Standard name | |
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Human Ortholog | |
Description | Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S11 and bacterial S17; RPS11B has a paralog, RPS11A, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | – | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 |
Bud | 1 | 0 | – | 0 | 0 | 1 | 4 | 4 | 2 | 6 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 4 |
Bud Neck | 0 | 0 | – | 2 | 6 | 0 | 8 | 12 | 4 | 6 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
Bud Site | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | – | 1 | 0 | 3 | 0 | 4 | 2 | 1 | 1 | 4 | 2 | 2 | 1 | 6 | 5 | 7 | 0 | 0 | 0 | 1 | 2 | 0 |
Cytoplasm | 49 | 15 | – | 120 | 213 | 295 | 503 | 376 | 169 | 174 | 79 | 110 | 175 | 342 | 365 | 222 | 72 | 249 | 50 | 31 | 16 | 104 | 165 | 211 |
Endoplasmic Reticulum | 0 | 0 | – | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 9 | 6 | 10 | 0 | 0 | 0 | 1 | 3 | 3 |
Endosome | 0 | 0 | – | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 2 | 1 |
Golgi | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 7 | 1 | – | 1 | 0 | 10 | 47 | 36 | 64 | 37 | 93 | 59 | 0 | 0 | 0 | 2 | 0 | 3 | 4 | 2 | 2 | 7 | 16 | 21 |
Nucleus | 0 | 0 | – | 0 | 0 | 0 | 1 | 4 | 3 | 0 | 3 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
Nucleolus | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
SpindlePole | 0 | 0 | – | 0 | 1 | 2 | 5 | 5 | 2 | 1 | 2 | 6 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 2 |
Vac/Vac Membrane | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 3 | 3 | 2 | 1 | 1 | 0 | 8 | 13 | 14 |
Unique Cell Count | 53 | 16 | 120 | 216 | 300 | 523 | 402 | 194 | 190 | 141 | 147 | 176 | 343 | 366 | 226 | 73 | 257 | 60 | 37 | 22 | 134 | 223 | 274 | |
Labelled Cell Count | 57 | 16 | 124 | 221 | 312 | 571 | 444 | 246 | 226 | 183 | 184 | 179 | 348 | 367 | 244 | 86 | 277 | 60 | 37 | 22 | 134 | 223 | 274 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 2.9 | 3.4 | – | 5.1 | 4.8 | 4.0 | 3.7 | 4.1 | 3.6 | 3.8 | 3.6 | 3.8 | 5.3 | 5.3 | 5.3 | 6.6 | 7.0 | 7.0 | 4.7 | 5.0 | 5.3 |
Std Deviation (1e-4) | 0.2 | 0.6 | – | 2.2 | 1.5 | 1.5 | 1.5 | 1.2 | 1.7 | 1.7 | 1.7 | 1.1 | 1.5 | 1.4 | 1.5 | 1.3 | 1.6 | 1.9 | 1.8 | 1.8 | 2.1 |
Intensity Change (Log2) | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 1.819 | 1.3911 | 2.033 | 0.545 | 3.5478 | 1.3948 | 1.106 | 1.7997 | 1.7407 | 1.3536 | 0.183 | 1.6983 | -0.0948 | 1.3067 | 0.9397 | 0.6995 | 0.2096 | 0.4831 |
Actin | 0.001 | 0.0025 | 0.0064 | 0.0082 | 0.2167 | 0.0149 | 0.009 | 0.0005 | 0.0011 | 0.0001 | 0.0004 | 0.0003 | 0.0274 | 0.0209 | 0.0725 | 0.0369 | 0.0001 | 0.0064 |
Bud | 0.0025 | 0.0533 | 0.0342 | 0.0407 | 0.0079 | 0.0069 | 0.0005 | 0.0003 | 0.0013 | 0.0002 | 0.0005 | 0.0001 | 0.0005 | 0.0007 | 0.0041 | 0.0046 | 0.0001 | 0.0002 |
Bud Neck | 0.0003 | 0.0007 | 0.0037 | 0.019 | 0.0026 | 0.001 | 0.0084 | 0.0002 | 0.0005 | 0.0003 | 0.0003 | 0.0006 | 0.0012 | 0.0004 | 0.0042 | 0.0021 | 0.0002 | 0.0007 |
Bud Periphery | 0.0033 | 0.0099 | 0.0096 | 0.0723 | 0.0123 | 0.0237 | 0.0006 | 0.0004 | 0.0015 | 0.0001 | 0.0008 | 0.0001 | 0.0005 | 0.0004 | 0.0054 | 0.0049 | 0.0001 | 0.0001 |
Bud Site | 0.0022 | 0.0543 | 0.0552 | 0.0096 | 0.0648 | 0.0045 | 0.0194 | 0.0016 | 0.0245 | 0.0001 | 0.0013 | 0.0002 | 0.0035 | 0.0172 | 0.1049 | 0.0207 | 0.0002 | 0.0001 |
Cell Periphery | 0.0011 | 0.0023 | 0.0011 | 0.0024 | 0.0032 | 0.0016 | 0.0022 | 0.0007 | 0.0009 | 0.0001 | 0.0012 | 0.0001 | 0.0003 | 0.0011 | 0.0012 | 0.0007 | 0.0001 | 0.0001 |
Cytoplasm | 0.408 | 0.4129 | 0.528 | 0.1595 | 0.0025 | 0.5073 | 0.4629 | 0.7241 | 0.62 | 0.6632 | 0.5731 | 0.8496 | 0.3619 | 0.7372 | 0.4427 | 0.594 | 0.6484 | 0.8092 |
Cytoplasmic Foci | 0.0182 | 0.0256 | 0.0195 | 0.1454 | 0.1566 | 0.0201 | 0.0654 | 0.0212 | 0.0484 | 0.0371 | 0.0303 | 0.0196 | 0.0583 | 0.0258 | 0.0342 | 0.0401 | 0.038 | 0.013 |
Eisosomes | 0.0005 | 0.0002 | 0.0002 | 0.0002 | 0.0047 | 0.0002 | 0.0005 | 0.0001 | 0.0003 | 0 | 0.0002 | 0 | 0.0003 | 0.0003 | 0.0006 | 0.0002 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0157 | 0.0034 | 0.0024 | 0.0057 | 0.0005 | 0.0164 | 0.02 | 0.0092 | 0.0073 | 0.0018 | 0.0347 | 0.0075 | 0.0208 | 0.0051 | 0.0266 | 0.0074 | 0.0119 | 0.0105 |
Endosome | 0.0691 | 0.0247 | 0.019 | 0.1188 | 0.0371 | 0.0551 | 0.0584 | 0.0229 | 0.0491 | 0.0551 | 0.1098 | 0.0355 | 0.0589 | 0.0243 | 0.0544 | 0.1655 | 0.1751 | 0.0906 |
Golgi | 0.0026 | 0.0028 | 0.0019 | 0.0435 | 0.0491 | 0.0048 | 0.0069 | 0.0021 | 0.0029 | 0.0005 | 0.0048 | 0.008 | 0.0094 | 0.0038 | 0.0137 | 0.0437 | 0.0028 | 0.0049 |
Lipid Particles | 0.0123 | 0.001 | 0.0009 | 0.0029 | 0.0289 | 0.0091 | 0.0395 | 0.0015 | 0.0037 | 0.0002 | 0.006 | 0.0034 | 0.0302 | 0.0021 | 0.0052 | 0.0148 | 0.002 | 0.0023 |
Mitochondria | 0.0085 | 0.0029 | 0.0027 | 0.0058 | 0.1822 | 0.0052 | 0.0071 | 0.0031 | 0.0011 | 0.0003 | 0.0053 | 0.0015 | 0.0043 | 0.0017 | 0.0202 | 0.0309 | 0.0009 | 0.0016 |
None | 0.3454 | 0.3764 | 0.2974 | 0.312 | 0.0011 | 0.2801 | 0.2238 | 0.2006 | 0.2169 | 0.2272 | 0.1741 | 0.0609 | 0.1621 | 0.1357 | 0.1875 | 0.0009 | 0.0699 | 0.0183 |
Nuclear Periphery | 0.0188 | 0.0013 | 0.0007 | 0.0044 | 0.0003 | 0.0134 | 0.0118 | 0.0014 | 0.0019 | 0.0009 | 0.0069 | 0.0012 | 0.035 | 0.0012 | 0.0017 | 0.0014 | 0.0049 | 0.0255 |
Nucleolus | 0.002 | 0.0024 | 0.0013 | 0.0019 | 0.0004 | 0.001 | 0.0031 | 0.0002 | 0.0008 | 0.0001 | 0.0004 | 0.0001 | 0.0061 | 0.0003 | 0.0004 | 0.0004 | 0.0002 | 0.0003 |
Nucleus | 0.0184 | 0.0086 | 0.0033 | 0.0088 | 0.0004 | 0.0047 | 0.0115 | 0.0009 | 0.0028 | 0.0013 | 0.0025 | 0.0033 | 0.0967 | 0.002 | 0.0013 | 0.0011 | 0.007 | 0.0035 |
Peroxisomes | 0.0011 | 0.0007 | 0.0011 | 0.009 | 0.2238 | 0.001 | 0.0103 | 0.0002 | 0.0009 | 0.0001 | 0.0003 | 0.0007 | 0.0357 | 0.002 | 0.0093 | 0.0109 | 0.0002 | 0.0003 |
Punctate Nuclear | 0.0042 | 0.0046 | 0.0009 | 0.0043 | 0.0024 | 0.0113 | 0.025 | 0.0005 | 0.0019 | 0.0004 | 0.0006 | 0.0011 | 0.075 | 0.0113 | 0.0013 | 0.0007 | 0.0011 | 0.0057 |
Vacuole | 0.0514 | 0.0083 | 0.0097 | 0.0215 | 0.0015 | 0.0147 | 0.0112 | 0.0066 | 0.011 | 0.0091 | 0.0406 | 0.0054 | 0.0087 | 0.0061 | 0.0065 | 0.0147 | 0.0314 | 0.0046 |
Vacuole Periphery | 0.0134 | 0.0011 | 0.001 | 0.0041 | 0.0008 | 0.0029 | 0.0026 | 0.0018 | 0.0013 | 0.0019 | 0.0058 | 0.0008 | 0.0033 | 0.0006 | 0.0019 | 0.0034 | 0.0054 | 0.0021 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 1757.0134 | 1815.6861 | 1962.7011 | 1929.269 | 1971.268 | 1430.5879 | 1677.5581 | 1509.1752 | 1537.5083 | 1642.1759 |
Translational Efficiency | 1.4371 | 1.3845 | 1.3219 | 1.0782 | 1.5362 | 1.9087 | 1.2698 | 1.4625 | 1.4035 | 1.5239 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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