Standard name | |
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Human Ortholog | |
Description | Ribosomal 60S subunit protein L19B; rpl19a and rpl19b single null mutations result in slow growth, while the double null mutation is lethal; homologous to mammalian ribosomal protein L19, no bacterial homolog; RPL19B has a paralog, RPL19A, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 3 | 2 | 3 | 7 | 14 | 8 | 13 | 7 | 11 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud | 1 | 1 | 0 | 1 | 0 | 0 | 3 | 3 | 1 | 3 | 3 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 1 | 7 | 16 | 18 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 3 | 0 | 0 | 4 | 9 | 10 | 16 | 19 | 7 | 16 | 4 | 18 | 6 | 19 | 22 | 3 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 137 | 155 | 174 | 185 | 237 | 227 | 278 | 339 | 144 | 193 | 148 | 145 | 397 | 546 | 477 | 267 | 234 | 231 | 138 | 147 | 166 | 290 | 406 | 402 |
Endoplasmic Reticulum | 6 | 5 | 5 | 11 | 8 | 13 | 15 | 61 | 17 | 22 | 12 | 18 | 18 | 14 | 2 | 13 | 16 | 9 | 2 | 1 | 3 | 9 | 5 | 10 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Golgi | 1 | 0 | 0 | 5 | 0 | 6 | 8 | 14 | 5 | 7 | 6 | 6 | 0 | 6 | 6 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 1 | 0 | 1 | 1 | 0 | 10 | 10 | 8 | 9 | 11 | 4 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 |
Vac/Vac Membrane | 0 | 0 | 2 | 3 | 10 | 4 | 3 | 16 | 11 | 11 | 11 | 9 | 3 | 3 | 1 | 1 | 1 | 1 | 0 | 5 | 4 | 5 | 5 | 3 |
Unique Cell Count | 140 | 160 | 180 | 201 | 258 | 252 | 319 | 428 | 179 | 248 | 191 | 187 | 409 | 568 | 485 | 273 | 234 | 232 | 145 | 163 | 180 | 323 | 449 | 444 |
Labelled Cell Count | 148 | 162 | 181 | 213 | 268 | 263 | 341 | 477 | 201 | 276 | 204 | 213 | 428 | 588 | 509 | 286 | 252 | 242 | 145 | 163 | 180 | 323 | 449 | 444 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 63.7 | 80.1 | 59.9 | 66.2 | 49.3 | 35.8 | 31.3 | 28.5 | 25.0 | 25.6 | 24.6 | 27.0 | 60.5 | 58.1 | 57.0 | 175.4 | 180.3 | 172.1 | 63.9 | 64.0 | 64.1 |
Std Deviation (1e-4) | 35.2 | 50.8 | 35.0 | 38.2 | 27.7 | 20.7 | 17.3 | 15.5 | 14.2 | 13.7 | 14.0 | 14.7 | 38.8 | 36.6 | 35.5 | 55.6 | 60.8 | 61.4 | 40.7 | 40.5 | 40.4 |
Intensity Change (Log2) | – | – | – | 0.14 | -0.28 | -0.74 | -0.94 | -1.07 | -1.26 | -1.23 | -1.28 | -1.15 | 0.01 | -0.04 | -0.07 | 1.55 | 1.59 | 1.52 | 0.09 | 0.1 | 0.1 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 3.1 | 0 | 3.3 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 3.1 | 2.9 | 0 | 3.5 | 0 | 4.3 | 0 | 0 | 2.9 | 0 | 0 | 0 |
Cytoplasm | -1.9 | -2.1 | -2.6 | -3.5 | -5.4 | -4.8 | -5.5 | -5.5 | -5.4 | 0.3 | -0.3 | 1.3 | 0.7 | 2.8 | 2.3 |
Endoplasmic Reticulum | 1.3 | 0.2 | 1.2 | 1.1 | 4.2 | 2.7 | 2.6 | 1.6 | 2.7 | 0.9 | 0 | 0 | 1.1 | 1.9 | 0.6 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 1.7 | 2.6 | 2.0 | 2.4 | 2.1 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 60.7286 | 77.9037 | 74.6911 | 61.8647 | 59.9554 | 77.082 | 53.7733 | 63.1834 | 58.596 | 57.3699 | 42.8054 | 57.3033 | 70.6352 | 88.2791 | 73.6984 | 73.6897 | 70.5594 | 88.3153 |
Actin | 0.0008 | 0.003 | 0.0006 | 0.0001 | 0.0008 | 0.0007 | 0.0022 | 0.0001 | 0.0022 | 0.0001 | 0.0027 | 0.0093 | 0.0005 | 0.0014 | 0.0006 | 0.0004 | 0.0034 | 0.0021 |
Bud | 0.0022 | 0.0042 | 0.0039 | 0.0011 | 0.0013 | 0.0012 | 0.0022 | 0.0004 | 0.0012 | 0.0002 | 0.0006 | 0.0011 | 0.0021 | 0.0032 | 0.0037 | 0.005 | 0.0059 | 0.0022 |
Bud Neck | 0.0004 | 0.0006 | 0.001 | 0.0006 | 0.0006 | 0.0012 | 0.0005 | 0.0002 | 0.0036 | 0.0002 | 0.0004 | 0.0016 | 0.0004 | 0.0003 | 0.001 | 0.0005 | 0.0008 | 0.0024 |
Bud Periphery | 0.0023 | 0.0032 | 0.0018 | 0.0008 | 0.0007 | 0.0008 | 0.0017 | 0.0007 | 0.0025 | 0.0001 | 0.0009 | 0.0005 | 0.0015 | 0.0011 | 0.0015 | 0.0052 | 0.0022 | 0.002 |
Bud Site | 0.001 | 0.0054 | 0.002 | 0.0003 | 0.0004 | 0.0002 | 0.0023 | 0.0002 | 0.0009 | 0.0001 | 0.0005 | 0.0001 | 0.0004 | 0.0041 | 0.0008 | 0.0005 | 0.0013 | 0.0002 |
Cell Periphery | 0.0219 | 0.0083 | 0.0128 | 0.0144 | 0.0111 | 0.0085 | 0.0052 | 0.001 | 0.0031 | 0.0007 | 0.0006 | 0.0013 | 0.0128 | 0.0043 | 0.0095 | 0.0017 | 0.0025 | 0.0065 |
Cytoplasm | 0.7802 | 0.9232 | 0.8699 | 0.8117 | 0.8186 | 0.8485 | 0.8384 | 0.9813 | 0.9283 | 0.9056 | 0.812 | 0.9193 | 0.8303 | 0.9468 | 0.8922 | 0.8327 | 0.8868 | 0.842 |
Cytoplasmic Foci | 0.0064 | 0.0017 | 0.0031 | 0.0027 | 0.0117 | 0.0069 | 0.0124 | 0.001 | 0.0041 | 0.0038 | 0.0388 | 0.006 | 0.0039 | 0.0045 | 0.004 | 0.0052 | 0.0057 | 0.0048 |
Eisosomes | 0.0003 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0.0003 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0224 | 0.0079 | 0.0041 | 0.0111 | 0.0048 | 0.0481 | 0.0191 | 0.0029 | 0.0093 | 0.0215 | 0.0076 | 0.0067 | 0.033 | 0.0031 | 0.0114 | 0.0027 | 0.0058 | 0.0347 |
Endosome | 0.0095 | 0.0022 | 0.007 | 0.0037 | 0.0415 | 0.0159 | 0.019 | 0.0011 | 0.0061 | 0.034 | 0.0291 | 0.0149 | 0.0132 | 0.004 | 0.0099 | 0.0086 | 0.0155 | 0.0165 |
Golgi | 0.0012 | 0.0003 | 0.0007 | 0.0002 | 0.0052 | 0.0031 | 0.0045 | 0.0002 | 0.0007 | 0.0015 | 0.0062 | 0.0031 | 0.0014 | 0.0013 | 0.0007 | 0.0002 | 0.001 | 0.002 |
Lipid Particles | 0.0023 | 0.0005 | 0.0013 | 0.0023 | 0.0022 | 0.0011 | 0.0072 | 0.0002 | 0.0006 | 0.0003 | 0.0225 | 0.0006 | 0.0013 | 0.0007 | 0.001 | 0.0002 | 0.0007 | 0.0014 |
Mitochondria | 0.0067 | 0.0005 | 0.0018 | 0.0006 | 0.0018 | 0.0015 | 0.0174 | 0.0002 | 0.0019 | 0.0004 | 0.0298 | 0.0025 | 0.0016 | 0.0008 | 0.0011 | 0.0019 | 0.0006 | 0.0012 |
None | 0.0059 | 0.0007 | 0.0011 | 0.0007 | 0.0013 | 0.0009 | 0.0048 | 0.0002 | 0.0012 | 0.0003 | 0.0092 | 0.0009 | 0.0008 | 0.0005 | 0.0011 | 0.0014 | 0.0005 | 0.0007 |
Nuclear Periphery | 0.0076 | 0.0017 | 0.0035 | 0.0047 | 0.0061 | 0.0061 | 0.0039 | 0.0007 | 0.0024 | 0.0024 | 0.005 | 0.0015 | 0.0165 | 0.0012 | 0.0052 | 0.0048 | 0.0031 | 0.02 |
Nucleolus | 0.0099 | 0.0002 | 0.0006 | 0.003 | 0.0045 | 0.0004 | 0.002 | 0.0001 | 0.0005 | 0.0001 | 0.0048 | 0.0003 | 0.0005 | 0.0003 | 0.0008 | 0.0084 | 0.0002 | 0.0005 |
Nucleus | 0.0063 | 0.0019 | 0.0033 | 0.0052 | 0.0059 | 0.0026 | 0.004 | 0.0006 | 0.0032 | 0.0012 | 0.0043 | 0.0014 | 0.0036 | 0.0014 | 0.0053 | 0.0058 | 0.0021 | 0.0045 |
Peroxisomes | 0.0003 | 0.0001 | 0.0006 | 0.0001 | 0.0001 | 0.0001 | 0.0019 | 0 | 0.0002 | 0 | 0.0015 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 |
Punctate Nuclear | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0.0003 | 0.0018 | 0 | 0.0001 | 0 | 0.0032 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 |
Vacuole | 0.096 | 0.0317 | 0.0736 | 0.118 | 0.0607 | 0.04 | 0.0409 | 0.0073 | 0.0239 | 0.0232 | 0.0133 | 0.0222 | 0.0617 | 0.0183 | 0.0427 | 0.0862 | 0.0495 | 0.0411 |
Vacuole Periphery | 0.0162 | 0.0026 | 0.0071 | 0.0186 | 0.0207 | 0.0118 | 0.0084 | 0.0017 | 0.0041 | 0.0042 | 0.0065 | 0.0064 | 0.0143 | 0.0026 | 0.0071 | 0.0284 | 0.0119 | 0.015 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 2644.2991 | 3081.9929 | 3550.5204 | 2529.0617 | 3326.8006 | 3242.6001 | 2498.5589 | 2319.3339 | 2808.7746 | 2192.9477 |
Translational Efficiency | 1.244 | 1.1436 | 1.0321 | 1.5378 | 1.3204 | 1.0668 | 1.1736 | 1.438 | 1.1096 | 1.4799 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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