Standard name | |
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Human Ortholog | |
Description | Beta subunit of the CAAX farnesyltransferase (FTase); this complex prenylates the a-factor mating pheromone and Ras proteins; required for the membrane localization of Ras proteins and a-factor; homolog of the mammalian FTase beta subunit |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 3 | 1 | 1 | 1 |
Bud | 0 | 1 | 2 | 1 | 0 | 4 | 14 | 5 | 3 | 12 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 2 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 2 | 3 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 1 | 6 | 2 | 2 | 3 | 0 | 3 | 0 | 3 | 2 | 2 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 109 | 191 | 312 | 216 | 199 | 313 | 353 | 280 | 266 | 381 | 245 | 271 | 303 | 436 | 505 | 216 | 226 | 210 | 161 | 163 | 351 | 324 | 330 | 394 |
Endoplasmic Reticulum | 0 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 6 | 3 | 9 | 10 | 10 | 3 | 1 | 5 | 1 | 2 | 2 |
Endosome | 3 | 0 | 12 | 10 | 7 | 2 | 9 | 3 | 5 | 6 | 1 | 0 | 17 | 5 | 2 | 9 | 7 | 2 | 0 | 1 | 2 | 2 | 4 | 5 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 1 | 2 | 4 |
Mitochondria | 6 | 1 | 7 | 25 | 23 | 118 | 167 | 130 | 126 | 261 | 176 | 157 | 0 | 0 | 1 | 0 | 3 | 3 | 0 | 1 | 4 | 2 | 1 | 6 |
Nucleus | 2 | 5 | 4 | 11 | 10 | 11 | 22 | 20 | 18 | 29 | 18 | 13 | 27 | 34 | 20 | 8 | 3 | 9 | 9 | 25 | 15 | 22 | 15 | 13 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 1 |
Nucleolus | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 3 |
Vac/Vac Membrane | 41 | 5 | 95 | 103 | 56 | 96 | 113 | 120 | 114 | 142 | 79 | 64 | 111 | 128 | 137 | 95 | 103 | 77 | 4 | 6 | 8 | 11 | 13 | 14 |
Unique Cell Count | 145 | 195 | 377 | 311 | 263 | 459 | 547 | 449 | 433 | 663 | 431 | 426 | 401 | 529 | 594 | 286 | 291 | 271 | 186 | 205 | 407 | 380 | 383 | 461 |
Labelled Cell Count | 162 | 205 | 435 | 366 | 296 | 545 | 686 | 562 | 534 | 836 | 522 | 518 | 459 | 612 | 670 | 339 | 357 | 315 | 186 | 205 | 407 | 380 | 383 | 461 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.6 | 7.3 | 6.3 | 5.8 | 5.9 | 5.3 | 5.0 | 5.3 | 5.0 | 4.8 | 4.5 | 4.6 | 7.7 | 7.7 | 7.3 | 7.8 | 8.0 | 7.5 | 7.5 | 7.8 | 8.1 |
Std Deviation (1e-4) | 0.9 | 1.0 | 1.4 | 1.3 | 1.7 | 1.6 | 1.4 | 1.6 | 1.2 | 1.0 | 1.1 | 1.1 | 1.0 | 1.1 | 0.9 | 1.2 | 1.7 | 1.2 | 1.3 | 1.2 | 1.2 |
Intensity Change (Log2) | – | – | – | -0.13 | -0.1 | -0.25 | -0.32 | -0.25 | -0.34 | -0.39 | -0.49 | -0.45 | 0.28 | 0.28 | 0.22 | 0.31 | 0.34 | 0.25 | 0.25 | 0.31 | 0.37 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 2.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -4.1 | -2.2 | -4.8 | -6.1 | -6.5 | -6.7 | -8.3 | -7.9 | -6.1 | -2.5 | -0.1 | 0.9 | -2.3 | -1.6 | -1.7 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | -0.4 | -3.1 | -1.5 | -2.7 | -2.0 | 0 | 0 | 0 | 0.8 | -2.4 | -3.6 | 0 | -0.6 | -2.1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 3.8 | 4.1 | 9.6 | 11.0 | 10.4 | 10.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 2.2 | 2.3 | 1.4 | 2.7 | 2.9 | 2.7 | 2.9 | 2.7 | 2.0 | 4.0 | 4.0 | 2.3 | 1.7 | 0 | 2.0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 2.3 | -1.1 | -1.5 | -1.6 | 0.5 | 0.4 | -1.4 | -2.4 | -3.6 | 0.8 | -0.3 | -0.8 | 2.3 | 2.9 | 0.9 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.68 | 3.7157 | 3.1628 | 2.9911 | 2.55 | 3.1604 | 1.8452 | 2.0653 | 2.0453 | 1.9719 | 1.5698 | 2.1106 | 1.6324 | 2.132 | 1.6864 | 1.7118 | 1.6493 | 1.5379 |
Actin | 0.0003 | 0.0011 | 0.0006 | 0.0012 | 0.0002 | 0.0003 | 0.0554 | 0.0009 | 0.0113 | 0.0551 | 0.0276 | 0.0302 | 0.0371 | 0.0021 | 0.0084 | 0.0004 | 0.0009 | 0.0044 |
Bud | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0008 | 0.0083 | 0.0065 | 0.0004 | 0.0011 | 0.0009 | 0.0003 | 0.0061 | 0.0009 | 0.0002 | 0.0001 | 0.0002 |
Bud Neck | 0.0002 | 0.0004 | 0.0003 | 0.0006 | 0.0012 | 0.0017 | 0.0028 | 0.0004 | 0.0019 | 0.0019 | 0.0028 | 0.003 | 0.0018 | 0.0003 | 0.001 | 0.0004 | 0.0009 | 0.0017 |
Bud Periphery | 0 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0.0009 | 0.0016 | 0.0035 | 0.0005 | 0.0011 | 0.0012 | 0.0003 | 0.0019 | 0.0012 | 0 | 0 | 0.0001 |
Bud Site | 0.0002 | 0.0014 | 0.0004 | 0.0003 | 0.0001 | 0.0002 | 0.0069 | 0.008 | 0.0052 | 0.0022 | 0.0039 | 0.0016 | 0.0009 | 0.003 | 0.0005 | 0.0002 | 0.0003 | 0.0002 |
Cell Periphery | 0 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0.0002 | 0.0002 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0 |
Cytoplasm | 0.7125 | 0.7409 | 0.7132 | 0.7447 | 0.6549 | 0.7054 | 0.6095 | 0.8326 | 0.7274 | 0.6832 | 0.6232 | 0.7165 | 0.7275 | 0.8109 | 0.7296 | 0.6708 | 0.6672 | 0.7683 |
Cytoplasmic Foci | 0.0039 | 0.0047 | 0.0045 | 0.005 | 0.0031 | 0.0146 | 0.0521 | 0.0077 | 0.0267 | 0.0477 | 0.0483 | 0.0251 | 0.0111 | 0.0065 | 0.0085 | 0.0039 | 0.0208 | 0.007 |
Eisosomes | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0.0006 | 0 | 0.0002 | 0.0001 | 0.0003 | 0.0001 | 0.0003 | 0 | 0.0001 | 0 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0035 | 0.0035 | 0.0049 | 0.0044 | 0.0019 | 0.0031 | 0.0057 | 0.0037 | 0.0039 | 0.0023 | 0.0025 | 0.0046 | 0.0057 | 0.0035 | 0.0062 | 0.0025 | 0.0041 | 0.0037 |
Endosome | 0.0014 | 0.002 | 0.0033 | 0.0035 | 0.0007 | 0.0045 | 0.0421 | 0.003 | 0.0137 | 0.0106 | 0.0209 | 0.0103 | 0.0173 | 0.0013 | 0.0074 | 0.0011 | 0.0118 | 0.0057 |
Golgi | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0 | 0.0002 | 0.0079 | 0.0003 | 0.0093 | 0.0071 | 0.0251 | 0.0038 | 0.0054 | 0.0002 | 0.0012 | 0.0001 | 0.0003 | 0.0006 |
Lipid Particles | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0003 | 0.016 | 0.0002 | 0.0076 | 0.01 | 0.0208 | 0.0042 | 0.0085 | 0.0002 | 0.0027 | 0 | 0.0002 | 0.0003 |
Mitochondria | 0.0001 | 0.0003 | 0.0003 | 0.0004 | 0.0001 | 0.0003 | 0.0057 | 0.0007 | 0.0049 | 0.0016 | 0.0516 | 0.0029 | 0.0022 | 0.0005 | 0.0014 | 0.0003 | 0.0003 | 0.0005 |
None | 0.2639 | 0.1791 | 0.2338 | 0.1831 | 0.3055 | 0.2132 | 0.1024 | 0.0899 | 0.1034 | 0.0308 | 0.0325 | 0.0863 | 0.0743 | 0.1069 | 0.1537 | 0.1845 | 0.1709 | 0.091 |
Nuclear Periphery | 0.0016 | 0.0034 | 0.0075 | 0.0046 | 0.0008 | 0.0024 | 0.014 | 0.0032 | 0.0038 | 0.0043 | 0.0047 | 0.0061 | 0.0097 | 0.0032 | 0.0056 | 0.0037 | 0.0074 | 0.0062 |
Nucleolus | 0.0001 | 0.0005 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0007 | 0.0004 | 0.0002 | 0.0003 | 0.0084 | 0.0015 | 0.0009 | 0.0004 | 0.0001 | 0.0001 | 0.0007 | 0.0007 |
Nucleus | 0.0098 | 0.0512 | 0.0263 | 0.0456 | 0.0285 | 0.047 | 0.0343 | 0.0338 | 0.0463 | 0.078 | 0.0696 | 0.0739 | 0.0636 | 0.0484 | 0.0597 | 0.1287 | 0.0832 | 0.0977 |
Peroxisomes | 0 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0009 | 0.0227 | 0.0004 | 0.0175 | 0.0522 | 0.0451 | 0.0042 | 0.0204 | 0.0002 | 0.0066 | 0.0001 | 0.0003 | 0.0003 |
Punctate Nuclear | 0.0013 | 0.0095 | 0.0027 | 0.0047 | 0.0021 | 0.0045 | 0.0132 | 0.0031 | 0.0048 | 0.0104 | 0.0064 | 0.0218 | 0.0104 | 0.0033 | 0.0035 | 0.0023 | 0.0284 | 0.01 |
Vacuole | 0.0009 | 0.001 | 0.0011 | 0.0009 | 0.0003 | 0.0008 | 0.0044 | 0.0014 | 0.0014 | 0.0009 | 0.0019 | 0.0013 | 0.0019 | 0.0009 | 0.0011 | 0.0005 | 0.0017 | 0.001 |
Vacuole Periphery | 0.0001 | 0.0001 | 0.0003 | 0.0002 | 0 | 0.0001 | 0.0017 | 0.0002 | 0.0004 | 0.0002 | 0.0019 | 0.0004 | 0.0006 | 0.0002 | 0.0003 | 0.0001 | 0.0003 | 0.0003 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 10.2167 | 8.372 | 11.86 | 15.3745 | 14.3503 | 12.7638 | 10.5812 | 13.5041 | 13.4202 | 16.2951 |
Translational Efficiency | 0.8512 | 0.7639 | 0.7986 | 0.7751 | 0.7112 | 0.844 | 0.9199 | 0.6686 | 1.0159 | 0.7641 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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