 412 | 679 | 214 | 427 | 453 | 470 |
Labelled Cell Count | 425 | 691 | 231 | 206 | 246 | 275 | 293 | 426 | 324 | 323 | 180 | 156 | 408 | 516 | 535 | 312 | 285 | 216 | 412 | 679 | 214 | 427 | 453 | 470 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 109.3 | 98.7 | 90.9 | 76.7 | 54.8 | 50.4 | 46.9 | 46.2 | 40.5 | 39.2 | 35.7 | 34.2 | 122.0 | 113.9 | 106.3 | 81.9 | 104.9 | 115.5 | 89.4 | 94.0 | 99.6 |
Std Deviation (1e-4) | 25.5 | 22.1 | 18.0 | 16.7 | 14.2 | 12.3 | 10.5 | 9.1 | 9.0 | 7.9 | 9.6 | 9.0 | 30.8 | 28.9 | 27.3 | 28.1 | 31.0 | 36.4 | 30.7 | 31.0 | 28.7 |
Intensity Change (Log2) | – | – | – | -0.24 | -0.73 | -0.85 | -0.96 | -0.98 | -1.17 | -1.21 | -1.35 | -1.41 | 0.43 | 0.33 | 0.23 | -0.15 | 0.21 | 0.35 | -0.02 | 0.05 | 0.13 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.9 | -2.5 | -3.6 | -4.5 | -5.9 | -4.3 | -5.0 | -4.9 | -6.5 | 1.3 | -0.3 | 0.6 | -0.4 | -0.4 | -1.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 4.3 | 4.9 | 3.6 | 4.8 | 0 | 0 | 0 | 0 | 0 | 3.5 | 3.4 | 3.6 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 2.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 84.2425 | 101.1161 | 97.0251 | 92.4355 | 75.2124 | 92.9827 | 85.883 | 101.1004 | 99.2473 | 82.2166 | 75.6708 | 95.2382 | 93.7699 | 103.9921 | 101.3314 | 98.5306 | 91.5104 | 94.9721 |
Actin | 0.0139 | 0.0001 | 0.0035 | 0.0003 | 0.0009 | 0.0002 | 0.0253 | 0.0012 | 0.0046 | 0.0471 | 0.0005 | 0.0038 | 0.0076 | 0.0001 | 0.0001 | 0 | 0.0003 | 0.0002 |
Bud | 0.0002 | 0 | 0.0004 | 0.0001 | 0.0009 | 0.0003 | 0.0011 | 0.0013 | 0.0011 | 0.0005 | 0.0002 | 0.0003 | 0.0003 | 0 | 0 | 0 | 0.0001 | 0.0001 |
Bud Neck | 0.0009 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0004 | 0.0006 | 0.0002 | 0.0002 | 0.0003 | 0.0003 | 0.0002 | 0.004 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0003 |
Bud Periphery | 0.0002 | 0 | 0.0004 | 0.0001 | 0.0006 | 0.0001 | 0.0012 | 0.0004 | 0.0004 | 0.0003 | 0.0002 | 0.0001 | 0.0003 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0.0005 | 0 | 0.0001 | 0.0004 | 0.0005 | 0 | 0.0017 | 0.0003 | 0.0002 | 0.0012 | 0.0003 | 0 | 0.0046 | 0 | 0 | 0 | 0.0003 | 0 |
Cell Periphery | 0.0001 | 0 | 0.0002 | 0 | 0.0011 | 0 | 0.0107 | 0.0001 | 0.0001 | 0.0005 | 0.0011 | 0 | 0.0007 | 0 | 0 | 0 | 0.0001 | 0 |
Cytoplasm | 0.8937 | 0.9964 | 0.9615 | 0.9486 | 0.7712 | 0.9771 | 0.8344 | 0.9871 | 0.9646 | 0.833 | 0.7631 | 0.9766 | 0.9298 | 0.9963 | 0.9917 | 0.9699 | 0.9173 | 0.9888 |
Cytoplasmic Foci | 0.0164 | 0.0001 | 0.0019 | 0.0172 | 0.0212 | 0.0003 | 0.0075 | 0.0005 | 0.0021 | 0.0144 | 0.0191 | 0.0006 | 0.0043 | 0.0001 | 0 | 0 | 0.0283 | 0.0004 |
Eisosomes | 0.0002 | 0 | 0 | 0.0001 | 0.0005 | 0 | 0.0012 | 0 | 0 | 0.0011 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0005 | 0.0001 | 0.0006 | 0.0002 | 0.0014 | 0.0025 | 0.0056 | 0.0002 | 0.0002 | 0.0009 | 0.0098 | 0.0003 | 0.0003 | 0 | 0 | 0 | 0.0007 | 0.0001 |
Endosome | 0.0013 | 0 | 0.0014 | 0.0005 | 0.0024 | 0.001 | 0.0139 | 0.0001 | 0.0018 | 0.0014 | 0.0043 | 0.0003 | 0.0017 | 0 | 0 | 0 | 0.0023 | 0.0001 |
Golgi | 0.0013 | 0 | 0.0004 | 0.0003 | 0.0006 | 0 | 0.0027 | 0 | 0.0032 | 0.0043 | 0.0005 | 0.0003 | 0.0005 | 0 | 0 | 0 | 0.0006 | 0 |
Lipid Particles | 0.0132 | 0 | 0.0016 | 0.0089 | 0.0192 | 0 | 0.0036 | 0 | 0.0016 | 0.0062 | 0.0012 | 0 | 0.0009 | 0 | 0 | 0 | 0.0087 | 0 |
Mitochondria | 0.0027 | 0 | 0.0014 | 0.0023 | 0.034 | 0.0005 | 0.0038 | 0.0001 | 0.0057 | 0.048 | 0.0006 | 0.0006 | 0.0006 | 0 | 0 | 0.0001 | 0.0013 | 0.0001 |
None | 0.0053 | 0.0001 | 0.0029 | 0.0029 | 0.0254 | 0.0001 | 0.0092 | 0.0004 | 0.0009 | 0.0185 | 0.0049 | 0.0003 | 0.0018 | 0.0001 | 0.0001 | 0.0001 | 0.0056 | 0.0002 |
Nuclear Periphery | 0.0066 | 0.0006 | 0.0041 | 0.0015 | 0.0149 | 0.005 | 0.0222 | 0.0014 | 0.0009 | 0.0026 | 0.014 | 0.0021 | 0.0036 | 0.0004 | 0.0007 | 0.0013 | 0.0046 | 0.0015 |
Nucleolus | 0.003 | 0 | 0.0019 | 0.0013 | 0.0309 | 0 | 0.0028 | 0.0001 | 0.0008 | 0.004 | 0.0068 | 0 | 0.0024 | 0 | 0 | 0 | 0.0026 | 0 |
Nucleus | 0.0274 | 0.0024 | 0.0108 | 0.0102 | 0.0327 | 0.0075 | 0.0338 | 0.0055 | 0.0067 | 0.0075 | 0.0299 | 0.0137 | 0.0273 | 0.0028 | 0.0071 | 0.0283 | 0.0151 | 0.0079 |
Peroxisomes | 0.0087 | 0 | 0.0006 | 0.0015 | 0.0018 | 0 | 0.0007 | 0 | 0.0025 | 0.0039 | 0.0002 | 0 | 0.0007 | 0 | 0 | 0 | 0.0006 | 0 |
Punctate Nuclear | 0.0026 | 0 | 0.0025 | 0.0027 | 0.0055 | 0 | 0.0134 | 0.0003 | 0.0001 | 0.0011 | 0.0825 | 0.0003 | 0.0038 | 0 | 0 | 0 | 0.0098 | 0.0001 |
Vacuole | 0.0008 | 0.0001 | 0.0017 | 0.0004 | 0.0108 | 0.0034 | 0.003 | 0.0006 | 0.0011 | 0.0014 | 0.0545 | 0.0002 | 0.0035 | 0 | 0 | 0.0001 | 0.0008 | 0.0002 |
Vacuole Periphery | 0.0006 | 0 | 0.0018 | 0.0003 | 0.0233 | 0.0016 | 0.0016 | 0.0001 | 0.001 | 0.0015 | 0.006 | 0.0001 | 0.0013 | 0 | 0 | 0 | 0.0007 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 145.5631 | 66.401 | 72.3192 | 52.3641 | 59.803 | 120.9361 | 72.0109 | 66.5087 | 70.3878 | 71.465 |
Translational Efficiency | 1.8207 | 1.9539 | 1.3867 | 1.7761 | 1.5801 | 1.9639 | 1.7965 | 1.7787 | 1.4785 | 1.7419 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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