Standard name | |
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Human Ortholog | |
Description | Transcriptional regulator; involved in regulation of gluconeogenesis and fermentable carbon utilization; GFP-fusion protein localizes to cytoplasm, nucleus; null mutation affects periodicity of transcriptional and metabolic oscillation; plays role in restricting Ty1 transposition; member of the zinc cluster family of proteins, similar to Rds2p |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 |
Bud | 0 | 0 | 0 | 1 | 2 | 10 | 10 | 10 | 17 | 15 | 6 | 3 | 0 | 0 | 0 | – | 0 | 0 | 0 | 3 | 2 | 3 | 4 | 5 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 3 |
Bud Site | 0 | 0 | 0 | 0 | 1 | 6 | 7 | 9 | 11 | 24 | 3 | 13 | 0 | 0 | 0 | – | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1 | 16 | 14 | 15 | 43 | 70 | 83 | 70 | 44 | 46 | 18 | 28 | 19 | 64 | 67 | – | 89 | 66 | 0 | 10 | 8 | 7 | 8 | 14 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | – | 21 | 20 | 0 | 0 | 0 | 0 | 1 | 1 |
Endosome | 0 | 9 | 3 | 3 | 55 | 0 | 3 | 21 | 0 | 3 | 0 | 0 | 0 | 5 | 7 | – | 53 | 22 | 1 | 5 | 3 | 0 | 9 | 4 |
Golgi | 0 | 0 | 0 | 0 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | – | 2 | 4 | 0 | 0 | 1 | 0 | 2 | 3 |
Mitochondria | 14 | 40 | 59 | 87 | 118 | 295 | 365 | 359 | 388 | 459 | 169 | 245 | 11 | 16 | 15 | – | 20 | 32 | 1 | 2 | 7 | 2 | 9 | 10 |
Nucleus | 14 | 143 | 147 | 97 | 133 | 123 | 123 | 163 | 142 | 206 | 72 | 98 | 76 | 106 | 71 | – | 119 | 123 | 41 | 202 | 153 | 36 | 59 | 40 |
Nuclear Periphery | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 4 | 2 | 4 | 2 | 3 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
Nucleolus | 0 | 2 | 2 | 1 | 3 | 2 | 7 | 11 | 6 | 8 | 3 | 5 | 0 | 1 | 0 | – | 1 | 3 | 0 | 2 | 8 | 0 | 11 | 2 |
Peroxisomes | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 1 | 8 | 3 | 9 | 13 | 3 | 9 | 1 | 1 | 0 | 0 | 0 | – | 9 | 3 | 0 | 9 | 6 | 4 | 13 | 6 |
Vac/Vac Membrane | 0 | 88 | 23 | 11 | 70 | 34 | 48 | 36 | 25 | 27 | 13 | 19 | 15 | 48 | 61 | – | 78 | 79 | 7 | 61 | 61 | 21 | 49 | 57 |
Unique Cell Count | 18 | 257 | 208 | 176 | 355 | 422 | 494 | 549 | 461 | 562 | 213 | 290 | 111 | 226 | 198 | 332 | 295 | 57 | 304 | 261 | 84 | 182 | 157 | |
Labelled Cell Count | 29 | 300 | 248 | 216 | 437 | 545 | 657 | 701 | 639 | 802 | 288 | 415 | 122 | 241 | 221 | 393 | 352 | 57 | 304 | 261 | 84 | 182 | 157 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.5 | 4.3 | 4.5 | 4.1 | 4.2 | 3.6 | 3.2 | 3.7 | 3.3 | 3.1 | 3.4 | 3.1 | 4.5 | 4.4 | 4.3 | 4.8 | 5.6 | 5.8 | 4.2 | 4.3 | 5.7 |
Std Deviation (1e-4) | 0.6 | 0.7 | 1.4 | 1.5 | 1.7 | 1.4 | 1.5 | 1.8 | 1.3 | 1.4 | 1.4 | 1.3 | 1.4 | 1.1 | 1.0 | 1.3 | 1.6 | 1.5 | 1.0 | 1.3 | 2.5 |
Intensity Change (Log2) | – | – | – | -0.11 | -0.07 | -0.31 | -0.48 | -0.27 | -0.45 | -0.54 | -0.39 | -0.52 | 0.02 | -0.02 | -0.04 | 0.09 | 0.34 | 0.38 | -0.08 | -0.04 | 0.36 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | 3.6 | 4.3 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -1.2821 | -0.5321 | -0.5551 | -0.4681 | -1.0014 | -0.59 | 0.3872 | 1.4411 | 1.1393 | 1.1903 | -0.0562 | 1.041 | 1.4705 | 1.3649 | 1.696 | 1.1846 | 0.9145 | 1.3408 |
Actin | 0.0001 | 0.0002 | 0.0008 | 0.0003 | 0.0008 | 0.0004 | 0.039 | 0.0002 | 0.0145 | 0.0017 | 0.0082 | 0.0063 | 0.031 | 0.0002 | 0.035 | 0.0004 | 0.0002 | 0.0013 |
Bud | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0008 | 0.0002 | 0.0004 | 0.0002 | 0.0001 | 0.0001 |
Bud Neck | 0.0005 | 0.0004 | 0.0004 | 0.0005 | 0.0006 | 0.0037 | 0.0007 | 0.0002 | 0.0007 | 0.0007 | 0.0007 | 0.003 | 0.0023 | 0.0004 | 0.0009 | 0.0014 | 0.0007 | 0.0023 |
Bud Periphery | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0.0006 | 0 | 0.0002 | 0.0004 | 0.0003 | 0.0001 | 0.0011 | 0.0002 | 0.0004 | 0.0002 | 0.0001 | 0.0002 |
Bud Site | 0.0003 | 0.0014 | 0.0005 | 0.0002 | 0.0001 | 0.0002 | 0.0021 | 0.0007 | 0.0014 | 0.0008 | 0.0005 | 0.0002 | 0.0084 | 0.001 | 0.0062 | 0.001 | 0.0004 | 0.0002 |
Cell Periphery | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0012 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 |
Cytoplasm | 0.0236 | 0.1325 | 0.0714 | 0.0772 | 0.0348 | 0.0353 | 0.0639 | 0.0923 | 0.0555 | 0.0568 | 0.0373 | 0.0619 | 0.0826 | 0.0889 | 0.0875 | 0.0488 | 0.042 | 0.0385 |
Cytoplasmic Foci | 0.0003 | 0.0029 | 0.004 | 0.003 | 0.0056 | 0.0075 | 0.0191 | 0.0022 | 0.0283 | 0.0208 | 0.014 | 0.0042 | 0.0324 | 0.0019 | 0.015 | 0.008 | 0.0016 | 0.0011 |
Eisosomes | 0 | 0 | 0.0004 | 0 | 0 | 0 | 0.0003 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0022 | 0.0001 | 0.0003 | 0 | 0.0002 | 0 |
Endoplasmic Reticulum | 0.0011 | 0.0078 | 0.0015 | 0.0029 | 0.001 | 0.0016 | 0.0033 | 0.0042 | 0.0048 | 0.0034 | 0.0012 | 0.0037 | 0.003 | 0.0056 | 0.0031 | 0.0016 | 0.0012 | 0.0013 |
Endosome | 0.0006 | 0.0085 | 0.0053 | 0.0037 | 0.0011 | 0.0042 | 0.0241 | 0.0054 | 0.0253 | 0.0153 | 0.0122 | 0.007 | 0.0407 | 0.0043 | 0.0122 | 0.0451 | 0.0009 | 0.0023 |
Golgi | 0 | 0.0001 | 0.0009 | 0.0001 | 0.0001 | 0.0001 | 0.0076 | 0.0001 | 0.0137 | 0.0053 | 0.0097 | 0.0032 | 0.0202 | 0.0001 | 0.0037 | 0.0023 | 0.0001 | 0.0002 |
Lipid Particles | 0.0001 | 0.0013 | 0.0096 | 0.0005 | 0.0007 | 0.0009 | 0.0228 | 0.0004 | 0.0118 | 0.0034 | 0.0126 | 0.0017 | 0.0061 | 0.001 | 0.0123 | 0.0018 | 0.0004 | 0.0016 |
Mitochondria | 0.0004 | 0.0005 | 0.0007 | 0.0008 | 0.0009 | 0.0006 | 0.0053 | 0.0006 | 0.0048 | 0.0136 | 0.0029 | 0.0012 | 0.0252 | 0.0009 | 0.0015 | 0.0009 | 0.0012 | 0.0014 |
None | 0.0605 | 0.1515 | 0.2167 | 0.1126 | 0.0608 | 0.057 | 0.1144 | 0.4948 | 0.2028 | 0.3463 | 0.2459 | 0.159 | 0.1712 | 0.1564 | 0.1352 | 0.0502 | 0.3099 | 0.0726 |
Nuclear Periphery | 0.0139 | 0.0338 | 0.0108 | 0.0325 | 0.0173 | 0.0228 | 0.0142 | 0.02 | 0.0354 | 0.0208 | 0.0101 | 0.0165 | 0.0088 | 0.027 | 0.0283 | 0.0077 | 0.0074 | 0.0172 |
Nucleolus | 0.0069 | 0.0069 | 0.0067 | 0.0045 | 0.0059 | 0.0107 | 0.0074 | 0.0038 | 0.0063 | 0.0057 | 0.0057 | 0.0101 | 0.0176 | 0.009 | 0.0071 | 0.0046 | 0.0094 | 0.0103 |
Nucleus | 0.8849 | 0.6302 | 0.6312 | 0.6868 | 0.8564 | 0.7912 | 0.6239 | 0.3408 | 0.5318 | 0.4506 | 0.5428 | 0.6629 | 0.4878 | 0.6852 | 0.5703 | 0.7577 | 0.6104 | 0.8242 |
Peroxisomes | 0 | 0.0001 | 0.0011 | 0.0001 | 0.0004 | 0.0002 | 0.0193 | 0.0001 | 0.0093 | 0.0188 | 0.0166 | 0.0011 | 0.0027 | 0.0001 | 0.0083 | 0.0003 | 0.0001 | 0.0008 |
Punctate Nuclear | 0.0052 | 0.0161 | 0.0359 | 0.0718 | 0.0118 | 0.0614 | 0.0242 | 0.0312 | 0.0498 | 0.0307 | 0.078 | 0.0559 | 0.0505 | 0.0128 | 0.0705 | 0.0629 | 0.0125 | 0.0229 |
Vacuole | 0.0012 | 0.0048 | 0.0016 | 0.0019 | 0.0012 | 0.0014 | 0.0063 | 0.0021 | 0.0019 | 0.0032 | 0.0006 | 0.0015 | 0.0036 | 0.0035 | 0.0012 | 0.0042 | 0.001 | 0.001 |
Vacuole Periphery | 0.0003 | 0.0007 | 0.0004 | 0.0004 | 0.0004 | 0.0005 | 0.0009 | 0.0007 | 0.001 | 0.0013 | 0.0004 | 0.0003 | 0.0008 | 0.0011 | 0.0005 | 0.0007 | 0.0002 | 0.0004 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 9.7155 | 11.1665 | 8.286 | 7.6686 | 8.5477 | 14.5652 | 8.4678 | 9.102 | 8.5079 | 8.7071 |
Translational Efficiency | 0.4003 | 0.2472 | 0.38 | 0.3481 | 0.4822 | 0.3477 | 0.4892 | 0.4774 | 0.4196 | 0.5506 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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