Standard name | |
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Human Ortholog | |
Description | Mitochondrial intermembrane space protein of unknown function; required for normal oxygen consumption; contains twin cysteine-x9-cysteine motifs; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 3 | 5 | 0 | 1 | 0 |
Bud | 1 | 0 | 6 | 3 | 5 | 3 | – | 16 | 11 | 19 | 16 | 17 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 4 | 0 | 2 | 8 |
Bud Neck | 2 | 0 | 3 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 0 | 0 | 4 | 5 | 1 | – | 1 | 3 | 0 | 3 | 2 | 0 | 0 | 0 | 10 | 7 | 6 | 0 | 0 | 1 | 0 | 0 | 0 |
Cytoplasm | 350 | 255 | 452 | 428 | 510 | 415 | – | 397 | 214 | 275 | 168 | 230 | 140 | 127 | 142 | 230 | 292 | 230 | 345 | 241 | 390 | 104 | 113 | 154 |
Endoplasmic Reticulum | 2 | 1 | 1 | 0 | 1 | 9 | – | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 3 | 9 | 0 | 0 | 2 | 2 | 0 | 0 | 1 |
Endosome | 0 | 0 | 0 | 1 | 13 | 5 | – | 6 | 2 | 3 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 3 | 5 | 3 | 3 | 0 | 1 | 5 |
Golgi | 0 | 0 | 2 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 0 |
Mitochondria | 17 | 1 | 48 | 157 | 107 | 236 | – | 329 | 266 | 309 | 225 | 285 | 3 | 3 | 0 | 5 | 5 | 1 | 7 | 7 | 24 | 3 | 2 | 3 |
Nucleus | 1 | 1 | 0 | 0 | 1 | 0 | – | 14 | 2 | 2 | 4 | 1 | 0 | 0 | 0 | 2 | 7 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 1 | 0 | 0 | 0 | 0 | – | 4 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 1 | 1 | 1 | 0 | – | 2 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 1 | 2 | 0 | – | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 2 | 1 | 2 | 0 | – | 2 | 2 | 2 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 3 | 0 | 2 | 1 |
Vac/Vac Membrane | 1 | 2 | 0 | 0 | 17 | 17 | – | 42 | 27 | 19 | 12 | 11 | 0 | 0 | 0 | 28 | 9 | 29 | 9 | 6 | 3 | 1 | 2 | 3 |
Unique Cell Count | 362 | 259 | 469 | 468 | 579 | 551 | 652 | 397 | 498 | 325 | 445 | 142 | 129 | 143 | 252 | 307 | 248 | 382 | 277 | 454 | 115 | 131 | 185 | |
Labelled Cell Count | 375 | 261 | 515 | 596 | 664 | 686 | 814 | 528 | 634 | 433 | 554 | 144 | 131 | 144 | 280 | 330 | 270 | 382 | 277 | 454 | 115 | 131 | 185 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.1 | 5.2 | 3.7 | 3.7 | 4.5 | 3.9 | – | 4.0 | 3.5 | 3.7 | 3.6 | 3.5 | 5.1 | 5.2 | 5.3 | 8.2 | 7.5 | 7.8 | 4.9 | 5.7 | 5.7 |
Std Deviation (1e-4) | 0.5 | 0.7 | 1.2 | 1.3 | 1.1 | 0.9 | – | 1.4 | 1.0 | 0.9 | 1.0 | 0.9 | 0.6 | 0.8 | 0.9 | 1.7 | 1.6 | 1.8 | 1.4 | 2.0 | 1.9 |
Intensity Change (Log2) | – | – | – | -0.03 | 0.25 | 0.05 | – | 0.09 | -0.08 | -0.02 | -0.06 | -0.11 | 0.44 | 0.47 | 0.5 | 1.14 | 1.0 | 1.06 | 0.39 | 0.61 | 0.61 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -3.2 | -4.9 | -9.4 | – | -13.7 | -14.8 | -14.8 | -15.0 | -15.5 | 1.3 | 1.2 | 1.8 | -2.9 | -0.9 | -2.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | -3.1 | -2.8 | -4.0 | -4.0 | -4.6 | -5.0 |
Nucleus | 0 | 0 | 0 | – | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 3.7 | 3.8 | – | 5.6 | 5.7 | 4.3 | 0 | 3.4 | 0 | 0 | 0 | 7.4 | 0 | 7.6 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 0.6733 | 0.8801 | 0.6571 | 0.7559 | 0.1024 | 0.8688 | 0.4218 | 0.6688 | 0.5605 | 0.5298 | 0.2905 | 0.7827 | 2.4543 | 2.6709 | 2.4147 | 2.1717 | 2.3402 | 2.3817 |
Actin | 0.0004 | 0.0004 | 0.001 | 0.0017 | 0.0015 | 0.0018 | 0.001 | 0.0024 | 0.0013 | 0.015 | 0.0003 | 0.0033 | 0.0008 | 0.0004 | 0.0005 | 0.0004 | 0.0096 | 0.0012 |
Bud | 0.0011 | 0.0003 | 0.0001 | 0.0003 | 0.0003 | 0.0005 | 0.001 | 0.0023 | 0.0006 | 0.0003 | 0.0001 | 0.0006 | 0.0003 | 0.0002 | 0.0003 | 0.0001 | 0.0016 | 0.0005 |
Bud Neck | 0.0001 | 0.0002 | 0.0002 | 0.0003 | 0.0003 | 0.0011 | 0.0007 | 0.0012 | 0.0011 | 0.031 | 0.0013 | 0.0061 | 0.0002 | 0.0003 | 0.0003 | 0.0003 | 0.0007 | 0.0027 |
Bud Periphery | 0.0013 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0.0004 | 0.0007 | 0.0022 | 0.0006 | 0.0005 | 0.0001 | 0.0006 | 0.0002 | 0.0002 | 0.0004 | 0.0001 | 0.0014 | 0.0005 |
Bud Site | 0.0005 | 0.0013 | 0.0008 | 0.0002 | 0.0002 | 0.0001 | 0.0049 | 0.0089 | 0.002 | 0.0025 | 0.0004 | 0.0014 | 0.0015 | 0.0015 | 0.001 | 0.0001 | 0.0096 | 0.0006 |
Cell Periphery | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 |
Cytoplasm | 0.5664 | 0.6268 | 0.5844 | 0.515 | 0.566 | 0.6738 | 0.4998 | 0.5772 | 0.5129 | 0.4582 | 0.4994 | 0.5364 | 0.4065 | 0.4463 | 0.3348 | 0.3331 | 0.3311 | 0.4809 |
Cytoplasmic Foci | 0.0095 | 0.0071 | 0.0098 | 0.0079 | 0.0145 | 0.0117 | 0.0124 | 0.0122 | 0.0105 | 0.0066 | 0.0152 | 0.0163 | 0.0081 | 0.0106 | 0.0075 | 0.0059 | 0.0222 | 0.0141 |
Eisosomes | 0.0001 | 0 | 0 | 0.0002 | 0 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0041 | 0.0022 | 0.003 | 0.0038 | 0.0023 | 0.0026 | 0.0038 | 0.0013 | 0.002 | 0.0022 | 0.0018 | 0.0017 | 0.0029 | 0.0018 | 0.0032 | 0.001 | 0.0011 | 0.0015 |
Endosome | 0.0038 | 0.0029 | 0.0039 | 0.0047 | 0.0054 | 0.0031 | 0.0041 | 0.0023 | 0.0026 | 0.0026 | 0.0053 | 0.0042 | 0.004 | 0.0032 | 0.0031 | 0.0009 | 0.0093 | 0.0051 |
Golgi | 0.0002 | 0.0002 | 0.0004 | 0.0003 | 0.0002 | 0.0001 | 0.0004 | 0.0002 | 0.0002 | 0.0002 | 0.0002 | 0.0002 | 0.0002 | 0.0003 | 0.0002 | 0.0001 | 0.0019 | 0.0002 |
Lipid Particles | 0.0003 | 0.0001 | 0.0005 | 0.0004 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0.0006 | 0.0001 | 0.0001 | 0.002 | 0.0002 |
Mitochondria | 0.0004 | 0.0002 | 0.0005 | 0.0004 | 0.0004 | 0.0002 | 0.0007 | 0.0005 | 0.0005 | 0.0004 | 0.0004 | 0.0004 | 0.0003 | 0.0006 | 0.0006 | 0.0003 | 0.0014 | 0.0005 |
None | 0.4022 | 0.3493 | 0.3846 | 0.4561 | 0.3989 | 0.2934 | 0.4566 | 0.3741 | 0.4484 | 0.4681 | 0.4636 | 0.4091 | 0.562 | 0.52 | 0.6284 | 0.6504 | 0.5813 | 0.4745 |
Nuclear Periphery | 0.0016 | 0.0013 | 0.0013 | 0.0018 | 0.0014 | 0.0011 | 0.0017 | 0.0009 | 0.0016 | 0.0022 | 0.001 | 0.0015 | 0.0017 | 0.0014 | 0.0024 | 0.0006 | 0.0009 | 0.0015 |
Nucleolus | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0004 | 0.0004 | 0.0003 | 0.0003 | 0.0002 | 0.0003 | 0.0003 | 0.0003 | 0.0005 | 0.0002 | 0.0006 | 0.0003 |
Nucleus | 0.0029 | 0.0043 | 0.0038 | 0.0033 | 0.0034 | 0.0059 | 0.0054 | 0.0082 | 0.0086 | 0.005 | 0.0057 | 0.0087 | 0.0067 | 0.0086 | 0.0093 | 0.0023 | 0.006 | 0.0084 |
Peroxisomes | 0.0002 | 0.0001 | 0.0025 | 0.0002 | 0.0005 | 0.0003 | 0.0008 | 0.0005 | 0.0005 | 0.0004 | 0.0003 | 0.0005 | 0.0002 | 0.0006 | 0.0003 | 0.0002 | 0.0065 | 0.0005 |
Punctate Nuclear | 0.0033 | 0.0013 | 0.002 | 0.0018 | 0.0027 | 0.0027 | 0.0035 | 0.0033 | 0.005 | 0.0029 | 0.0035 | 0.0074 | 0.0025 | 0.002 | 0.0058 | 0.0037 | 0.0108 | 0.0056 |
Vacuole | 0.0012 | 0.0012 | 0.0007 | 0.0011 | 0.0011 | 0.0007 | 0.0012 | 0.0013 | 0.0009 | 0.001 | 0.001 | 0.0007 | 0.001 | 0.0009 | 0.0011 | 0.0002 | 0.0015 | 0.001 |
Vacuole Periphery | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0.0002 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 1.5074 | 5.39 | 3.9996 | 8.2609 | 11.7263 | 9.0393 | 8.1748 | 6.437 | 8.1602 | 10.7388 |
Translational Efficiency | – | – | – | – | – | – | – | – | – | – |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | – |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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