Standard name | |
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Human Ortholog | |
Description | Protein involved in regulating endocytosis of plasma membrane proteins; identified as a substrate for ubiquitination by Rsp5p and deubiquitination by Ubp2p; promoter contains several Gcn4p binding elements; ECM21 has a paralog, CSR2, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
Bud | 0 | 0 | 6 | 3 | 2 | 5 | 11 | 5 | 5 | 3 | 5 | 9 | 1 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 4 | 9 | 14 | 8 | 10 | 8 | 13 | 12 | 12 | 20 | 11 | 19 | 33 | 51 | 71 | 18 | 10 | 14 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 77 | 281 | 213 | 132 | 167 | 214 | 301 | 261 | 261 | 181 | 110 | 125 | 171 | 185 | 180 | 112 | 82 | 105 | 91 | 291 | 226 | 97 | 129 | 175 |
Endoplasmic Reticulum | 2 | 5 | 0 | 1 | 1 | 2 | 1 | 3 | 2 | 5 | 0 | 3 | 1 | 2 | 1 | 2 | 3 | 2 | 0 | 1 | 2 | 2 | 3 | 3 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 6 | 2 | 12 | 10 | 38 | 74 | 59 | 59 | 80 | 55 | 79 | 0 | 0 | 0 | 3 | 0 | 2 | 0 | 4 | 2 | 0 | 0 | 0 |
Nucleus | 0 | 4 | 0 | 1 | 0 | 1 | 3 | 1 | 1 | 2 | 4 | 2 | 1 | 1 | 0 | 4 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 2 | 0 | 0 | 1 | 0 | 1 | 4 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 6 | 1 | 4 | 0 | 5 | 3 | 0 | 0 | 1 |
Unique Cell Count | 80 | 294 | 215 | 134 | 174 | 231 | 338 | 299 | 298 | 229 | 145 | 175 | 173 | 189 | 183 | 123 | 93 | 110 | 95 | 313 | 243 | 105 | 140 | 186 |
Labelled Cell Count | 83 | 307 | 235 | 158 | 191 | 269 | 408 | 347 | 343 | 291 | 188 | 240 | 207 | 239 | 254 | 145 | 98 | 130 | 95 | 313 | 243 | 105 | 140 | 186 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 9.2 | 7.8 | 5.6 | 5.5 | 5.5 | 5.1 | 4.7 | 4.7 | 4.7 | 4.1 | 4.2 | 4.0 | 8.9 | 8.9 | 8.0 | 13.7 | 14.2 | 15.2 | 7.9 | 9.4 | 10.1 |
Std Deviation (1e-4) | 1.2 | 1.2 | 0.6 | 0.9 | 0.9 | 0.9 | 1.1 | 1.0 | 1.0 | 0.9 | 1.0 | 0.9 | 1.2 | 1.2 | 1.1 | 2.6 | 3.4 | 2.4 | 1.4 | 1.6 | 1.7 |
Intensity Change (Log2) | – | – | – | -0.02 | -0.01 | -0.13 | -0.25 | -0.24 | -0.24 | -0.45 | -0.42 | -0.5 | 0.67 | 0.68 | 0.51 | 1.29 | 1.35 | 1.44 | 0.5 | 0.75 | 0.85 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | -0.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -0.2 | -0.3 | -1.5 | 0 | 0 | 0 | 0 | 0 | 0 | 3.8 | 5.6 | 7.8 | 2.5 | 1.3 | 1.9 |
Cytoplasm | -0.5 | -2.0 | -3.4 | -4.5 | -4.9 | -4.8 | -6.7 | -7.1 | -8.0 | -0.2 | -1.0 | -0.6 | -3.7 | -4.4 | -2.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 3.7 | 2.7 | 5.7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.5264 | 5.8543 | 5.102 | 5.0423 | 4.1311 | 5.4014 | 6.6842 | 7.7093 | 7.4455 | 6.8011 | 7.4622 | 7.3904 | 7.2897 | 7.8938 | 7.4702 | 8.2628 | 6.6313 | 7.7576 |
Actin | 0.1053 | 0.0046 | 0.0156 | 0.0586 | 0.0086 | 0.0048 | 0.0558 | 0.0044 | 0.0264 | 0.0426 | 0.0186 | 0.0059 | 0.0231 | 0.0033 | 0.0032 | 0.0044 | 0.0003 | 0.0168 |
Bud | 0.0014 | 0.0003 | 0.0005 | 0.0009 | 0.002 | 0.0006 | 0.003 | 0.0096 | 0.0027 | 0.0019 | 0.0016 | 0.003 | 0.0005 | 0.0002 | 0.0004 | 0.0005 | 0.0002 | 0.0021 |
Bud Neck | 0.003 | 0.0006 | 0.0009 | 0.0008 | 0.0039 | 0.0009 | 0.0054 | 0.0004 | 0.0034 | 0.0009 | 0.0012 | 0.0032 | 0.0007 | 0.0004 | 0.0005 | 0.0007 | 0.0006 | 0.0055 |
Bud Periphery | 0.0023 | 0.0002 | 0.0008 | 0.0017 | 0.0013 | 0.0006 | 0.0043 | 0.0037 | 0.0026 | 0.0038 | 0.0014 | 0.0015 | 0.0008 | 0.0002 | 0.0004 | 0.0004 | 0.0001 | 0.002 |
Bud Site | 0.0047 | 0.0187 | 0.0097 | 0.0006 | 0.0213 | 0.0006 | 0.0222 | 0.0229 | 0.0196 | 0.0039 | 0.0047 | 0.0012 | 0.0029 | 0.0066 | 0.0025 | 0.0006 | 0.0002 | 0.0005 |
Cell Periphery | 0.0014 | 0.0024 | 0.0016 | 0.0014 | 0.0007 | 0.0001 | 0.0025 | 0.0021 | 0.0021 | 0.0009 | 0.0005 | 0.0009 | 0.0025 | 0.0019 | 0.0023 | 0.0009 | 0.0001 | 0.0007 |
Cytoplasm | 0.6342 | 0.9555 | 0.934 | 0.9056 | 0.7681 | 0.9342 | 0.5449 | 0.9007 | 0.826 | 0.7972 | 0.6705 | 0.936 | 0.8029 | 0.9749 | 0.9437 | 0.9682 | 0.9788 | 0.9369 |
Cytoplasmic Foci | 0.0453 | 0.0033 | 0.0033 | 0.0034 | 0.0358 | 0.0035 | 0.0255 | 0.0072 | 0.0098 | 0.0121 | 0.0513 | 0.0082 | 0.024 | 0.0029 | 0.0043 | 0.0044 | 0.0035 | 0.0065 |
Eisosomes | 0.0041 | 0 | 0.0001 | 0.0003 | 0.0001 | 0 | 0.0005 | 0.0001 | 0.0015 | 0.0003 | 0.0002 | 0 | 0.0005 | 0 | 0.0002 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0182 | 0.0054 | 0.0031 | 0.0048 | 0.0028 | 0.0032 | 0.0278 | 0.0073 | 0.0071 | 0.0043 | 0.0096 | 0.0065 | 0.009 | 0.0027 | 0.0033 | 0.0037 | 0.0035 | 0.0124 |
Endosome | 0.0289 | 0.0019 | 0.0041 | 0.0053 | 0.0498 | 0.0187 | 0.0429 | 0.0067 | 0.022 | 0.035 | 0.0529 | 0.0031 | 0.0184 | 0.0008 | 0.0023 | 0.0029 | 0.0059 | 0.006 |
Golgi | 0.0116 | 0.0009 | 0.0054 | 0.0035 | 0.0168 | 0.0052 | 0.0153 | 0.0018 | 0.0064 | 0.0142 | 0.0214 | 0.0011 | 0.0193 | 0.0006 | 0.0008 | 0.0005 | 0.0003 | 0.0047 |
Lipid Particles | 0.0199 | 0.0003 | 0.0027 | 0.0003 | 0.0076 | 0.0007 | 0.0074 | 0.0009 | 0.0048 | 0.0023 | 0.0031 | 0.0004 | 0.0034 | 0.0003 | 0.0003 | 0.0003 | 0 | 0.0004 |
Mitochondria | 0.0331 | 0.0001 | 0.0056 | 0.0018 | 0.0141 | 0.0109 | 0.0083 | 0.0005 | 0.0041 | 0.0138 | 0.0064 | 0.0005 | 0.0111 | 0 | 0.0001 | 0 | 0.0002 | 0.0005 |
None | 0.0162 | 0.0038 | 0.007 | 0.0028 | 0.0296 | 0.0015 | 0.1195 | 0.0257 | 0.0351 | 0.037 | 0.0798 | 0.0234 | 0.0374 | 0.0037 | 0.0335 | 0.0088 | 0.0027 | 0.0031 |
Nuclear Periphery | 0.0283 | 0.0003 | 0.0007 | 0.0019 | 0.0155 | 0.0018 | 0.0223 | 0.0008 | 0.0031 | 0.0025 | 0.0311 | 0.0005 | 0.017 | 0.0002 | 0.0003 | 0.0004 | 0.0007 | 0.0002 |
Nucleolus | 0.0006 | 0 | 0.0002 | 0 | 0.0012 | 0.0001 | 0.002 | 0.0002 | 0.0005 | 0.0004 | 0.0003 | 0.0002 | 0.0003 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0.0047 | 0.0004 | 0.0008 | 0.0009 | 0.0038 | 0.0009 | 0.0288 | 0.0013 | 0.0029 | 0.0021 | 0.0112 | 0.0014 | 0.0133 | 0.0004 | 0.0004 | 0.0005 | 0.0007 | 0.0003 |
Peroxisomes | 0.0232 | 0 | 0.0007 | 0.0001 | 0.005 | 0.0008 | 0.0171 | 0.0002 | 0.0036 | 0.0009 | 0.0236 | 0.0002 | 0.0081 | 0 | 0.0001 | 0 | 0 | 0.0007 |
Punctate Nuclear | 0.0073 | 0.0001 | 0.0008 | 0.0002 | 0.0047 | 0.0001 | 0.0287 | 0.0011 | 0.0009 | 0.0004 | 0.0053 | 0.0009 | 0.0014 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 |
Vacuole | 0.0027 | 0.001 | 0.0017 | 0.0045 | 0.0053 | 0.0058 | 0.0131 | 0.0021 | 0.012 | 0.0198 | 0.0031 | 0.0016 | 0.0023 | 0.0007 | 0.0013 | 0.0026 | 0.0015 | 0.0007 |
Vacuole Periphery | 0.0038 | 0.0001 | 0.0006 | 0.0005 | 0.0023 | 0.0049 | 0.0026 | 0.0002 | 0.0033 | 0.0036 | 0.0023 | 0.0002 | 0.0012 | 0 | 0.0001 | 0.0001 | 0.0004 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 16.7781 | 15.5867 | 17.6764 | 24.2508 | 13.2227 | 19.3992 | 23.3423 | 29.803 | 29.5424 | 23.6994 |
Translational Efficiency | 0.4009 | 0.4323 | 0.5717 | 0.4497 | 0.4556 | 0.6068 | 0.5423 | 0.4508 | 0.5273 | 0.4513 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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