Standard name | |
---|---|
Human Ortholog | |
Description | 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase; catalyzes the first step in aromatic amino acid biosynthesis and is feedback-inhibited by tyrosine or high concentrations of phenylalanine or tryptophan; relative distribution to the nucleus increases upon DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 3 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 2 | 0 | 1 | 6 | 6 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 |
Cytoplasm | 109 | 17 | 88 | 125 | 128 | 139 | 142 | 86 | 66 | 56 | 27 | 37 | 25 | 69 | 135 | 229 | 162 | 202 | 51 | 46 | 108 | 65 | 160 | 180 |
Endoplasmic Reticulum | 0 | 0 | 1 | 0 | 6 | 8 | 11 | 10 | 15 | 5 | 6 | 3 | 0 | 2 | 3 | 8 | 10 | 9 | 4 | 4 | 5 | 1 | 4 | 5 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 6 | 4 | 4 | 0 | 3 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 2 | 2 | 0 | 4 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 1 | 0 | 1 | 2 | 1 | 1 | 13 | 13 | 32 | 26 | 11 | 14 | 118 | 23 | 0 | 0 | 0 | 0 | 22 | 29 | 21 | 41 | 42 | 27 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 |
Nucleolus | 2 | 0 | 0 | 1 | 0 | 1 | 1 | 5 | 12 | 9 | 8 | 6 | 8 | 10 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 1 | 2 | 5 | 6 | 16 | 28 | 49 | 42 | 39 | 39 | 2 | 8 | 2 | 0 | 0 | 0 | 2 | 7 | 5 | 10 | 15 | 15 |
Unique Cell Count | 111 | 17 | 91 | 129 | 139 | 156 | 179 | 147 | 178 | 142 | 91 | 99 | 146 | 113 | 140 | 231 | 165 | 204 | 95 | 95 | 152 | 128 | 247 | 250 |
Labelled Cell Count | 112 | 17 | 92 | 130 | 140 | 160 | 185 | 152 | 184 | 151 | 95 | 105 | 157 | 114 | 142 | 239 | 173 | 213 | 95 | 95 | 152 | 128 | 247 | 250 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 152.3 | 198.7 | 136.6 | 130.0 | 104.8 | 78.9 | 58.9 | 54.3 | 47.3 | 44.3 | 38.3 | 41.7 | 152.8 | 146.1 | 146.9 | 211.8 | 227.9 | 219.0 | 137.8 | 145.8 | 150.7 |
Std Deviation (1e-4) | 39.8 | 57.6 | 30.3 | 32.0 | 26.8 | 19.0 | 14.8 | 14.8 | 10.6 | 11.8 | 12.5 | 13.2 | 48.8 | 46.5 | 45.2 | 58.8 | 71.7 | 68.3 | 43.4 | 40.5 | 42.6 |
Intensity Change (Log2) | – | – | – | -0.07 | -0.38 | -0.79 | -1.21 | -1.33 | -1.53 | -1.62 | -1.83 | -1.71 | 0.16 | 0.1 | 0.1 | 0.63 | 0.74 | 0.68 | 0.01 | 0.09 | 0.14 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.1 | -1.4 | -2.1 | -3.8 | -6.5 | -9.4 | -8.8 | -9.4 | -8.6 | -11.9 | -6.0 | -0.1 | 1.6 | 0.7 | 1.4 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 2.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 2.5 | 4.0 | 4.0 | 3.0 | 3.3 | 11.9 | 4.2 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 2.5 | 4.1 | 5.3 | 5.5 | 6.8 | 6.5 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 60.873 | 209.0777 | 205.8403 | 166.4663 | 115.1939 | 103.7642 | 135.3797 | 174.5884 | 167.2258 | 149.1026 | 121.9713 | 150.5156 | 127.3028 | 173.0921 | 157.8855 | 140.165 | 109.1312 | 148.7444 |
Actin | 0.0211 | 0.0026 | 0.009 | 0.0044 | 0.0244 | 0.048 | 0.0003 | 0.0002 | 0.0002 | 0.0002 | 0.001 | 0.0001 | 0.0101 | 0.0002 | 0.0001 | 0.0532 | 0.0049 | 0.0002 |
Bud | 0.0124 | 0.0009 | 0.0001 | 0.004 | 0.0008 | 0.0055 | 0.0007 | 0.0005 | 0.0002 | 0.0002 | 0.0028 | 0.0001 | 0.0017 | 0.0008 | 0.0002 | 0.001 | 0.005 | 0.0003 |
Bud Neck | 0.0012 | 0.0003 | 0.0008 | 0.0004 | 0.0004 | 0.0018 | 0 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0.0004 | 0.0002 | 0.0001 | 0.0001 | 0.0011 | 0.0004 | 0.0005 |
Bud Periphery | 0.006 | 0.0003 | 0 | 0.006 | 0.0005 | 0.005 | 0.0001 | 0.0001 | 0 | 0 | 0.0009 | 0 | 0.0007 | 0.0002 | 0.0001 | 0.0006 | 0.0017 | 0.0001 |
Bud Site | 0.0082 | 0.0006 | 0.0001 | 0.0037 | 0.0003 | 0.0093 | 0 | 0.0001 | 0 | 0 | 0.001 | 0 | 0.0008 | 0.0002 | 0.0001 | 0.0044 | 0.0009 | 0 |
Cell Periphery | 0.0068 | 0.0001 | 0 | 0.0004 | 0.0006 | 0.0009 | 0 | 0.0001 | 0 | 0 | 0.0019 | 0 | 0.0008 | 0.0006 | 0.0001 | 0.0001 | 0.001 | 0.0001 |
Cytoplasm | 0.2752 | 0.794 | 0.6386 | 0.5533 | 0.4622 | 0.4255 | 0.222 | 0.6145 | 0.5401 | 0.6438 | 0.3945 | 0.2951 | 0.3451 | 0.6196 | 0.4687 | 0.447 | 0.3872 | 0.6784 |
Cytoplasmic Foci | 0.1261 | 0.001 | 0.002 | 0.0021 | 0.0453 | 0.0402 | 0 | 0.0001 | 0.0003 | 0.0009 | 0.0567 | 0 | 0.0314 | 0.0034 | 0.0108 | 0.0195 | 0.0109 | 0.0003 |
Eisosomes | 0.0012 | 0 | 0 | 0.0001 | 0.001 | 0.0002 | 0 | 0 | 0 | 0 | 0.0003 | 0 | 0.0002 | 0 | 0 | 0.0001 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0045 | 0.0001 | 0.0001 | 0.0035 | 0.0041 | 0.0141 | 0.0001 | 0.0001 | 0.0001 | 0.0006 | 0.0013 | 0.0002 | 0.0009 | 0.0001 | 0.0001 | 0.0003 | 0.0011 | 0.0006 |
Endosome | 0.0507 | 0.0001 | 0.0008 | 0.0076 | 0.0161 | 0.1228 | 0 | 0 | 0.0001 | 0.0022 | 0.0015 | 0 | 0.0035 | 0.0012 | 0.0001 | 0.0031 | 0.0571 | 0.0003 |
Golgi | 0.0233 | 0.0003 | 0.0026 | 0.0024 | 0.0184 | 0.0356 | 0 | 0 | 0 | 0.0001 | 0.0003 | 0 | 0.0015 | 0.0012 | 0 | 0.0094 | 0.0453 | 0 |
Lipid Particles | 0.0319 | 0.0002 | 0.0003 | 0.0003 | 0.0106 | 0.0104 | 0 | 0 | 0 | 0 | 0.0067 | 0 | 0.0079 | 0.0002 | 0.0011 | 0.0005 | 0.0048 | 0 |
Mitochondria | 0.0268 | 0.0011 | 0.0005 | 0.0548 | 0.0553 | 0.0205 | 0.0045 | 0.0006 | 0.0005 | 0.0006 | 0.0099 | 0.0002 | 0.0092 | 0.0006 | 0.0024 | 0.0014 | 0.0967 | 0.0003 |
None | 0.0326 | 0.0012 | 0.0003 | 0.0019 | 0.0405 | 0.0176 | 0.0002 | 0.0002 | 0.0004 | 0.0002 | 0.0391 | 0 | 0.0118 | 0.0012 | 0.0036 | 0.0002 | 0.0093 | 0.0003 |
Nuclear Periphery | 0.0166 | 0.0104 | 0.0212 | 0.0161 | 0.0358 | 0.0445 | 0.0219 | 0.0155 | 0.0186 | 0.0137 | 0.0445 | 0.0403 | 0.0491 | 0.0214 | 0.0326 | 0.032 | 0.0347 | 0.0427 |
Nucleolus | 0.1003 | 0.0034 | 0.0006 | 0.0004 | 0.0192 | 0.0117 | 0.0005 | 0.0007 | 0.0024 | 0.0001 | 0.0385 | 0.0001 | 0.0233 | 0.0016 | 0.0069 | 0.0002 | 0.0021 | 0.0015 |
Nucleus | 0.1836 | 0.1806 | 0.3187 | 0.3331 | 0.2522 | 0.1619 | 0.7483 | 0.3659 | 0.4341 | 0.3353 | 0.3713 | 0.6625 | 0.4851 | 0.3445 | 0.4684 | 0.417 | 0.3245 | 0.2687 |
Peroxisomes | 0.0161 | 0.0004 | 0.0012 | 0.0006 | 0.0023 | 0.0039 | 0 | 0 | 0 | 0 | 0.0008 | 0 | 0.001 | 0.0003 | 0.0002 | 0.008 | 0.0022 | 0 |
Punctate Nuclear | 0.0254 | 0.0005 | 0.0028 | 0.0005 | 0.0017 | 0.0074 | 0.0002 | 0.0003 | 0.0014 | 0.0002 | 0.0056 | 0.0003 | 0.007 | 0.001 | 0.0016 | 0.0007 | 0.0006 | 0.0006 |
Vacuole | 0.0223 | 0.0014 | 0.0002 | 0.003 | 0.0031 | 0.0082 | 0.0003 | 0.0007 | 0.0007 | 0.0009 | 0.0135 | 0.0004 | 0.0047 | 0.0013 | 0.0013 | 0.0002 | 0.007 | 0.0031 |
Vacuole Periphery | 0.0077 | 0.0007 | 0.0002 | 0.0015 | 0.0052 | 0.0049 | 0.0007 | 0.0003 | 0.0006 | 0.0009 | 0.0074 | 0.0004 | 0.0041 | 0.0003 | 0.0014 | 0.0002 | 0.0025 | 0.0017 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 436.2066 | 410.3254 | 372.8719 | 333.0201 | 335.4805 | 457.7634 | 413.5355 | 358.6379 | 344.4213 | 356.2968 |
Translational Efficiency | 1.7295 | 1.8796 | 1.8095 | 1.8158 | 2.1107 | 2.0059 | 1.815 | 1.9773 | 1.8784 | 1.9757 |
Dataset | Hit |
---|---|
Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|