Standard name | |
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Human Ortholog | |
Description | Subunit B of V1 peripheral membrane domain of vacuolar H+-ATPase; electrogenic proton pump found throughout the endomembrane system; contains nucleotide binding sites; also detected in the cytoplasm; protein abundance increases in response to DNA replication stress; human homolog ATP6V1B1, implicated in autosomal-recessive distal renal tubular acidosis (RTA) with sensorineural deafness, complements yeast null mutant |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 2 | 3 | 6 | 5 | 22 | 31 | 19 | 33 | 26 | 47 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 |
Bud | 1 | 0 | 1 | 2 | 0 | 0 | 3 | 6 | 2 | 3 | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 8 | 5 | 2 | 1 | 2 | 5 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 1 | 1 | 3 | 12 | 27 | 22 | 13 | 37 | 29 | 45 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 135 | 154 | 102 | 130 | 145 | 149 | 195 | 161 | 176 | 194 | 192 | 160 | 37 | 20 | 33 | 88 | 92 | 56 | 42 | 53 | 8 | 4 | 3 | 0 |
Endoplasmic Reticulum | 16 | 16 | 24 | 19 | 24 | 47 | 137 | 196 | 80 | 117 | 51 | 70 | 2 | 4 | 14 | 9 | 8 | 5 | 7 | 3 | 10 | 0 | 2 | 0 |
Endosome | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 9 | 15 | 39 | 9 | 12 | 16 |
Golgi | 18 | 3 | 179 | 108 | 143 | 77 | 99 | 105 | 50 | 91 | 58 | 103 | 42 | 34 | 74 | 39 | 81 | 53 | 1 | 1 | 3 | 2 | 0 | 6 |
Mitochondria | 0 | 0 | 0 | 2 | 1 | 12 | 22 | 14 | 13 | 37 | 70 | 59 | 0 | 0 | 0 | 5 | 5 | 2 | 0 | 1 | 2 | 0 | 0 | 1 |
Nucleus | 0 | 1 | 0 | 0 | 4 | 1 | 1 | 0 | 3 | 0 | 0 | 4 | 0 | 0 | 5 | 4 | 0 | 1 | 43 | 42 | 8 | 18 | 24 | 21 |
Nuclear Periphery | 1 | 0 | 2 | 0 | 1 | 7 | 11 | 14 | 7 | 7 | 3 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 12 | 62 | 8 | 11 | 10 |
Nucleolus | 4 | 5 | 14 | 8 | 10 | 9 | 16 | 14 | 0 | 10 | 2 | 2 | 4 | 3 | 2 | 6 | 9 | 3 | 9 | 6 | 7 | 9 | 10 | 11 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 1 | 0 | 1 |
Vac/Vac Membrane | 392 | 294 | 487 | 190 | 278 | 242 | 248 | 197 | 166 | 198 | 154 | 187 | 275 | 299 | 381 | 207 | 214 | 167 | 479 | 455 | 553 | 188 | 320 | 373 |
Unique Cell Count | 530 | 458 | 635 | 384 | 509 | 513 | 684 | 662 | 473 | 618 | 515 | 559 | 305 | 324 | 428 | 306 | 319 | 230 | 626 | 606 | 709 | 246 | 390 | 452 |
Labelled Cell Count | 567 | 473 | 812 | 463 | 616 | 561 | 781 | 760 | 529 | 727 | 588 | 688 | 360 | 361 | 510 | 360 | 411 | 288 | 626 | 606 | 709 | 246 | 390 | 452 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 66.7 | 69.1 | 50.6 | 49.1 | 45.6 | 38.1 | 36.2 | 33.9 | 34.6 | 32.0 | 32.0 | 32.0 | 65.5 | 63.5 | 64.9 | 39.9 | 49.8 | 58.3 | 59.9 | 65.7 | 69.2 |
Std Deviation (1e-4) | 14.9 | 17.1 | 13.4 | 11.0 | 12.1 | 10.1 | 10.0 | 8.3 | 8.3 | 7.7 | 8.5 | 7.8 | 15.3 | 14.8 | 15.8 | 15.7 | 19.5 | 20.2 | 16.6 | 18.0 | 20.5 |
Intensity Change (Log2) | – | – | – | -0.04 | -0.15 | -0.41 | -0.48 | -0.58 | -0.55 | -0.66 | -0.66 | -0.66 | 0.37 | 0.33 | 0.36 | -0.34 | -0.02 | 0.2 | 0.24 | 0.38 | 0.45 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 3.9 | 5.0 | 4.5 | 5.4 | 5.2 | 7.0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 3.5 | 4.8 | 4.3 | 3.8 | 6.0 | 5.8 | 7.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 6.6 | 5.1 | 5.3 | 5.4 | 3.7 | 8.0 | 6.4 | 8.2 | 5.2 | -1.6 | -4.3 | -4.0 | 4.5 | 4.6 | 2.8 |
Endoplasmic Reticulum | 0.9 | 0.8 | 3.8 | 9.0 | 12.4 | 7.4 | 8.5 | 4.2 | 5.6 | -2.7 | -2.2 | -0.4 | -0.7 | -1.0 | -1.2 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | -5.3 | -6.1 | -5.4 | -7.2 | -5.8 | -7.1 | -4.0 | -4.9 | -6.2 | -4.1 | -5.3 | -0.9 | -1.5 |
Mitochondria | 0 | 0 | 3.9 | 4.6 | 3.7 | 4.2 | 6.3 | 9.6 | 8.4 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 2.4 | 2.9 | 0 | 0 | 0 | 2.5 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | -0.1 | -0.3 | -0.5 | 0.2 | -0.1 | -3.2 | -0.8 | -2.6 | -2.8 | -0.9 | -1.4 | -2.3 | -0.2 | 0.6 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -8.9 | -7.9 | -10.3 | -14.8 | -16.9 | -13.9 | -15.9 | -15.9 | -15.0 | 4.9 | 5.9 | 5.1 | -3.0 | -3.2 | -1.2 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 35.4547 | 50.3972 | 48.2843 | 43.0025 | 48.1709 | 44.1119 | 50.9707 | 62.3837 | 56.0425 | 50.6955 | 45.2594 | 54.9061 | 59.7897 | 67.8797 | 63.002 | 61.8325 | 64.1985 | 63.1456 |
Actin | 0.026 | 0.0001 | 0.0108 | 0.0001 | 0 | 0 | 0.0027 | 0 | 0.0019 | 0 | 0.0005 | 0.001 | 0 | 0 | 0.0011 | 0 | 0 | 0 |
Bud | 0.0012 | 0.0014 | 0.0013 | 0.0014 | 0.0021 | 0.0002 | 0.0002 | 0.0001 | 0.0003 | 0.0001 | 0.0005 | 0.0001 | 0.0001 | 0.0001 | 0.001 | 0 | 0.0004 | 0.0001 |
Bud Neck | 0.0006 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 |
Bud Periphery | 0.001 | 0.0005 | 0.0013 | 0.0004 | 0.0007 | 0.0002 | 0.0003 | 0.0001 | 0.0003 | 0.0001 | 0.0006 | 0.0002 | 0.0001 | 0.0001 | 0.0005 | 0 | 0.0009 | 0.0001 |
Bud Site | 0.0014 | 0.0014 | 0.001 | 0.0002 | 0.0002 | 0 | 0.0001 | 0 | 0.0014 | 0 | 0.0006 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0 | 0 |
Cell Periphery | 0.0022 | 0.0016 | 0.0016 | 0.0008 | 0.0015 | 0.0013 | 0.0012 | 0.0005 | 0.0009 | 0.0004 | 0.0006 | 0.0005 | 0.0011 | 0.0013 | 0.001 | 0.0009 | 0.0007 | 0.0004 |
Cytoplasm | 0.0242 | 0.0782 | 0.0753 | 0.0855 | 0.0612 | 0.0136 | 0.0108 | 0.0388 | 0.0243 | 0.0017 | 0.0042 | 0.0044 | 0.0061 | 0.0285 | 0.0342 | 0.0007 | 0.0006 | 0.0095 |
Cytoplasmic Foci | 0.0173 | 0.002 | 0.0075 | 0.0161 | 0.0001 | 0.0004 | 0.0035 | 0.0001 | 0.0087 | 0.0001 | 0.0282 | 0.0003 | 0.0008 | 0.0001 | 0.0002 | 0 | 0 | 0 |
Eisosomes | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0029 | 0.0004 | 0.0024 | 0.0031 | 0.0001 | 0.0003 | 0.0008 | 0.0004 | 0.0017 | 0.0001 | 0.0011 | 0.0006 | 0.0002 | 0.0006 | 0.0004 | 0.0001 | 0.0001 | 0.0001 |
Endosome | 0.0148 | 0.0023 | 0.0098 | 0.0148 | 0.0017 | 0.0165 | 0.0056 | 0.0025 | 0.009 | 0.0035 | 0.0053 | 0.0082 | 0.0026 | 0.0026 | 0.0036 | 0.0012 | 0.001 | 0.0023 |
Golgi | 0.0036 | 0.0001 | 0.0008 | 0.0004 | 0 | 0.0007 | 0.0006 | 0 | 0.0008 | 0 | 0.001 | 0.0004 | 0 | 0.0001 | 0.0002 | 0 | 0 | 0 |
Lipid Particles | 0.0041 | 0.0002 | 0.0019 | 0.0041 | 0 | 0.0002 | 0.0032 | 0 | 0.003 | 0 | 0.012 | 0.0003 | 0.0003 | 0.0001 | 0.0004 | 0 | 0.0001 | 0.0001 |
Mitochondria | 0.0035 | 0.0006 | 0.0018 | 0.0004 | 0.0002 | 0.0013 | 0.0013 | 0.0001 | 0.0016 | 0 | 0.0091 | 0.0004 | 0.0006 | 0.0001 | 0.0006 | 0 | 0.0001 | 0.0001 |
None | 0.0157 | 0.0029 | 0.0094 | 0.0035 | 0 | 0.0002 | 0.0013 | 0 | 0.002 | 0 | 0.005 | 0.0001 | 0.0005 | 0 | 0.0002 | 0 | 0 | 0 |
Nuclear Periphery | 0.0177 | 0.0347 | 0.0076 | 0.0062 | 0.0038 | 0.0289 | 0.0297 | 0.0342 | 0.0311 | 0.0044 | 0.0103 | 0.0404 | 0.0175 | 0.0385 | 0.0216 | 0.0067 | 0.0107 | 0.0249 |
Nucleolus | 0.0045 | 0.0022 | 0.0019 | 0.0006 | 0.0041 | 0.0031 | 0.0018 | 0.0002 | 0.0051 | 0.0001 | 0.0196 | 0.0005 | 0.0029 | 0.0006 | 0.0008 | 0.0004 | 0.0002 | 0.0026 |
Nucleus | 0.02 | 0.0183 | 0.009 | 0.0052 | 0.0168 | 0.0195 | 0.0125 | 0.004 | 0.0055 | 0.0007 | 0.0317 | 0.0068 | 0.0119 | 0.0039 | 0.0098 | 0.0009 | 0.0014 | 0.0035 |
Peroxisomes | 0.0009 | 0.0001 | 0.0006 | 0.0002 | 0 | 0 | 0.0019 | 0 | 0.0009 | 0 | 0.0014 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 | 0 |
Punctate Nuclear | 0.0059 | 0.0015 | 0.0004 | 0.0006 | 0 | 0 | 0.0013 | 0 | 0.0025 | 0 | 0.0039 | 0.0014 | 0.0001 | 0 | 0.0003 | 0 | 0 | 0 |
Vacuole | 0.4052 | 0.42 | 0.453 | 0.3827 | 0.4643 | 0.3323 | 0.3251 | 0.362 | 0.3389 | 0.3004 | 0.1677 | 0.2397 | 0.3479 | 0.3677 | 0.3732 | 0.3114 | 0.2708 | 0.24 |
Vacuole Periphery | 0.4274 | 0.4314 | 0.4021 | 0.4736 | 0.4429 | 0.5809 | 0.5956 | 0.5569 | 0.5596 | 0.6885 | 0.6964 | 0.6946 | 0.6071 | 0.5555 | 0.5504 | 0.6776 | 0.7128 | 0.7161 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 627.6767 | 573.1645 | 682.0077 | 576.3194 | 590.1045 | 618.1037 | 558.9892 | 547.944 | 603.247 | 525.6974 |
Translational Efficiency | 1.3371 | 1.5121 | 1.2127 | 1.3924 | 1.3507 | 1.2921 | 1.3352 | 1.1476 | 1.1652 | 1.3507 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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