Standard name | |
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Human Ortholog | |
Description | Sumo-like domain protein; prevents accumulation of toxic intermediates during replication-associated recombinational repair; roles in silencing, lifespan, chromatid cohesion and the intra-S-phase DNA damage checkpoint; RENi family member |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 |
Bud | 1 | 0 | 0 | 0 | 4 | 3 | 4 | 4 | 3 | 5 | 4 | 3 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 4 | 3 | 3 | 3 | 3 |
Bud Neck | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 1 | 2 | 8 | 3 | 10 | 9 | 17 | 19 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 17 | 12 | 25 | 21 | 33 | 27 | 30 | 38 | 32 | 34 | 24 | 22 | 38 | 85 | 103 | 19 | 26 | 26 | 6 | 9 | 8 | 18 | 9 | 12 |
Endoplasmic Reticulum | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 5 | 3 | 6 | 0 | 0 | 1 | 0 | 0 | 1 |
Endosome | 0 | 0 | 1 | 2 | 6 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 5 | 3 | 6 | 1 | 0 | 3 | 6 | 2 | 7 | 2 | 3 | 4 |
Golgi | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 0 | 5 | 0 | 0 | 3 |
Mitochondria | 177 | 95 | 68 | 42 | 84 | 181 | 174 | 231 | 278 | 347 | 272 | 325 | 0 | 4 | 8 | 2 | 6 | 5 | 3 | 4 | 4 | 11 | 7 | 11 |
Nucleus | 383 | 274 | 253 | 101 | 124 | 153 | 140 | 257 | 302 | 282 | 249 | 266 | 273 | 257 | 252 | 58 | 56 | 59 | 401 | 281 | 266 | 276 | 159 | 151 |
Nuclear Periphery | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 4 | 1 | 3 | 5 | 0 | 1 | 2 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 3 |
Nucleolus | 0 | 0 | 0 | 0 | 3 | 1 | 0 | 3 | 3 | 5 | 5 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 5 | 10 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 1 | 0 | 3 | 2 | 0 | 0 | 2 | 1 | 1 | 4 | 0 | 1 | 0 | 3 | 0 | 1 | 0 | 3 | 5 | 7 | 8 | 6 | 9 |
Vac/Vac Membrane | 16 | 20 | 16 | 5 | 19 | 12 | 9 | 12 | 18 | 17 | 9 | 16 | 12 | 29 | 23 | 14 | 20 | 29 | 67 | 37 | 56 | 58 | 56 | 67 |
Unique Cell Count | 471 | 333 | 321 | 148 | 210 | 251 | 253 | 391 | 449 | 464 | 380 | 424 | 324 | 361 | 380 | 87 | 97 | 114 | 504 | 353 | 369 | 388 | 260 | 290 |
Labelled Cell Count | 597 | 403 | 365 | 176 | 278 | 386 | 360 | 558 | 654 | 710 | 589 | 655 | 331 | 383 | 399 | 99 | 112 | 131 | 504 | 353 | 369 | 388 | 260 | 290 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.8 | 4.5 | 4.6 | 4.5 | 4.5 | 3.8 | 3.9 | 3.9 | 3.8 | 3.5 | 3.3 | 3.4 | 6.2 | 6.1 | 5.6 | 7.0 | 6.7 | 6.8 | 6.3 | 6.5 | 6.7 |
Std Deviation (1e-4) | 0.5 | 0.7 | 1.2 | 1.9 | 1.8 | 1.7 | 2.0 | 1.9 | 1.4 | 1.1 | 1.3 | 1.3 | 1.2 | 1.5 | 1.2 | 1.4 | 1.5 | 1.5 | 1.6 | 1.8 | 1.7 |
Intensity Change (Log2) | – | – | – | -0.03 | -0.04 | -0.27 | -0.24 | -0.22 | -0.27 | -0.39 | -0.49 | -0.45 | 0.45 | 0.42 | 0.29 | 0.61 | 0.55 | 0.56 | 0.47 | 0.51 | 0.55 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | 3.5 | 4.8 | 6.2 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.6139 | 4.6274 | 4.6879 | 4.3121 | 4.1365 | 4.3461 | 2.4773 | 2.4851 | 2.5202 | 1.9407 | 1.905 | 2.3295 | 1.9644 | 2.1149 | 1.7613 | 1.8221 | 1.5441 | 2.1173 |
Actin | 0.005 | 0.0002 | 0.0071 | 0.0011 | 0.001 | 0.006 | 0.0033 | 0 | 0.004 | 0.0045 | 0 | 0 | 0.0018 | 0 | 0 | 0 | 0 | 0 |
Bud | 0.0006 | 0.0002 | 0.0002 | 0.0004 | 0.0023 | 0.0003 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0009 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0.0033 | 0.0004 | 0.0008 | 0.0011 | 0.0004 | 0.0041 | 0.0018 | 0.0002 | 0.0006 | 0.0008 | 0.0018 | 0.0008 | 0.004 | 0.0001 | 0.0001 | 0 | 0.0003 | 0.0004 |
Bud Periphery | 0.0016 | 0.0001 | 0.0006 | 0.0026 | 0.0009 | 0.0011 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0.0074 | 0.0011 | 0.0009 | 0.0009 | 0.0004 | 0.0004 | 0.0002 | 0.0003 | 0.0003 | 0.0019 | 0.0001 | 0 | 0.0003 | 0.0001 | 0 | 0 | 0 | 0 |
Cell Periphery | 0.002 | 0 | 0.0006 | 0.0003 | 0.0003 | 0.0002 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.0069 | 0.0102 | 0.013 | 0.007 | 0.033 | 0.0035 | 0.0015 | 0.0049 | 0.0003 | 0.0002 | 0.0026 | 0.0002 | 0.0029 | 0.0041 | 0.0033 | 0.0001 | 0.0003 | 0.0045 |
Cytoplasmic Foci | 0.0147 | 0.0004 | 0.0014 | 0.0003 | 0.0072 | 0.0011 | 0.0019 | 0.0001 | 0.0002 | 0.0043 | 0.0001 | 0 | 0.0015 | 0 | 0.0001 | 0 | 0 | 0.0032 |
Eisosomes | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0045 | 0.0005 | 0.0045 | 0.0005 | 0.002 | 0.0013 | 0.0016 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0.0003 | 0.0004 | 0.0004 | 0 | 0 | 0 |
Endosome | 0.0145 | 0.0005 | 0.0025 | 0.0046 | 0.007 | 0.0027 | 0.0075 | 0.0002 | 0.0009 | 0.0011 | 0.0004 | 0 | 0.0025 | 0.0002 | 0.0003 | 0 | 0 | 0 |
Golgi | 0.0035 | 0 | 0.0023 | 0.0002 | 0.0006 | 0.0012 | 0.0014 | 0 | 0.0003 | 0.0014 | 0 | 0 | 0.0004 | 0 | 0 | 0 | 0 | 0 |
Lipid Particles | 0.0097 | 0.0001 | 0.0005 | 0.0002 | 0.0062 | 0.0014 | 0.0079 | 0 | 0.0002 | 0.0027 | 0 | 0 | 0.0011 | 0 | 0.0001 | 0 | 0 | 0 |
Mitochondria | 0.0159 | 0.0003 | 0.0019 | 0.018 | 0.0028 | 0.001 | 0.0022 | 0.0001 | 0.0002 | 0.0005 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 |
None | 0.0067 | 0.0116 | 0.0219 | 0.0124 | 0.0358 | 0.0006 | 0.0016 | 0.0027 | 0.0002 | 0.0002 | 0.0002 | 0 | 0.0029 | 0.0029 | 0.0026 | 0 | 0.0001 | 0.0009 |
Nuclear Periphery | 0.0344 | 0.0058 | 0.0089 | 0.0076 | 0.0083 | 0.0055 | 0.009 | 0.0036 | 0.0039 | 0.001 | 0.0021 | 0.0011 | 0.0047 | 0.0068 | 0.0031 | 0.0003 | 0.0014 | 0.0013 |
Nucleolus | 0.0079 | 0.0068 | 0.006 | 0.0161 | 0.0109 | 0.0132 | 0.0058 | 0.0055 | 0.0042 | 0.0032 | 0.0081 | 0.0085 | 0.0031 | 0.0029 | 0.0021 | 0.0032 | 0.008 | 0.0057 |
Nucleus | 0.8035 | 0.9367 | 0.8742 | 0.8989 | 0.8515 | 0.9395 | 0.9407 | 0.9775 | 0.9793 | 0.9687 | 0.9798 | 0.9828 | 0.9555 | 0.9783 | 0.9861 | 0.9961 | 0.9849 | 0.9747 |
Peroxisomes | 0.0077 | 0 | 0.0002 | 0.0001 | 0.0009 | 0.0002 | 0.0009 | 0 | 0.0001 | 0.007 | 0 | 0 | 0.0004 | 0 | 0 | 0 | 0 | 0 |
Punctate Nuclear | 0.0414 | 0.0234 | 0.0509 | 0.004 | 0.0061 | 0.0151 | 0.0098 | 0.004 | 0.0047 | 0.0018 | 0.0042 | 0.0063 | 0.0157 | 0.0035 | 0.0015 | 0.0002 | 0.0048 | 0.0091 |
Vacuole | 0.0055 | 0.0013 | 0.0013 | 0.0207 | 0.0175 | 0.0012 | 0.0013 | 0.0005 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0009 | 0.0004 | 0.0002 | 0 | 0.0001 | 0.0001 |
Vacuole Periphery | 0.0032 | 0.0002 | 0.0003 | 0.0029 | 0.0049 | 0.0003 | 0.0011 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0.0001 | 0 | 0 | 0 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 4.8289 | 7.914 | 9.0758 | 7.7367 | 8.3478 | 4.8262 | 8.5475 | 5.1552 | 8.7137 | 7.4451 |
Translational Efficiency | 1.2664 | 0.8441 | 0.7122 | 0.7905 | 0.5579 | 1.1917 | 0.7604 | 1.2113 | 0.77 | 0.7952 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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