Standard name | |
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Human Ortholog | |
Description | ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; required for prospore membrane formation; regulates phospholipase Spo14p; shares functional similarity with Glo3p; GCS1 has a paralog, SPS18, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 3 | 4 | 0 | 2 | 5 | 2 | 9 | 12 | 8 | 1 | 1 | 13 | 0 | 1 | 0 | 0 | 0 | 0 | 9 | 3 | 1 | 0 | 1 | 0 |
Bud | 4 | 3 | 1 | 0 | 0 | 0 | 3 | 1 | 5 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 13 | 1 | 2 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 3 | 5 | 1 | 2 | 5 | 2 | 4 | 17 | 8 | 3 | 3 | 15 | 2 | 4 | 2 | 14 | 3 | 23 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 197 | 243 | 105 | 162 | 178 | 187 | 196 | 201 | 122 | 76 | 97 | 83 | 107 | 148 | 164 | 273 | 243 | 293 | 152 | 238 | 127 | 91 | 160 | 184 |
Endoplasmic Reticulum | 11 | 21 | 14 | 14 | 12 | 30 | 30 | 46 | 15 | 8 | 9 | 10 | 4 | 0 | 1 | 2 | 5 | 7 | 32 | 9 | 13 | 6 | 6 | 4 |
Endosome | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 0 | 0 | 2 | 0 | 0 | 1 | 3 | 3 | 5 | 0 | 0 | 1 |
Golgi | 4 | 4 | 2 | 2 | 6 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 1 | 2 | 4 | 2 | 3 | 0 | 0 | 0 |
Mitochondria | 3 | 2 | 0 | 0 | 2 | 3 | 20 | 12 | 26 | 17 | 37 | 20 | 0 | 0 | 0 | 2 | 1 | 1 | 5 | 1 | 4 | 2 | 0 | 1 |
Nucleus | 0 | 0 | 0 | 2 | 0 | 5 | 1 | 6 | 2 | 2 | 2 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
Nucleolus | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 6 | 2 | 6 | 22 | 7 | 11 | 31 | 2 | 18 | 11 | 29 | 3 | 0 | 0 | 16 | 7 | 2 | 1 | 5 | 12 | 1 | 5 | 4 |
Unique Cell Count | 217 | 266 | 122 | 185 | 217 | 229 | 255 | 299 | 167 | 120 | 150 | 151 | 114 | 149 | 168 | 293 | 252 | 305 | 235 | 273 | 179 | 105 | 181 | 204 |
Labelled Cell Count | 226 | 288 | 126 | 192 | 230 | 237 | 276 | 329 | 188 | 128 | 163 | 174 | 116 | 155 | 171 | 311 | 260 | 331 | 235 | 273 | 179 | 105 | 181 | 204 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 16.2 | 23.6 | 17.0 | 16.4 | 15.5 | 13.2 | 12.1 | 12.7 | 10.9 | 9.8 | 9.9 | 10.2 | 17.5 | 20.0 | 19.2 | 26.7 | 26.5 | 27.0 | 18.2 | 19.0 | 20.6 |
Std Deviation (1e-4) | 5.6 | 4.0 | 3.2 | 2.6 | 2.7 | 2.4 | 2.4 | 2.2 | 2.2 | 1.7 | 1.9 | 2.0 | 4.0 | 3.3 | 3.7 | 6.9 | 6.1 | 5.8 | 3.2 | 3.8 | 4.0 |
Intensity Change (Log2) | – | – | – | -0.05 | -0.13 | -0.36 | -0.49 | -0.42 | -0.64 | -0.79 | -0.77 | -0.73 | 0.04 | 0.24 | 0.18 | 0.65 | 0.64 | 0.67 | 0.1 | 0.16 | 0.28 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.3 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 2.2 | 0 | 0 | 0 | 3.2 | 0 | 0 | 0 | 0 | 0 | 2.7 |
Cytoplasm | 0.4 | -1.0 | -1.1 | -2.1 | -3.9 | -2.7 | -4.1 | -4.0 | -5.5 | 2.0 | 4.4 | 3.7 | 2.3 | 3.7 | 3.7 |
Endoplasmic Reticulum | -1.2 | -2.0 | 0.4 | 0.1 | 1.0 | -0.7 | -1.3 | -1.6 | -1.4 | -2.3 | -4.2 | -4.1 | 0 | -3.9 | -4.0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 3.2 | 0 | 4.6 | 4.3 | 5.9 | 4.2 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 2.9 | 0 | 0 | 3.0 | 0 | 3.8 | 2.2 | 4.5 | 0 | 0 | 0 | 1.7 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | 0.0293 | 0.0035 | 0.0134 | 0.0126 | 0.0021 | 0.0036 | 0.0042 | 0.0008 | 0.0029 | 0.0026 | 0.0013 | 0.0023 | 0.1099 | 0.002 | 0.0516 | 0.6818 | 0.0054 | 0.0143 |
Bud | 0.0024 | 0.0008 | 0.0033 | 0.002 | 0.0005 | 0.0003 | 0.0003 | 0.0003 | 0.0008 | 0.001 | 0.0002 | 0.0003 | 0.0004 | 0.0003 | 0.0018 | 0.0158 | 0.0009 | 0.0009 |
Bud Neck | 0.0011 | 0.0004 | 0.001 | 0.0013 | 0.0006 | 0.0024 | 0.0006 | 0.0005 | 0.0012 | 0.0009 | 0.0008 | 0.002 | 0.0008 | 0.0003 | 0.0016 | 0.0019 | 0.0027 | 0.0038 |
Bud Periphery | 0.003 | 0.0002 | 0.0014 | 0.0022 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0.0007 | 0 | 0.0002 | 0.0004 | 0 | 0.0012 | 0.0614 | 0.0001 | 0.0011 |
Bud Site | 0.0034 | 0.0055 | 0.0045 | 0.0255 | 0.0004 | 0.0002 | 0.0004 | 0.0018 | 0.0006 | 0.0003 | 0.0001 | 0.001 | 0.0017 | 0.0008 | 0.0068 | 0.0034 | 0.0002 | 0.0005 |
Cell Periphery | 0.0014 | 0.0001 | 0.0002 | 0.0005 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0002 | 0.0005 | 0.0001 | 0.0005 | 0.0023 | 0 | 0.0001 |
Cytoplasm | 0.6573 | 0.9256 | 0.8048 | 0.8507 | 0.7362 | 0.8197 | 0.8753 | 0.8878 | 0.8776 | 0.8437 | 0.8643 | 0.8561 | 0.5259 | 0.8803 | 0.7434 | 0.0008 | 0.7883 | 0.8326 |
Cytoplasmic Foci | 0.033 | 0.021 | 0.0396 | 0.0171 | 0.04 | 0.0394 | 0.0229 | 0.0371 | 0.0318 | 0.037 | 0.0263 | 0.0303 | 0.0377 | 0.0383 | 0.0406 | 0.0018 | 0.0571 | 0.0333 |
Eisosomes | 0.001 | 0 | 0 | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0.0007 | 0 | 0.0008 | 0.0057 | 0 | 0 |
Endoplasmic Reticulum | 0.0574 | 0.0098 | 0.0266 | 0.0047 | 0.0155 | 0.0188 | 0.0349 | 0.0244 | 0.0231 | 0.0181 | 0.0347 | 0.0358 | 0.0811 | 0.0285 | 0.0137 | 0.0145 | 0.0095 | 0.0178 |
Endosome | 0.0941 | 0.0203 | 0.0709 | 0.0511 | 0.1452 | 0.0809 | 0.0324 | 0.0313 | 0.0391 | 0.0598 | 0.0561 | 0.048 | 0.0632 | 0.0385 | 0.0741 | 0.0254 | 0.0977 | 0.0624 |
Golgi | 0.0254 | 0.0026 | 0.016 | 0.0109 | 0.0304 | 0.015 | 0.0075 | 0.004 | 0.0076 | 0.0051 | 0.0051 | 0.011 | 0.0211 | 0.0054 | 0.0172 | 0.0698 | 0.0242 | 0.0174 |
Lipid Particles | 0.0093 | 0.0003 | 0.0015 | 0.0007 | 0.0013 | 0.0006 | 0.0012 | 0.003 | 0.0006 | 0.0013 | 0.0003 | 0.0005 | 0.0067 | 0.0001 | 0.0029 | 0.0036 | 0.0002 | 0.0018 |
Mitochondria | 0.0228 | 0.0007 | 0.0047 | 0.007 | 0.0112 | 0.0045 | 0.0059 | 0.0004 | 0.0013 | 0.0009 | 0.001 | 0.0044 | 0.0041 | 0.0005 | 0.0065 | 0.0901 | 0.0026 | 0.0038 |
None | 0.0044 | 0.0008 | 0.0006 | 0.0008 | 0.0005 | 0.0005 | 0.0013 | 0.0004 | 0.0009 | 0.0004 | 0.0006 | 0.0007 | 0.0377 | 0.0003 | 0.0009 | 0.0018 | 0.0006 | 0.0008 |
Nuclear Periphery | 0.0194 | 0.0032 | 0.0028 | 0.0017 | 0.0031 | 0.0039 | 0.0039 | 0.0015 | 0.0021 | 0.0033 | 0.0022 | 0.0016 | 0.0709 | 0.0008 | 0.0036 | 0.0097 | 0.0022 | 0.0037 |
Nucleolus | 0.0005 | 0 | 0 | 0.0002 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0.0001 | 0.0006 | 0 | 0.0001 | 0.0002 | 0 | 0 |
Nucleus | 0.0178 | 0.0022 | 0.0012 | 0.0021 | 0.0017 | 0.0025 | 0.0018 | 0.0018 | 0.0026 | 0.0019 | 0.002 | 0.0016 | 0.019 | 0.0008 | 0.0011 | 0.0008 | 0.0022 | 0.0012 |
Peroxisomes | 0.004 | 0.0005 | 0.002 | 0.0013 | 0.0005 | 0.0006 | 0.0014 | 0.0005 | 0.001 | 0.0016 | 0.0002 | 0.0004 | 0.0019 | 0.001 | 0.0236 | 0.0008 | 0.0009 | 0.0006 |
Punctate Nuclear | 0.002 | 0.0005 | 0.0004 | 0.0003 | 0.0004 | 0.0004 | 0.0005 | 0.0004 | 0.001 | 0.0003 | 0.0003 | 0.0002 | 0.0087 | 0.0001 | 0.0005 | 0.0004 | 0.0005 | 0.0007 |
Vacuole | 0.0071 | 0.0015 | 0.0035 | 0.0049 | 0.0062 | 0.0043 | 0.0039 | 0.0032 | 0.0043 | 0.0168 | 0.0031 | 0.0023 | 0.0033 | 0.0013 | 0.004 | 0.0029 | 0.0027 | 0.0019 |
Vacuole Periphery | 0.0037 | 0.0004 | 0.0014 | 0.0021 | 0.0037 | 0.0023 | 0.0011 | 0.0004 | 0.001 | 0.004 | 0.0015 | 0.0009 | 0.0037 | 0.0005 | 0.0036 | 0.0051 | 0.0019 | 0.0013 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 93.2528 | 99.6622 | 76.0271 | 86.4004 | 102.669 | 85.391 | 84.7584 | 96.9327 | 97.7124 | 99.2665 |
Translational Efficiency | 2.2115 | 1.7051 | 2.107 | 1.7504 | 1.9191 | 2.4823 | 1.842 | 1.791 | 1.6995 | 1.8822 |
Dataset | Hit |
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Protein Concentration | – |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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