Standard name | |
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Human Ortholog | |
Description | Specific assembly chaperone for ribosomal protein Rpl4p; binds to an evolutionarily conserved surface extension of nascent Rpl4p and chaperones Rpl4p until its assembly into the pre-ribosome; transcriptionally co-regulated with rRNA and ribosome biosynthesis genes |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 1 | 0 | 4 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 8 | 6 | 4 | 9 | 7 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 3 | 18 | 6 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 31 | 26 | 59 | 19 | 21 | 17 | 37 | 39 | 11 | 9 | 15 | 19 | 51 | 45 | 58 | 55 | 76 | 36 | 12 | 9 | 30 | 4 | 14 | 9 |
Endoplasmic Reticulum | 1 | 0 | 2 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 14 | 14 | 12 | 0 | 0 | 5 | 1 | 1 | 0 |
Endosome | 1 | 2 | 1 | 8 | 7 | 10 | 9 | 19 | 4 | 3 | 1 | 0 | 1 | 2 | 4 | 0 | 2 | 2 | 2 | 1 | 11 | 2 | 6 | 25 |
Golgi | 1 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 16 | 29 | 4 | 1 | 0 | 1 | 0 | 0 | 3 |
Mitochondria | 1 | 0 | 4 | 0 | 0 | 31 | 109 | 40 | 40 | 117 | 135 | 104 | 0 | 0 | 1 | 1 | 5 | 0 | 2 | 0 | 4 | 1 | 2 | 1 |
Nucleus | 45 | 95 | 100 | 196 | 381 | 315 | 376 | 427 | 234 | 376 | 233 | 250 | 93 | 137 | 164 | 99 | 92 | 51 | 160 | 186 | 205 | 115 | 82 | 93 |
Nuclear Periphery | 0 | 0 | 0 | 4 | 0 | 1 | 12 | 6 | 6 | 4 | 5 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 6 | 0 | 0 | 5 |
Nucleolus | 2 | 1 | 4 | 7 | 18 | 26 | 68 | 44 | 22 | 43 | 45 | 38 | 0 | 0 | 3 | 1 | 5 | 4 | 9 | 7 | 23 | 7 | 12 | 16 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 1 | 3 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 12 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 1 | 8 | 4 | 4 | 10 |
Vac/Vac Membrane | 166 | 158 | 204 | 25 | 58 | 48 | 54 | 74 | 53 | 49 | 38 | 54 | 81 | 76 | 32 | 225 | 264 | 177 | 24 | 30 | 90 | 26 | 61 | 86 |
Unique Cell Count | 204 | 226 | 319 | 246 | 466 | 415 | 566 | 594 | 335 | 522 | 393 | 403 | 200 | 237 | 247 | 348 | 406 | 250 | 229 | 250 | 403 | 174 | 201 | 266 |
Labelled Cell Count | 248 | 286 | 377 | 262 | 487 | 453 | 671 | 654 | 373 | 625 | 482 | 485 | 226 | 261 | 268 | 413 | 488 | 290 | 229 | 250 | 403 | 174 | 201 | 266 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 9.8 | 13.6 | 10.7 | 11.8 | 12.1 | 8.1 | 7.0 | 7.8 | 7.4 | 6.6 | 6.2 | 9.2 | 13.0 | 11.8 | 10.8 | 19.1 | 18.1 | 16.9 | 13.4 | 13.6 | 13.9 |
Std Deviation (1e-4) | 1.6 | 2.3 | 2.0 | 4.9 | 8.0 | 2.6 | 2.7 | 4.0 | 1.7 | 1.5 | 1.5 | 13.2 | 2.4 | 2.2 | 3.1 | 4.7 | 3.9 | 4.8 | 2.5 | 2.5 | 2.2 |
Intensity Change (Log2) | – | – | – | 0.14 | 0.18 | -0.4 | -0.6 | -0.45 | -0.54 | -0.69 | -0.77 | -0.21 | 0.29 | 0.14 | 0.02 | 0.83 | 0.76 | 0.66 | 0.33 | 0.35 | 0.38 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 3.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -3.7 | -6.4 | -6.3 | -5.5 | -5.6 | -6.3 | -8.7 | -6.4 | -5.9 | 1.9 | 0.1 | 1.5 | -0.9 | 0.1 | -1.3 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.9 | 2.6 | 3.2 |
Endosome | 0 | 0 | 0 | 0 | 2.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.2 | 4.3 | 0 |
Mitochondria | 0 | 0 | 3.9 | 7.7 | 3.7 | 5.5 | 8.5 | 11.1 | 9.2 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 11.4 | 14.2 | 12.1 | 10.1 | 11.8 | 9.8 | 11.6 | 7.4 | 8.2 | 3.5 | 6.2 | 8.3 | -0.8 | -2.6 | -2.9 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 2.2 | 3.4 | 5.6 | 4.0 | 3.5 | 4.3 | 5.3 | 4.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -12.9 | -15.0 | -14.8 | -17.1 | -16.1 | -12.6 | -16.7 | -15.2 | -14.1 | -5.2 | -7.4 | -12.2 | 0.2 | 0.3 | 1.7 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 11.4205 | 10.1229 | 11.3506 | 10.4725 | 10.8763 | 10.882 | 10.052 | 12.0696 | 11.1589 | 10.4644 | 10.3384 | 10.9546 | 7.2663 | 9.9901 | 8.5593 | 7.9245 | 9.5553 | 8.8289 |
Actin | 0 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0.0085 | 0.0001 | 0.0083 | 0.0012 | 0.0043 | 0.0001 | 0.0284 | 0 | 0.0211 | 0.0287 | 0 | 0 |
Bud | 0.0001 | 0.0003 | 0 | 0.0001 | 0 | 0.0001 | 0.0003 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0002 | 0.001 | 0 | 0.0003 | 0.0002 | 0 | 0.0001 |
Bud Neck | 0.0003 | 0.0006 | 0.0002 | 0.0006 | 0.0011 | 0.0016 | 0.0025 | 0.0002 | 0.0045 | 0.0009 | 0.0004 | 0.0012 | 0.001 | 0.0001 | 0.0011 | 0.0012 | 0.0002 | 0.0007 |
Bud Periphery | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0004 | 0 | 0.0004 | 0.0001 | 0.0001 | 0.0002 | 0.002 | 0 | 0.0003 | 0.0001 | 0 | 0 |
Bud Site | 0.0001 | 0.0009 | 0.0001 | 0.0003 | 0.0001 | 0.0003 | 0.0008 | 0.0002 | 0.0028 | 0.0002 | 0.0002 | 0.0001 | 0.0011 | 0.0001 | 0.0014 | 0.0005 | 0 | 0 |
Cell Periphery | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0.0003 | 0 | 0.0001 | 0.0001 | 0 | 0 |
Cytoplasm | 0.0025 | 0.051 | 0.0069 | 0.0126 | 0.0006 | 0.0026 | 0.0077 | 0.0123 | 0.0109 | 0.0085 | 0.002 | 0.0031 | 0.0186 | 0.0173 | 0.0332 | 0.0116 | 0.0002 | 0.0014 |
Cytoplasmic Foci | 0 | 0.002 | 0.0001 | 0.001 | 0 | 0.0007 | 0.0076 | 0 | 0.0032 | 0.0018 | 0.007 | 0.0002 | 0.0084 | 0 | 0.0022 | 0.0184 | 0 | 0 |
Eisosomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0.0001 | 0 | 0.0001 | 0.0002 | 0 | 0 |
Endoplasmic Reticulum | 0.0004 | 0.0011 | 0.0001 | 0.0034 | 0.0001 | 0.0003 | 0.0043 | 0.0002 | 0.0026 | 0.0014 | 0.0006 | 0.0006 | 0.009 | 0.0001 | 0.0026 | 0.0031 | 0 | 0 |
Endosome | 0.0005 | 0.0061 | 0.0002 | 0.0052 | 0.0001 | 0.0006 | 0.0143 | 0.0002 | 0.0061 | 0.004 | 0.017 | 0.0005 | 0.0221 | 0 | 0.0094 | 0.0066 | 0 | 0 |
Golgi | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0.0021 | 0 | 0.0014 | 0.0007 | 0.0028 | 0 | 0.0036 | 0 | 0.0015 | 0.0019 | 0 | 0 |
Lipid Particles | 0 | 0.0001 | 0 | 0.0002 | 0 | 0.0003 | 0.0081 | 0 | 0.0008 | 0.0033 | 0.008 | 0.0001 | 0.0032 | 0 | 0.0019 | 0.0072 | 0 | 0 |
Mitochondria | 0.0003 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0024 | 0.0003 | 0.0017 | 0.0005 | 0.0183 | 0.0002 | 0.0062 | 0.0002 | 0.0015 | 0.0011 | 0.0002 | 0.0002 |
None | 0 | 0.0053 | 0 | 0.0003 | 0 | 0.0002 | 0.0013 | 0.0001 | 0.0019 | 0.0005 | 0.0013 | 0.0001 | 0.007 | 0 | 0.0038 | 0.0138 | 0 | 0 |
Nuclear Periphery | 0.0055 | 0.0201 | 0.0036 | 0.0068 | 0.0026 | 0.0056 | 0.0404 | 0.0082 | 0.0089 | 0.026 | 0.0051 | 0.0061 | 0.0321 | 0.0051 | 0.0188 | 0.0105 | 0.0017 | 0.0028 |
Nucleolus | 0.0091 | 0.0139 | 0.0107 | 0.0079 | 0.0213 | 0.0296 | 0.0072 | 0.0081 | 0.0063 | 0.0064 | 0.0055 | 0.0168 | 0.0119 | 0.0119 | 0.0062 | 0.0121 | 0.0123 | 0.0098 |
Nucleus | 0.9755 | 0.8759 | 0.9766 | 0.9519 | 0.9722 | 0.9459 | 0.8808 | 0.968 | 0.932 | 0.927 | 0.9197 | 0.966 | 0.8057 | 0.9639 | 0.884 | 0.8589 | 0.9851 | 0.9839 |
Peroxisomes | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0.0014 | 0 | 0.0008 | 0.0003 | 0.0013 | 0 | 0.002 | 0 | 0.0007 | 0.0031 | 0 | 0 |
Punctate Nuclear | 0.002 | 0.0085 | 0.0009 | 0.0029 | 0.0012 | 0.0108 | 0.0045 | 0.0006 | 0.005 | 0.0155 | 0.0041 | 0.0035 | 0.0216 | 0.0008 | 0.0081 | 0.0167 | 0.0001 | 0.0006 |
Vacuole | 0.0028 | 0.012 | 0.0004 | 0.0061 | 0.0004 | 0.0007 | 0.0028 | 0.001 | 0.0012 | 0.001 | 0.0007 | 0.0007 | 0.0106 | 0.0003 | 0.0009 | 0.0024 | 0.0001 | 0.0002 |
Vacuole Periphery | 0.0008 | 0.0014 | 0.0002 | 0.0003 | 0.0001 | 0.0002 | 0.0024 | 0.0003 | 0.0007 | 0.0006 | 0.001 | 0.0002 | 0.0042 | 0.0001 | 0.0008 | 0.0016 | 0.0001 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 52.6108 | 55.0811 | 54.7064 | 46.5422 | 60.2234 | 49.2657 | 45.8392 | 40.7693 | 43.1662 | 51.5061 |
Translational Efficiency | 2.3594 | 1.8024 | 1.6138 | 1.6724 | 1.5951 | 1.6196 | 1.5207 | 1.5496 | 1.2403 | 1.442 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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