Standard name | |
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Human Ortholog | |
Description | Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9B has a paralog, RPS9A, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 1 | 8 | 15 | 11 | 17 | 4 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 1 | 0 | 1 | 4 | 3 | 2 | 0 | 0 | 1 | 1 | 3 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 6 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 3 | 4 | 6 | 8 | 18 | 15 | 10 | 21 | 7 | 8 | 5 | 25 | 17 | 4 | 1 | 4 | 0 | 0 | 0 | 0 | 1 | 1 |
Cytoplasm | 217 | 97 | 143 | 186 | 333 | 212 | 336 | 295 | 184 | 253 | 153 | 187 | 468 | 852 | 795 | 118 | 46 | 96 | 203 | 94 | 137 | 328 | 605 | 652 |
Endoplasmic Reticulum | 3 | 3 | 1 | 5 | 19 | 29 | 58 | 72 | 45 | 66 | 27 | 40 | 8 | 15 | 12 | 10 | 4 | 4 | 2 | 1 | 3 | 7 | 13 | 16 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 1 | 1 | 0 | 6 | 6 | 12 | 14 | 11 | 0 | 5 | 1 | 1 | 2 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 5 | 3 | 5 | 1 | 5 | 2 | 3 | 4 | 1 | 1 | 0 | 0 | 2 | 0 | 4 | 9 | 3 |
Unique Cell Count | 219 | 100 | 144 | 192 | 349 | 244 | 406 | 391 | 248 | 349 | 187 | 238 | 478 | 869 | 816 | 121 | 48 | 100 | 211 | 102 | 148 | 350 | 653 | 690 |
Labelled Cell Count | 220 | 101 | 148 | 197 | 358 | 259 | 432 | 419 | 270 | 374 | 194 | 251 | 485 | 899 | 832 | 135 | 53 | 104 | 211 | 102 | 148 | 350 | 653 | 690 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 78.8 | 114.1 | 88.6 | 88.9 | 68.2 | 51.0 | 44.3 | 38.2 | 39.3 | 36.2 | 35.5 | 37.0 | 96.1 | 98.7 | 90.9 | 322.8 | 338.8 | 324.4 | 98.6 | 97.2 | 105.9 |
Std Deviation (1e-4) | 23.8 | 30.6 | 23.9 | 33.8 | 14.7 | 11.4 | 11.5 | 9.3 | 12.9 | 10.0 | 8.5 | 9.7 | 20.3 | 21.5 | 20.7 | 124.2 | 141.2 | 117.0 | 22.7 | 24.0 | 25.3 |
Intensity Change (Log2) | – | – | – | 0.0 | -0.38 | -0.8 | -1.0 | -1.21 | -1.17 | -1.29 | -1.32 | -1.26 | 0.12 | 0.16 | 0.04 | 1.87 | 1.94 | 1.87 | 0.16 | 0.13 | 0.26 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 1.3 | 0 | 0 | 1.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -1.5 | -2.2 | -4.2 | -5.1 | -6.4 | -6.4 | -6.8 | -5.1 | -5.7 | -1.1 | -1.1 | -1.4 | -1.2 | -1.7 | -1.8 |
Endoplasmic Reticulum | 0 | 2.4 | 4.0 | 4.5 | 5.3 | 5.2 | 5.4 | 4.5 | 4.9 | 0 | 0 | 0 | 3.1 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 2.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 104.3309 | 136.7416 | 119.4752 | 115.4744 | 87.4253 | 119.2494 | 106.1941 | 153.5483 | 132.4056 | 106.2758 | 126.2308 | 143.0174 | 126.0564 | 159.144 | 140.0432 | 121.6026 | 122.0663 | 118.3657 |
Actin | 0.0008 | 0.0003 | 0.0005 | 0.0003 | 0.0014 | 0.0003 | 0.0086 | 0 | 0.0014 | 0.0006 | 0.0009 | 0.0001 | 0.0014 | 0.0001 | 0.0047 | 0.0004 | 0.0005 | 0.0012 |
Bud | 0.0018 | 0.0014 | 0.0013 | 0.0044 | 0.0024 | 0.0003 | 0.0049 | 0.0003 | 0.0009 | 0.0012 | 0.0009 | 0.0001 | 0.0034 | 0.0001 | 0.0009 | 0.0013 | 0.0013 | 0.0021 |
Bud Neck | 0.0019 | 0.0004 | 0.0013 | 0.0004 | 0.0008 | 0.0013 | 0.0008 | 0.0002 | 0.0002 | 0.0004 | 0.0005 | 0.0015 | 0.0004 | 0.0001 | 0.0013 | 0.0004 | 0.0006 | 0.0064 |
Bud Periphery | 0.0017 | 0.0006 | 0.0011 | 0.0089 | 0.0021 | 0.0002 | 0.0044 | 0 | 0.0004 | 0.0015 | 0.0003 | 0 | 0.0066 | 0 | 0.0011 | 0.0009 | 0.0012 | 0.0011 |
Bud Site | 0.0036 | 0.0009 | 0.0024 | 0.0002 | 0.0004 | 0.0001 | 0.0118 | 0.0001 | 0.0003 | 0.0003 | 0.0003 | 0 | 0.0052 | 0.0001 | 0.0006 | 0.0002 | 0.0003 | 0.0007 |
Cell Periphery | 0.0157 | 0.0101 | 0.0077 | 0.0021 | 0.0025 | 0.0014 | 0.0082 | 0.001 | 0.0021 | 0.0106 | 0.0007 | 0.0066 | 0.0091 | 0.002 | 0.0019 | 0.0096 | 0.0292 | 0.0034 |
Cytoplasm | 0.7763 | 0.9463 | 0.8565 | 0.8978 | 0.7119 | 0.7893 | 0.7427 | 0.971 | 0.8963 | 0.7255 | 0.8451 | 0.9312 | 0.788 | 0.9784 | 0.8787 | 0.7784 | 0.768 | 0.7376 |
Cytoplasmic Foci | 0.011 | 0.0014 | 0.015 | 0.0012 | 0.029 | 0.002 | 0.0187 | 0.0006 | 0.0111 | 0.0199 | 0.0044 | 0.0052 | 0.0046 | 0.0005 | 0.0124 | 0.0114 | 0.0041 | 0.0705 |
Eisosomes | 0.0001 | 0 | 0.0002 | 0 | 0.0002 | 0 | 0.0007 | 0 | 0.0001 | 0.0006 | 0 | 0 | 0.0002 | 0 | 0.0002 | 0.0006 | 0.0003 | 0.0003 |
Endoplasmic Reticulum | 0.0335 | 0.008 | 0.0248 | 0.0022 | 0.0031 | 0.1628 | 0.0125 | 0.0121 | 0.0034 | 0.0038 | 0.0064 | 0.0032 | 0.0264 | 0.0015 | 0.0049 | 0.0155 | 0.0049 | 0.0113 |
Endosome | 0.0102 | 0.0011 | 0.0026 | 0.0025 | 0.0051 | 0.0046 | 0.0175 | 0.0005 | 0.0028 | 0.0285 | 0.0484 | 0.0041 | 0.0059 | 0.0006 | 0.0132 | 0.003 | 0.0316 | 0.0144 |
Golgi | 0.0016 | 0.0002 | 0.0005 | 0.0001 | 0.0004 | 0.0011 | 0.0065 | 0.0001 | 0.0012 | 0.004 | 0.0061 | 0.0003 | 0.001 | 0.0001 | 0.0076 | 0.0008 | 0.0181 | 0.0009 |
Lipid Particles | 0.0019 | 0.0009 | 0.0025 | 0.0001 | 0.0028 | 0.0002 | 0.0051 | 0.0001 | 0.0017 | 0.0188 | 0.0008 | 0.0085 | 0.0014 | 0.0001 | 0.006 | 0.0022 | 0.0074 | 0.0043 |
Mitochondria | 0.0038 | 0.0009 | 0.0076 | 0.0047 | 0.0067 | 0.0003 | 0.0278 | 0 | 0.0106 | 0.0277 | 0.0062 | 0.0001 | 0.0044 | 0 | 0.007 | 0.0167 | 0.0114 | 0.0206 |
None | 0.0044 | 0.0006 | 0.0027 | 0.0005 | 0.0208 | 0.0004 | 0.0131 | 0.0001 | 0.0046 | 0.0076 | 0.0029 | 0.0006 | 0.0021 | 0.0001 | 0.0051 | 0.0109 | 0.0016 | 0.0323 |
Nuclear Periphery | 0.0138 | 0.0012 | 0.004 | 0.0025 | 0.0421 | 0.0069 | 0.0157 | 0.0012 | 0.0026 | 0.0051 | 0.0142 | 0.0048 | 0.0272 | 0.0009 | 0.0096 | 0.009 | 0.0022 | 0.0068 |
Nucleolus | 0.0086 | 0.0014 | 0.0056 | 0.0002 | 0.0276 | 0.0002 | 0.0103 | 0 | 0.0095 | 0.018 | 0.002 | 0.0015 | 0.0014 | 0.0001 | 0.0024 | 0.0066 | 0.0024 | 0.021 |
Nucleus | 0.0092 | 0.0016 | 0.004 | 0.002 | 0.0514 | 0.0021 | 0.0081 | 0.0009 | 0.0041 | 0.0046 | 0.0098 | 0.0043 | 0.0209 | 0.0007 | 0.0024 | 0.0055 | 0.0045 | 0.0088 |
Peroxisomes | 0.0004 | 0.0001 | 0.0007 | 0.0001 | 0.0005 | 0 | 0.0154 | 0 | 0.0055 | 0.002 | 0.0002 | 0 | 0.0079 | 0 | 0.0014 | 0.0003 | 0.0014 | 0.0014 |
Punctate Nuclear | 0.0014 | 0 | 0.0002 | 0 | 0.0019 | 0.0001 | 0.0008 | 0 | 0.0002 | 0.0004 | 0.0008 | 0.0004 | 0.0006 | 0 | 0.0008 | 0.0003 | 0.0001 | 0.0033 |
Vacuole | 0.0802 | 0.0205 | 0.0503 | 0.0597 | 0.0698 | 0.0227 | 0.052 | 0.011 | 0.0302 | 0.0917 | 0.0369 | 0.0243 | 0.0618 | 0.0127 | 0.0276 | 0.1016 | 0.0884 | 0.0379 |
Vacuole Periphery | 0.018 | 0.0021 | 0.0084 | 0.0102 | 0.0169 | 0.0037 | 0.0143 | 0.0007 | 0.0108 | 0.0272 | 0.0121 | 0.0032 | 0.0202 | 0.0016 | 0.0102 | 0.0244 | 0.0206 | 0.0138 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 2547.4006 | 2997.7113 | 3460.5028 | 2428.4603 | 3147.1033 | 2755.1085 | 2232.954 | 2039.4128 | 2425.5046 | 2026.0505 |
Translational Efficiency | 1.4694 | 1.3649 | 1.3135 | 2.1157 | 1.5855 | 1.2152 | 1.4787 | 1.9085 | 1.43 | 1.7152 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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