Standard name | |
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Human Ortholog | |
Description | Methyltransferase that methylates residue G1575 of 18S rRNA; required for rRNA processing and nuclear export of 40S ribosomal subunits independently of methylation activity; diploid mutant displays random budding pattern; functional homolog of human WBSCR22 |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | – | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 3 | 1 | 1 | 0 | 0 | 0 | 2 | 0 |
Bud | – | 0 | 1 | 2 | 1 | 4 | 6 | 8 | 4 | 9 | 9 | 13 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 6 | 2 | 9 | 18 | 21 |
Bud Neck | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 |
Bud Site | – | 0 | 0 | 0 | 0 | 6 | 8 | 3 | 9 | 10 | 4 | 13 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | – | 6 | 4 | 16 | 13 | 23 | 26 | 49 | 24 | 41 | 39 | 46 | 18 | 54 | 65 | 37 | 53 | 58 | 4 | 4 | 2 | 4 | 18 | 32 |
Endoplasmic Reticulum | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 7 | 10 | 13 | 0 | 0 | 1 | 1 | 2 | 4 |
Endosome | – | 6 | 11 | 36 | 8 | 5 | 12 | 23 | 6 | 10 | 5 | 15 | 13 | 36 | 16 | 58 | 41 | 23 | 8 | 10 | 11 | 10 | 23 | 37 |
Golgi | – | 1 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 8 | 1 | 8 | 19 | 28 | 0 | 1 | 0 | 0 | 0 | 2 |
Mitochondria | – | 2 | 1 | 4 | 15 | 114 | 194 | 229 | 141 | 215 | 186 | 260 | 0 | 0 | 0 | 2 | 12 | 5 | 0 | 1 | 0 | 0 | 2 | 1 |
Nucleus | – | 5 | 3 | 17 | 157 | 169 | 116 | 179 | 139 | 136 | 164 | 174 | 28 | 21 | 77 | 24 | 28 | 18 | 5 | 25 | 16 | 21 | 38 | 37 |
Nuclear Periphery | – | 0 | 0 | 0 | 1 | 2 | 1 | 5 | 0 | 6 | 0 | 3 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 3 |
Nucleolus | – | 19 | 13 | 65 | 75 | 60 | 74 | 123 | 65 | 69 | 74 | 90 | 17 | 33 | 20 | 55 | 65 | 56 | 11 | 27 | 22 | 25 | 22 | 28 |
Peroxisomes | – | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | – | 0 | 0 | 0 | 1 | 3 | 3 | 17 | 2 | 10 | 1 | 13 | 0 | 0 | 2 | 2 | 4 | 6 | 18 | 10 | 22 | 11 | 18 | 23 |
Vac/Vac Membrane | – | 32 | 12 | 48 | 39 | 41 | 67 | 83 | 40 | 54 | 41 | 49 | 50 | 100 | 99 | 179 | 151 | 161 | 1 | 4 | 4 | 10 | 41 | 52 |
Unique Cell Count | 60 | 39 | 160 | 267 | 335 | 381 | 579 | 320 | 415 | 409 | 493 | 110 | 217 | 256 | 292 | 302 | 295 | 56 | 96 | 90 | 99 | 204 | 255 | |
Labelled Cell Count | 72 | 45 | 193 | 310 | 427 | 508 | 719 | 430 | 561 | 523 | 678 | 129 | 253 | 282 | 373 | 387 | 370 | 56 | 96 | 90 | 99 | 204 | 255 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | – | 14.2 | 9.5 | 12.4 | 9.3 | 6.9 | 5.9 | 6.0 | 6.1 | 5.4 | 5.7 | 5.6 | 13.9 | 14.7 | 13.1 | 13.8 | 14.1 | 15.3 | 15.0 | 15.4 | 15.4 |
Std Deviation (1e-4) | – | 4.6 | 3.2 | 3.7 | 2.9 | 2.1 | 1.7 | 1.8 | 1.8 | 1.7 | 1.7 | 1.9 | 4.2 | 4.1 | 4.6 | 3.2 | 3.4 | 3.8 | 4.7 | 5.0 | 4.7 |
Intensity Change (Log2) | – | – | – | 0.38 | -0.03 | -0.45 | -0.69 | -0.67 | -0.63 | -0.82 | -0.74 | -0.75 | 0.56 | 0.63 | 0.47 | 0.54 | 0.57 | 0.69 | 0.66 | 0.7 | 0.7 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.9 | 2.0 | 2.1 | 0 | 1.1 | 1.4 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | -0.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -2.4 | -1.7 | 0 | -1.2 | -2.4 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 4.0 | 5.8 | 4.6 | 5.0 | 5.9 | 5.2 | 6.0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 6.0 | 5.1 | 3.0 | 3.1 | 4.3 | 3.2 | 4.0 | 3.5 | 2.3 | 0 | 2.9 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0.8 | -0.7 | -2.3 | -2.0 | -1.8 | -1.9 | -2.6 | -2.3 | -2.3 | -2.4 | -2.7 | 0 | -2.1 | -1.7 | -2.1 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -0.1 | -2.5 | -3.1 | -2.0 | -2.8 | -3.1 | -3.0 | 0 | 0 | 1.6 | 1.8 | 0.9 | 3.6 | 2.3 | 2.8 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | 0.0084 | 0.0011 | 0.0103 | 0.0001 | 0.0001 | 0.0004 | 0.0151 | 0.0001 | 0.0002 | 0.0005 | 0.0008 | 0.0001 | – | – | – | – | – | – |
Bud | 0.001 | 0.0022 | 0.0013 | 0.0014 | 0.0015 | 0.0009 | 0.0006 | 0.001 | 0.0011 | 0.0022 | 0.0015 | 0.0006 | – | – | – | – | – | – |
Bud Neck | 0.0093 | 0.0168 | 0.0108 | 0.0109 | 0.0175 | 0.0131 | 0.0081 | 0.0047 | 0.0096 | 0.0302 | 0.0077 | 0.0114 | – | – | – | – | – | – |
Bud Periphery | 0.0011 | 0.0009 | 0.0014 | 0.0026 | 0.0018 | 0.001 | 0.0009 | 0.0007 | 0.0009 | 0.0019 | 0.0032 | 0.001 | – | – | – | – | – | – |
Bud Site | 0.0116 | 0.0186 | 0.016 | 0.0082 | 0.009 | 0.0046 | 0.0049 | 0.0229 | 0.0205 | 0.0657 | 0.0064 | 0.004 | – | – | – | – | – | – |
Cell Periphery | 0.0006 | 0.0009 | 0.0008 | 0.0022 | 0.0014 | 0.0005 | 0.0005 | 0.0009 | 0.0011 | 0.0016 | 0.0009 | 0.0004 | – | – | – | – | – | – |
Cytoplasm | 0.0574 | 0.0253 | 0.0251 | 0.0052 | 0.0077 | 0.0197 | 0.0725 | 0.0917 | 0.0144 | 0.0194 | 0.0012 | 0.0028 | – | – | – | – | – | – |
Cytoplasmic Foci | 0.0491 | 0.0277 | 0.0184 | 0.0019 | 0.0211 | 0.0231 | 0.0112 | 0.027 | 0.045 | 0.0257 | 0.0048 | 0.0295 | – | – | – | – | – | – |
Eisosomes | 0.0011 | 0 | 0.0001 | 0 | 0 | 0 | 0.0004 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Endoplasmic Reticulum | 0.0118 | 0.0019 | 0.0016 | 0.0005 | 0.0004 | 0.0012 | 0.0067 | 0.0021 | 0.0012 | 0.0013 | 0.0007 | 0.0003 | – | – | – | – | – | – |
Endosome | 0.0759 | 0.0123 | 0.0304 | 0.0059 | 0.0124 | 0.0396 | 0.051 | 0.0033 | 0.0266 | 0.0291 | 0.0041 | 0.0067 | – | – | – | – | – | – |
Golgi | 0.0069 | 0.0037 | 0.007 | 0.0004 | 0.0016 | 0.0045 | 0.004 | 0.0005 | 0.0025 | 0.0025 | 0.0018 | 0.0022 | – | – | – | – | – | – |
Lipid Particles | 0.017 | 0.0035 | 0.0138 | 0.0011 | 0.0072 | 0.0098 | 0.0178 | 0.0028 | 0.0227 | 0.0271 | 0.0089 | 0.015 | – | – | – | – | – | – |
Mitochondria | 0.0027 | 0.0074 | 0.0045 | 0.0003 | 0.0009 | 0.0038 | 0.0044 | 0.0007 | 0.0004 | 0.001 | 0.0011 | 0.0009 | – | – | – | – | – | – |
None | 0.0647 | 0.016 | 0.0017 | 0.0002 | 0.0004 | 0.001 | 0.0106 | 0.0309 | 0.0091 | 0.0012 | 0.0003 | 0.0005 | – | – | – | – | – | – |
Nuclear Periphery | 0.048 | 0.0034 | 0.0055 | 0.013 | 0.0083 | 0.0089 | 0.0644 | 0.0065 | 0.008 | 0.0101 | 0.0966 | 0.0031 | – | – | – | – | – | – |
Nucleolus | 0.1736 | 0.3719 | 0.3988 | 0.3541 | 0.4792 | 0.4077 | 0.2168 | 0.267 | 0.4612 | 0.3784 | 0.3654 | 0.4377 | – | – | – | – | – | – |
Nucleus | 0.3525 | 0.4342 | 0.4165 | 0.535 | 0.294 | 0.3562 | 0.4514 | 0.5128 | 0.3069 | 0.3535 | 0.3773 | 0.3943 | – | – | – | – | – | – |
Peroxisomes | 0.0017 | 0.0008 | 0.0023 | 0.0002 | 0.0005 | 0.001 | 0.0032 | 0.0024 | 0.0012 | 0.0031 | 0.0007 | 0.0079 | – | – | – | – | – | – |
Punctate Nuclear | 0.0811 | 0.0339 | 0.0189 | 0.0171 | 0.1165 | 0.0696 | 0.0244 | 0.0038 | 0.0254 | 0.0223 | 0.1052 | 0.0769 | – | – | – | – | – | – |
Vacuole | 0.0211 | 0.0164 | 0.0139 | 0.0383 | 0.0173 | 0.0305 | 0.0259 | 0.0172 | 0.0408 | 0.022 | 0.0052 | 0.0046 | – | – | – | – | – | – |
Vacuole Periphery | 0.0035 | 0.0011 | 0.0009 | 0.0013 | 0.001 | 0.0031 | 0.0054 | 0.001 | 0.0014 | 0.0011 | 0.0061 | 0.0004 | – | – | – | – | – | – |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 31.3164 | 27.3993 | 40.663 | 28.3146 | 63.9283 | 34.6288 | 29.5102 | 27.234 | 36.4946 | 30.394 |
Translational Efficiency | 3.1018 | 3.652 | 1.8988 | 3.0356 | 1.4187 | 1.5623 | 1.9528 | 1.7492 | 1.0802 | 1.7742 |
Dataset | Hit |
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Protein Concentration | – |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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