Standard name | |
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Human Ortholog | |
Description | Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical subtypes (see also HTA2); DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p; N-terminally propionylated in vivo |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | – | – | 4 | 0 | 2 | 0 | 2 | 5 |
Bud | 1 | 0 | 0 | 1 | 1 | 6 | – | 15 | 8 | 13 | 9 | 11 | 0 | 0 | 1 | – | – | – | 5 | 2 | 1 | 0 | 5 | 13 |
Bud Neck | 3 | 1 | 1 | 0 | 3 | 4 | – | 22 | 2 | 7 | 3 | 3 | 0 | 0 | 0 | – | – | – | 2 | 0 | 0 | 0 | 3 | 4 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 1 | 1 | 7 | 1 | 0 | 0 | – | – | – | – | – | – | – | – | – |
Cell Periphery | 3 | 0 | 0 | 3 | 0 | 0 | – | 0 | 2 | 1 | 2 | 3 | 1 | 0 | 1 | – | – | – | 2 | 0 | 1 | 2 | 2 | 3 |
Cytoplasm | 595 | 148 | 178 | 226 | 271 | 365 | – | 570 | 308 | 343 | 255 | 422 | 532 | 661 | 744 | – | – | – | 508 | 134 | 108 | 167 | 383 | 432 |
Endoplasmic Reticulum | 2 | 1 | 0 | 0 | 1 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | – | – | – | 1 | 0 | 0 | 1 | 1 | 4 |
Endosome | 0 | 0 | 0 | 0 | 0 | 1 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | – | – | 3 | 1 | 1 | 1 | 3 | 7 |
Golgi | 1 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | 2 | 2 | 0 | 0 | 3 | 1 |
Mitochondria | 12 | 4 | 3 | 31 | 9 | 79 | – | 136 | 164 | 158 | 190 | 225 | 2 | 2 | 0 | – | – | – | 22 | 6 | 10 | 8 | 20 | 21 |
Nucleus | 1 | 0 | 0 | 0 | 0 | 0 | – | 2 | 1 | 0 | 0 | 3 | 0 | 0 | 1 | – | – | – | 0 | 0 | 0 | 0 | 0 | 1 |
Nuclear Periphery | 1 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | – | – | – | 0 | 0 | 0 | 0 | 0 | 1 |
Nucleolus | 0 | 0 | 0 | 2 | 0 | 0 | – | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 1 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 1 |
SpindlePole | 1 | 0 | 0 | 1 | 5 | 3 | – | 24 | 4 | 6 | 5 | 14 | 1 | 2 | 0 | – | – | – | 6 | 0 | 1 | 1 | 4 | 13 |
Vac/Vac Membrane | 0 | 0 | 0 | 0 | 1 | 4 | – | 1 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | – | – | – | 7 | 3 | 2 | 2 | 10 | 16 |
Unique Cell Count | 610 | 152 | 179 | 232 | 279 | 398 | 649 | 392 | 432 | 373 | 543 | 534 | 665 | 748 | 582 | 154 | 140 | 193 | 449 | 545 | ||||
Labelled Cell Count | 620 | 155 | 182 | 264 | 291 | 462 | 773 | 492 | 530 | 467 | 692 | 537 | 667 | 751 | 582 | 154 | 140 | 193 | 449 | 545 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.4 | 4.0 | 2.8 | 2.9 | 3.5 | 2.8 | – | 2.9 | 2.2 | 2.6 | 2.5 | 2.4 | 4.0 | 4.0 | 4.0 | 4.6 | 4.4 | 4.6 | 3.6 | 4.0 | 4.2 |
Std Deviation (1e-4) | 0.6 | 1.0 | 0.7 | 1.7 | 1.8 | 1.3 | – | 1.3 | 0.8 | 1.0 | 0.9 | 0.9 | 1.4 | 1.1 | 1.3 | 1.3 | 1.1 | 1.7 | 0.6 | 1.2 | 1.8 |
Intensity Change (Log2) | – | – | – | 0.05 | 0.32 | -0.0 | – | 0.06 | -0.31 | -0.11 | -0.16 | -0.2 | 0.53 | 0.55 | 0.53 | 0.72 | 0.66 | 0.74 | 0.38 | 0.51 | 0.62 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -0.5464 | -0.2754 | -0.6241 | -0.3826 | -0.3272 | -0.5999 | -1.3787 | -1.1759 | -1.348 | -1.6426 | -1.495 | -1.2122 | -0.0987 | 0.1159 | 0.2791 | 0.4529 | 0.6906 | 0.177 |
Actin | 0.0348 | 0.0151 | 0.026 | 0.0195 | 0.0324 | 0.01 | 0.0259 | 0.0003 | 0.0164 | 0.0003 | 0.0007 | 0.0021 | 0.0138 | 0.0031 | 0.0091 | 0.034 | 0.011 | 0.0324 |
Bud | 0.0006 | 0.004 | 0.0004 | 0.0011 | 0.0003 | 0.0004 | 0.0004 | 0.0041 | 0.0008 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0.0044 | 0.0009 | 0.0015 | 0.0133 | 0.0017 |
Bud Neck | 0.0019 | 0.0004 | 0.0006 | 0.0005 | 0.003 | 0.0007 | 0.0027 | 0.0001 | 0.0018 | 0 | 0.0004 | 0.0002 | 0.0133 | 0.0002 | 0.0008 | 0.0045 | 0.0024 | 0.0013 |
Bud Periphery | 0.0008 | 0.0035 | 0.0007 | 0.0056 | 0.0004 | 0.0008 | 0.0008 | 0.0007 | 0.0012 | 0.0005 | 0.0004 | 0.0003 | 0.0008 | 0.006 | 0.0019 | 0.0063 | 0.0148 | 0.0078 |
Bud Site | 0.0039 | 0.0064 | 0.0077 | 0.0028 | 0.0014 | 0.0001 | 0.0043 | 0.0088 | 0.0127 | 0 | 0.0053 | 0.0001 | 0.0096 | 0.0111 | 0.0138 | 0.0017 | 0.0164 | 0.0006 |
Cell Periphery | 0.0003 | 0.0002 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0001 | 0.0004 | 0.0002 | 0.0002 | 0.0007 | 0.0007 | 0.0004 |
Cytoplasm | 0.0308 | 0.0178 | 0.0212 | 0.0095 | 0.0365 | 0.057 | 0.0297 | 0.0363 | 0.0286 | 0.0098 | 0.0151 | 0.0483 | 0.0141 | 0.0295 | 0.03 | 0.0393 | 0.0107 | 0.043 |
Cytoplasmic Foci | 0.031 | 0.0092 | 0.0174 | 0.0069 | 0.0232 | 0.0089 | 0.0284 | 0.006 | 0.0159 | 0.0063 | 0.0074 | 0.0073 | 0.0076 | 0.0011 | 0.0121 | 0.0187 | 0.033 | 0.005 |
Eisosomes | 0.0006 | 0.0002 | 0.0004 | 0.0008 | 0.0003 | 0.0002 | 0.0006 | 0.0003 | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0.0002 | 0.0002 | 0.0002 | 0.0002 | 0.0004 |
Endoplasmic Reticulum | 0.0032 | 0.0005 | 0.0016 | 0.0015 | 0.006 | 0.0007 | 0.0024 | 0.0004 | 0.0011 | 0.0001 | 0.0006 | 0.0004 | 0.0006 | 0.0004 | 0.001 | 0.0014 | 0.0104 | 0.0009 |
Endosome | 0.0086 | 0.0003 | 0.003 | 0.0167 | 0.0487 | 0.0019 | 0.0176 | 0.0003 | 0.0051 | 0.0002 | 0.0048 | 0.0043 | 0.0104 | 0.0005 | 0.0117 | 0.0153 | 0.0231 | 0.0044 |
Golgi | 0.0037 | 0.0006 | 0.0015 | 0.0053 | 0.0171 | 0.0018 | 0.0062 | 0.0001 | 0.0038 | 0.0001 | 0.0016 | 0.0037 | 0.0056 | 0.0003 | 0.0025 | 0.0073 | 0.0114 | 0.0022 |
Lipid Particles | 0.0092 | 0.0008 | 0.0021 | 0.0089 | 0.0351 | 0.0049 | 0.0151 | 0.0002 | 0.0032 | 0.0006 | 0.0072 | 0.0022 | 0.005 | 0.0001 | 0.0043 | 0.0106 | 0.0464 | 0.0018 |
Mitochondria | 0.0112 | 0.0009 | 0.0011 | 0.0225 | 0.0106 | 0.0013 | 0.0037 | 0.0007 | 0.0121 | 0.0018 | 0.002 | 0.0059 | 0.0027 | 0.0014 | 0.0016 | 0.0027 | 0.003 | 0.0022 |
None | 0.8187 | 0.9308 | 0.8979 | 0.8692 | 0.7086 | 0.89 | 0.8255 | 0.936 | 0.8825 | 0.9736 | 0.9344 | 0.9129 | 0.8961 | 0.9405 | 0.899 | 0.8251 | 0.7179 | 0.8867 |
Nuclear Periphery | 0.009 | 0.0006 | 0.0015 | 0.0063 | 0.0256 | 0.0023 | 0.0052 | 0.0002 | 0.0005 | 0.0002 | 0.0024 | 0.0037 | 0.0008 | 0.0002 | 0.001 | 0.0009 | 0.007 | 0.0026 |
Nucleolus | 0.001 | 0.001 | 0.0003 | 0.0015 | 0.0008 | 0.0004 | 0.0007 | 0.001 | 0.0004 | 0.0003 | 0.0009 | 0.0003 | 0.0014 | 0.0002 | 0.0004 | 0.0006 | 0.0014 | 0.0004 |
Nucleus | 0.0057 | 0.0023 | 0.0008 | 0.0051 | 0.0047 | 0.0063 | 0.0015 | 0.0014 | 0.0004 | 0.0003 | 0.0012 | 0.0027 | 0.0043 | 0.0003 | 0.0008 | 0.001 | 0.0073 | 0.0013 |
Peroxisomes | 0.0115 | 0.0008 | 0.0096 | 0.0045 | 0.0313 | 0.0096 | 0.0207 | 0.0003 | 0.0083 | 0.0036 | 0.0122 | 0.0023 | 0.0071 | 0.0001 | 0.0022 | 0.0232 | 0.0549 | 0.0018 |
Punctate Nuclear | 0.012 | 0.0039 | 0.0054 | 0.009 | 0.0068 | 0.002 | 0.0041 | 0.0023 | 0.0033 | 0.0018 | 0.002 | 0.0023 | 0.002 | 0.0002 | 0.004 | 0.001 | 0.0055 | 0.0022 |
Vacuole | 0.0011 | 0.0006 | 0.0003 | 0.0018 | 0.0028 | 0.0003 | 0.0033 | 0.0003 | 0.0008 | 0.0001 | 0.0007 | 0.0006 | 0.0031 | 0.0002 | 0.0019 | 0.0033 | 0.0073 | 0.0006 |
Vacuole Periphery | 0.0006 | 0.0001 | 0.0001 | 0.0009 | 0.0043 | 0.0003 | 0.0009 | 0.0001 | 0.0004 | 0 | 0.0003 | 0.0003 | 0.0007 | 0.0001 | 0.0007 | 0.0006 | 0.0019 | 0.0003 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 1433.8727 | 1048.1792 | 139.4159 | 99.628 | 1077.4409 | 762.8347 | 558.0265 | 304.5096 | 250.5358 | 881.7015 |
Translational Efficiency | 2.2165 | 2.0079 | 1.6007 | 2.6634 | 2.3982 | 3.2635 | 2.2362 | 2.2948 | 1.7935 | 2.3991 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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