Standard name | |
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Human Ortholog | |
Description | Subunit of RNase MRP, nuclear RNase P and telomerase; forms a soluble heterodimer with Pop6p that binds P3 domain of RNase MRP and RNase P RNAs; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Bud | 1 | 0 | 7 | 3 | 6 | 5 | – | 4 | 7 | 16 | 13 | 7 | 0 | 1 | 0 | 1 | 1 | 0 | 10 | 1 | 3 | 1 | 4 | 4 |
Bud Neck | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 2 | 0 | 1 | 0 | 1 | 1 |
Bud Site | 0 | 1 | 0 | 4 | 4 | 5 | – | 14 | 12 | 25 | 12 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 30 | 1 | 29 | 25 | 55 | 40 | – | 52 | 37 | 48 | 31 | 43 | 33 | 57 | 78 | 19 | 23 | 9 | 13 | 0 | 18 | 6 | 10 | 23 |
Endoplasmic Reticulum | 2 | 0 | 3 | 0 | 0 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 4 | 8 | 3 | 0 | 0 | 1 | 0 | 1 | 0 |
Endosome | 4 | 0 | 0 | 0 | 22 | 1 | – | 1 | 0 | 2 | 0 | 1 | 4 | 3 | 5 | 2 | 1 | 1 | 9 | 1 | 4 | 2 | 5 | 13 |
Golgi | 0 | 0 | 0 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 |
Mitochondria | 77 | 5 | 260 | 234 | 136 | 178 | – | 246 | 226 | 322 | 221 | 235 | 11 | 6 | 4 | 4 | 7 | 4 | 4 | 0 | 5 | 2 | 6 | 9 |
Nucleus | 421 | 21 | 273 | 288 | 404 | 210 | – | 237 | 201 | 294 | 186 | 190 | 189 | 263 | 258 | 29 | 33 | 24 | 426 | 51 | 264 | 90 | 164 | 122 |
Nuclear Periphery | 2 | 0 | 2 | 12 | 3 | 3 | – | 7 | 4 | 7 | 3 | 1 | 2 | 3 | 4 | 0 | 0 | 0 | 1 | 0 | 6 | 0 | 1 | 3 |
Nucleolus | 1 | 0 | 1 | 2 | 5 | 7 | – | 3 | 11 | 7 | 7 | 6 | 4 | 5 | 3 | 0 | 1 | 0 | 21 | 1 | 19 | 11 | 11 | 22 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 1 | 0 | 2 | 1 | 3 | 0 | – | 2 | 1 | 3 | 3 | 1 | 2 | 2 | 1 | 1 | 2 | 1 | 13 | 1 | 18 | 6 | 8 | 10 |
Vac/Vac Membrane | 26 | 3 | 22 | 14 | 31 | 13 | – | 8 | 12 | 13 | 14 | 16 | 9 | 24 | 24 | 11 | 10 | 9 | 46 | 10 | 75 | 26 | 84 | 118 |
Unique Cell Count | 496 | 25 | 413 | 389 | 565 | 325 | 400 | 339 | 474 | 322 | 345 | 239 | 346 | 366 | 56 | 67 | 42 | 556 | 72 | 431 | 153 | 307 | 343 | |
Labelled Cell Count | 567 | 31 | 599 | 583 | 670 | 462 | 575 | 511 | 737 | 490 | 512 | 254 | 368 | 378 | 71 | 87 | 51 | 556 | 72 | 431 | 153 | 307 | 343 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.5 | 5.3 | 3.5 | 3.6 | 4.5 | 3.7 | – | 3.9 | 3.5 | 3.6 | 3.6 | 3.7 | 5.6 | 5.4 | 5.5 | 6.4 | 5.5 | 5.8 | 5.6 | 5.4 | 5.6 |
Std Deviation (1e-4) | 0.7 | 1.8 | 0.8 | 1.4 | 1.5 | 1.6 | – | 1.7 | 2.0 | 1.4 | 2.0 | 2.0 | 2.6 | 1.3 | 1.9 | 2.0 | 2.0 | 1.6 | 2.8 | 1.6 | 2.2 |
Intensity Change (Log2) | – | – | – | 0.07 | 0.37 | 0.11 | – | 0.18 | 0.01 | 0.07 | 0.05 | 0.09 | 0.7 | 0.64 | 0.67 | 0.88 | 0.66 | 0.75 | 0.7 | 0.66 | 0.7 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -0.3 | 1.5 | 2.4 | – | 2.8 | 1.9 | 1.6 | 1.3 | 2.5 | 2.8 | 4.1 | 5.8 | 6.2 | 6.7 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | -14.6 | -17.6 | -18.2 | -7.9 | -8.0 | -6.7 |
Nucleus | 2.4 | 1.8 | -0.4 | – | -2.0 | -1.9 | -1.3 | -2.3 | -3.1 | 3.5 | 3.0 | 1.3 | -2.1 | -2.7 | -1.2 |
Nuclear Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -1.2 | 0.1 | -0.8 | – | -2.5 | -1.2 | -2.0 | -0.6 | -0.4 | -0.9 | 0.9 | 0.7 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 1.8608 | 1.7769 | 1.261 | 1.2888 | 1.2277 | 1.4841 | 1.7027 | 0.9534 | 1.0124 | 0.7733 | 0.9571 | 0.8535 | 2.9857 | 2.6799 | 2.3966 | 2.4285 | 2.7133 | 2.332 |
Actin | 0.0418 | 0.0033 | 0.0047 | 0.001 | 0.0001 | 0.0131 | 0.0118 | 0 | 0.0152 | 0.0483 | 0.0205 | 0.0124 | 0.0352 | 0.0001 | 0.011 | 0.0012 | 0.0084 | 0.006 |
Bud | 0.0012 | 0.0002 | 0.0003 | 0.0003 | 0 | 0.0002 | 0.0006 | 0.0001 | 0.001 | 0.0012 | 0.0002 | 0.0003 | 0.0006 | 0.0002 | 0.0006 | 0.0005 | 0.0001 | 0.0001 |
Bud Neck | 0.0069 | 0.0007 | 0.0005 | 0.0005 | 0.0002 | 0.0018 | 0.0065 | 0.0005 | 0.0092 | 0.0004 | 0.0008 | 0.0018 | 0.0118 | 0.0008 | 0.0021 | 0.0008 | 0.0005 | 0.0017 |
Bud Periphery | 0.0033 | 0.0003 | 0.0007 | 0.0007 | 0.0001 | 0.0006 | 0.0024 | 0.0001 | 0.0014 | 0.0013 | 0.0004 | 0.0015 | 0.0016 | 0.0003 | 0.0009 | 0.0006 | 0.0003 | 0.0001 |
Bud Site | 0.0265 | 0.0012 | 0.0011 | 0.0011 | 0.0001 | 0.0005 | 0.0057 | 0.0004 | 0.0138 | 0.0102 | 0.0003 | 0.0006 | 0.002 | 0.0029 | 0.0032 | 0.0024 | 0.0002 | 0.0001 |
Cell Periphery | 0.0102 | 0.0002 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0042 | 0.0001 | 0.0007 | 0.0001 | 0.0001 | 0.0006 | 0.0003 | 0.0001 | 0.0003 | 0.0001 | 0 | 0.0001 |
Cytoplasm | 0.0034 | 0.0021 | 0.0057 | 0.0005 | 0.0003 | 0.0116 | 0.0095 | 0.0025 | 0.0067 | 0.0602 | 0.0004 | 0.0009 | 0.0073 | 0.001 | 0.0032 | 0.0024 | 0.0024 | 0.0006 |
Cytoplasmic Foci | 0.0189 | 0.0012 | 0.0065 | 0.0088 | 0 | 0.0023 | 0.029 | 0.0001 | 0.0048 | 0.0037 | 0.0218 | 0.0006 | 0.004 | 0.0002 | 0.0007 | 0.0031 | 0.0037 | 0.0003 |
Eisosomes | 0.0007 | 0.0001 | 0 | 0 | 0 | 0 | 0.0004 | 0 | 0.0028 | 0.0001 | 0.0003 | 0.0005 | 0.0007 | 0 | 0.0001 | 0 | 0.0001 | 0.0001 |
Endoplasmic Reticulum | 0.0031 | 0.0017 | 0.0015 | 0.0002 | 0 | 0.0003 | 0.011 | 0.0006 | 0.0023 | 0.0007 | 0.0007 | 0.0064 | 0.0039 | 0.0001 | 0.0023 | 0.0011 | 0.0006 | 0.0004 |
Endosome | 0.0356 | 0.005 | 0.01 | 0.0097 | 0.0001 | 0.0048 | 0.0438 | 0.0005 | 0.0075 | 0.0026 | 0.0064 | 0.007 | 0.0169 | 0.0003 | 0.004 | 0.0203 | 0.0123 | 0.001 |
Golgi | 0.0121 | 0.0026 | 0.0027 | 0.0048 | 0 | 0.0062 | 0.0097 | 0 | 0.0043 | 0.002 | 0.0117 | 0.0027 | 0.0048 | 0.0001 | 0.0016 | 0.0019 | 0.0049 | 0.0005 |
Lipid Particles | 0.0382 | 0.0013 | 0.0058 | 0.047 | 0 | 0.0024 | 0.0212 | 0.0001 | 0.0092 | 0.0009 | 0.0074 | 0.0014 | 0.0066 | 0.0001 | 0.0065 | 0.0021 | 0.0261 | 0.0003 |
Mitochondria | 0.0579 | 0.0038 | 0.0027 | 0.0029 | 0.0009 | 0.0089 | 0.012 | 0.0003 | 0.0059 | 0.0012 | 0.0329 | 0.0152 | 0.0175 | 0.0003 | 0.0018 | 0.002 | 0.0014 | 0.0004 |
None | 0.0034 | 0.0011 | 0.0048 | 0.0003 | 0.0001 | 0.0005 | 0.0153 | 0.0019 | 0.0194 | 0.0063 | 0.0004 | 0.0003 | 0.0136 | 0.0052 | 0.001 | 0.0043 | 0.0029 | 0.0089 |
Nuclear Periphery | 0.0198 | 0.0202 | 0.0096 | 0.0023 | 0.0067 | 0.0124 | 0.0616 | 0.0158 | 0.0063 | 0.0067 | 0.0014 | 0.0069 | 0.0347 | 0.0047 | 0.0157 | 0.0092 | 0.0168 | 0.0109 |
Nucleolus | 0.0535 | 0.0897 | 0.0544 | 0.0148 | 0.0293 | 0.0684 | 0.037 | 0.0669 | 0.0885 | 0.0175 | 0.0438 | 0.0739 | 0.0445 | 0.0576 | 0.0822 | 0.0946 | 0.0436 | 0.0796 |
Nucleus | 0.5974 | 0.8564 | 0.8726 | 0.8785 | 0.9568 | 0.8593 | 0.6663 | 0.8972 | 0.7803 | 0.8318 | 0.8202 | 0.8449 | 0.7633 | 0.9226 | 0.8557 | 0.8397 | 0.8363 | 0.8828 |
Peroxisomes | 0.0128 | 0.0002 | 0.0042 | 0.0209 | 0 | 0.0026 | 0.0049 | 0 | 0.0054 | 0.0032 | 0.0276 | 0.0001 | 0.004 | 0.0001 | 0.0004 | 0.0011 | 0.0083 | 0.0001 |
Punctate Nuclear | 0.0275 | 0.0062 | 0.0064 | 0.0043 | 0.0048 | 0.0018 | 0.0265 | 0.0109 | 0.0047 | 0.0011 | 0.0019 | 0.0159 | 0.0203 | 0.0028 | 0.004 | 0.0078 | 0.0303 | 0.0053 |
Vacuole | 0.0168 | 0.0013 | 0.0044 | 0.001 | 0.0002 | 0.0013 | 0.0137 | 0.0014 | 0.0088 | 0.0004 | 0.0003 | 0.0044 | 0.0038 | 0.0006 | 0.0018 | 0.0038 | 0.0003 | 0.0004 |
Vacuole Periphery | 0.0087 | 0.0012 | 0.0015 | 0.0004 | 0.0003 | 0.0007 | 0.0069 | 0.0006 | 0.0018 | 0.0003 | 0.0005 | 0.0016 | 0.0024 | 0.0001 | 0.001 | 0.0009 | 0.0005 | 0.0002 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 9.1298 | 9.3274 | 12.1124 | 14.4127 | 5.0731 | 7.8212 | 10.0204 | 14.3218 | 14.1211 | 15.6711 |
Translational Efficiency | 3.6007 | 2.5378 | 1.821 | 1.3655 | 3.6241 | 3.6719 | 2.8239 | 1.3933 | 1.5109 | 1.6627 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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