Standard name | |
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Human Ortholog | |
Description | Mitochondrial protein of unknown function; similar to Ups1p and Ups2p which are involved in regulation of mitochondrial cardiolipin and phosphatidylethanolamine levels; null is viable but interacts synthetically with ups1 and ups2 mutations; UPS3 has a paralog, UPS2, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 4 | 3 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 4 | 0 | 4 | – | 0 | 1 | 7 | 10 | 1 | 8 | 13 | 10 |
Bud | 2 | 3 | 0 | 1 | 2 | 11 | 2 | 8 | 13 | 13 | 19 | 18 | 2 | 1 | 3 | – | 1 | 1 | 2 | 0 | 1 | 3 | 4 | 10 |
Bud Neck | 1 | 1 | 4 | 0 | 0 | 0 | 0 | 4 | 2 | 4 | 4 | 4 | 2 | 0 | 0 | – | 1 | 2 | 4 | 4 | 1 | 3 | 6 | 10 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 0 | 6 | 4 | 0 | 0 | 0 | – | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 1 | 0 | 2 | 1 | 0 | 5 | 0 | 2 | 3 | 3 | 1 | 2 | 2 | 6 | – | 6 | 7 | 0 | 4 | 1 | 1 | 1 | 4 |
Cytoplasm | 162 | 177 | 84 | 105 | 132 | 69 | 94 | 110 | 66 | 73 | 49 | 36 | 157 | 288 | 321 | – | 170 | 148 | 65 | 102 | 48 | 54 | 107 | 133 |
Endoplasmic Reticulum | 4 | 3 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 24 | 0 | 3 | – | 10 | 12 | 5 | 1 | 2 | 2 | 3 | 4 |
Endosome | 8 | 1 | 1 | 12 | 48 | 5 | 46 | 44 | 15 | 44 | 9 | 31 | 9 | 43 | 37 | – | 7 | 10 | 36 | 17 | 5 | 13 | 20 | 19 |
Golgi | 3 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 4 | 0 | 0 | 1 | 0 | 0 |
Mitochondria | 59 | 35 | 3 | 25 | 26 | 170 | 144 | 222 | 290 | 239 | 258 | 264 | 35 | 19 | 6 | – | 10 | 25 | 154 | 110 | 70 | 112 | 152 | 126 |
Nucleus | 0 | 0 | 0 | 0 | 1 | 11 | 11 | 16 | 11 | 3 | 8 | 7 | 0 | 0 | 1 | – | 3 | 2 | 0 | 0 | 0 | 0 | 1 | 1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 2 | 0 | 0 | 2 | 1 | 1 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 4 | 1 | 0 | 2 | 4 | 2 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 1 | 0 | 0 | 7 | 21 | 0 | 10 | 3 | 1 | 15 | 6 | 15 | 0 | 18 | 8 | – | 3 | 4 | 0 | 0 | 1 | 2 | 1 | 0 |
SpindlePole | 4 | 1 | 5 | 5 | 14 | 9 | 65 | 43 | 29 | 32 | 30 | 44 | 4 | 2 | 7 | – | 2 | 7 | 11 | 6 | 6 | 10 | 24 | 14 |
Vac/Vac Membrane | 26 | 6 | 2 | 6 | 26 | 8 | 47 | 33 | 20 | 43 | 18 | 13 | 6 | 29 | 22 | – | 13 | 4 | 8 | 16 | 2 | 9 | 9 | 20 |
Unique Cell Count | 241 | 215 | 95 | 149 | 239 | 238 | 350 | 397 | 373 | 361 | 326 | 347 | 229 | 368 | 387 | 198 | 194 | 315 | 284 | 148 | 235 | 359 | 365 | |
Labelled Cell Count | 275 | 231 | 101 | 164 | 272 | 287 | 428 | 487 | 456 | 475 | 414 | 438 | 245 | 402 | 418 | 226 | 223 | 315 | 284 | 148 | 235 | 359 | 365 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.1 | 4.2 | 5.1 | 5.8 | 5.9 | 4.1 | 5.2 | 4.9 | 4.3 | 4.5 | 4.2 | 4.4 | 4.8 | 5.2 | 5.3 | 4.7 | 5.5 | 4.9 | 4.4 | 4.5 | 4.5 |
Std Deviation (1e-4) | 0.6 | 0.7 | 1.6 | 7.6 | 2.1 | 1.8 | 2.2 | 1.8 | 1.5 | 1.5 | 1.5 | 1.2 | 0.7 | 1.5 | 1.3 | 0.8 | 1.3 | 1.0 | 1.3 | 1.4 | 1.2 |
Intensity Change (Log2) | – | – | – | 0.2 | 0.21 | -0.31 | 0.04 | -0.06 | -0.25 | -0.16 | -0.26 | -0.21 | -0.08 | 0.02 | 0.05 | -0.12 | 0.11 | -0.05 | -0.2 | -0.19 | -0.19 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 0.4426 | 0.6294 | 0.6379 | 0.1588 | -0.0309 | 0.6507 | 1.5378 | 2.0265 | 1.6799 | 1.7938 | 1.8178 | 1.7667 | 3.9974 | 3.8454 | 3.8128 | 4.5722 | 4.1952 | 4.2062 |
Actin | 0.0227 | 0.0118 | 0.0104 | 0.0023 | 0.006 | 0.0112 | 0.0385 | 0.0119 | 0.0144 | 0.0236 | 0.0133 | 0.0131 | 0.0482 | 0.041 | 0.0911 | 0.0405 | 0.0414 | 0.0403 |
Bud | 0.0015 | 0.004 | 0.0041 | 0.0066 | 0.0011 | 0.0021 | 0.0015 | 0.0059 | 0.0048 | 0.0039 | 0.0054 | 0.0021 | 0.0021 | 0.008 | 0.0047 | 0.0049 | 0.0042 | 0.0017 |
Bud Neck | 0.004 | 0.0021 | 0.0023 | 0.0104 | 0.0021 | 0.0056 | 0.0043 | 0.0017 | 0.0063 | 0.001 | 0.0019 | 0.0094 | 0.0122 | 0.0028 | 0.0023 | 0.0047 | 0.0017 | 0.0063 |
Bud Periphery | 0.0026 | 0.0069 | 0.0115 | 0.0185 | 0.0031 | 0.0052 | 0.0024 | 0.0102 | 0.0098 | 0.0089 | 0.0119 | 0.0044 | 0.0033 | 0.0154 | 0.0096 | 0.0102 | 0.0126 | 0.0043 |
Bud Site | 0.0058 | 0.0239 | 0.0188 | 0.0074 | 0.0037 | 0.0024 | 0.0057 | 0.0361 | 0.021 | 0.0027 | 0.0047 | 0.0031 | 0.0207 | 0.0563 | 0.0218 | 0.0057 | 0.0058 | 0.0018 |
Cell Periphery | 0.0018 | 0.0008 | 0.0013 | 0.0014 | 0.0008 | 0.0009 | 0.0013 | 0.0028 | 0.0021 | 0.0007 | 0.0009 | 0.002 | 0.0027 | 0.0042 | 0.0063 | 0.0038 | 0.0057 | 0.0018 |
Cytoplasm | 0.0343 | 0.0923 | 0.042 | 0.1144 | 0.0445 | 0.0771 | 0.0541 | 0.1325 | 0.0787 | 0.0737 | 0.0937 | 0.0861 | 0.0655 | 0.1689 | 0.1307 | 0.1128 | 0.0536 | 0.0988 |
Cytoplasmic Foci | 0.0997 | 0.151 | 0.0998 | 0.0474 | 0.1207 | 0.1137 | 0.0975 | 0.1244 | 0.0956 | 0.0974 | 0.1234 | 0.1124 | 0.1007 | 0.1289 | 0.0974 | 0.1146 | 0.0653 | 0.0971 |
Eisosomes | 0.0005 | 0.0003 | 0.0005 | 0.0004 | 0.0004 | 0.0004 | 0.001 | 0.0006 | 0.0009 | 0.0003 | 0.0002 | 0.0004 | 0.0008 | 0.0028 | 0.0041 | 0.0042 | 0.0019 | 0.0007 |
Endoplasmic Reticulum | 0.0105 | 0.0041 | 0.0024 | 0.0061 | 0.0062 | 0.0055 | 0.0221 | 0.0071 | 0.0072 | 0.005 | 0.0052 | 0.0083 | 0.0106 | 0.0088 | 0.0066 | 0.0017 | 0.0067 | 0.0072 |
Endosome | 0.2408 | 0.2228 | 0.124 | 0.1321 | 0.1979 | 0.171 | 0.2559 | 0.1842 | 0.2216 | 0.1922 | 0.2149 | 0.1986 | 0.1988 | 0.1748 | 0.1091 | 0.1485 | 0.2099 | 0.1405 |
Golgi | 0.0726 | 0.0951 | 0.0509 | 0.047 | 0.0676 | 0.0711 | 0.0873 | 0.0869 | 0.0861 | 0.0926 | 0.0754 | 0.0945 | 0.1145 | 0.088 | 0.08 | 0.0709 | 0.0937 | 0.0971 |
Lipid Particles | 0.0326 | 0.0195 | 0.0115 | 0.0028 | 0.0627 | 0.0187 | 0.0424 | 0.013 | 0.014 | 0.0092 | 0.006 | 0.0111 | 0.0516 | 0.0086 | 0.0059 | 0.032 | 0.021 | 0.0094 |
Mitochondria | 0.3427 | 0.2631 | 0.5144 | 0.4227 | 0.3311 | 0.4134 | 0.2849 | 0.2683 | 0.3539 | 0.4328 | 0.341 | 0.3708 | 0.2187 | 0.1808 | 0.2938 | 0.2696 | 0.3903 | 0.3262 |
None | 0.0586 | 0.0419 | 0.0489 | 0.1289 | 0.0379 | 0.0513 | 0.0319 | 0.0488 | 0.0251 | 0.0096 | 0.0273 | 0.0235 | 0.0379 | 0.0673 | 0.0953 | 0.0919 | 0.0104 | 0.1169 |
Nuclear Periphery | 0.013 | 0.0022 | 0.0016 | 0.0019 | 0.0061 | 0.0033 | 0.0099 | 0.0043 | 0.002 | 0.0015 | 0.0233 | 0.0019 | 0.0252 | 0.0012 | 0.0017 | 0.0003 | 0.0018 | 0.0008 |
Nucleolus | 0.0018 | 0.001 | 0.0012 | 0.0023 | 0.003 | 0.0008 | 0.0012 | 0.0007 | 0.0008 | 0.0004 | 0.0006 | 0.0006 | 0.0012 | 0.0011 | 0.0007 | 0.0005 | 0.0007 | 0.0003 |
Nucleus | 0.0038 | 0.0018 | 0.0019 | 0.006 | 0.0051 | 0.002 | 0.0024 | 0.0025 | 0.0017 | 0.0011 | 0.0024 | 0.0016 | 0.006 | 0.0016 | 0.0013 | 0.0008 | 0.0015 | 0.0009 |
Peroxisomes | 0.0264 | 0.0332 | 0.0348 | 0.0071 | 0.0713 | 0.0276 | 0.0258 | 0.0307 | 0.0229 | 0.0239 | 0.0324 | 0.0385 | 0.0513 | 0.0177 | 0.0237 | 0.0645 | 0.0337 | 0.036 |
Punctate Nuclear | 0.0044 | 0.0012 | 0.0016 | 0.0013 | 0.0117 | 0.0018 | 0.0048 | 0.0009 | 0.0013 | 0.0012 | 0.0012 | 0.0015 | 0.0012 | 0.0007 | 0.0008 | 0.0006 | 0.0008 | 0.0006 |
Vacuole | 0.0129 | 0.015 | 0.011 | 0.0245 | 0.011 | 0.0094 | 0.0173 | 0.0196 | 0.0229 | 0.0109 | 0.0092 | 0.0095 | 0.0179 | 0.016 | 0.0095 | 0.0144 | 0.0253 | 0.0073 |
Vacuole Periphery | 0.0073 | 0.0061 | 0.005 | 0.0085 | 0.0061 | 0.0054 | 0.0078 | 0.0066 | 0.0069 | 0.0072 | 0.0057 | 0.0068 | 0.0087 | 0.0051 | 0.0037 | 0.0032 | 0.012 | 0.004 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 2.0433 | 7.3065 | 12.1989 | 5.5991 | 6.6232 | 10.2111 | 6.0024 | 4.9861 | 5.2054 | 4.8885 |
Translational Efficiency | 4.2043 | 0.9015 | 0.6618 | 1.7412 | 0.997 | 1.1017 | 1.5709 | 1.9339 | 1.7521 | 1.4306 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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