Standard name | |
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Human Ortholog | |
Description | Protein of unknown function; previously annotated as two separate ORFs, YDR474C and YDR475C, which were merged as a result of corrections to the systematic reference sequence; JIP4 has a paralog, YOR019W, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 1 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 1 |
Bud | 0 | 0 | 0 | 0 | 0 | 1 | 2 | – | 2 | 3 | 7 | 3 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 4 | 2 |
Bud Neck | 0 | 0 | 4 | 6 | 8 | 17 | 20 | – | 11 | 17 | 8 | 14 | 1 | 2 | 1 | 6 | 5 | 1 | 2 | 0 | 0 | 0 | 1 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 1 | 1 | 1 | 6 | 0 | – | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 4 | 5 | 4 | 0 | 0 | 0 | 0 | 0 | 1 |
Cytoplasm | 213 | 26 | 98 | 254 | 264 | 310 | 364 | – | 298 | 296 | 194 | 298 | 149 | 314 | 387 | 295 | 271 | 357 | 185 | 57 | 80 | 47 | 112 | 190 |
Endoplasmic Reticulum | 2 | 0 | 0 | 0 | 1 | 4 | 0 | – | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 27 | 26 | 35 | 1 | 0 | 0 | 0 | 0 | 0 |
Endosome | 1 | 0 | 0 | 0 | 0 | 0 | 2 | – | 3 | 0 | 0 | 0 | 0 | 0 | 1 | 7 | 6 | 3 | 5 | 1 | 2 | 0 | 1 | 2 |
Golgi | 0 | 0 | 0 | 2 | 1 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 15 | 1 | 0 | 1 | 0 | 6 | 14 | – | 48 | 47 | 116 | 97 | 1 | 0 | 0 | 8 | 4 | 8 | 32 | 2 | 16 | 0 | 4 | 3 |
Nucleus | 1 | 0 | 0 | 2 | 1 | 0 | 4 | – | 0 | 1 | 0 | 1 | 0 | 0 | 2 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 1 |
Nuclear Periphery | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 1 | 0 | 2 | 7 | – | 9 | 13 | 7 | 21 | 1 | 0 | 0 | 2 | 3 | 3 | 2 | 0 | 2 | 0 | 1 | 2 |
Vac/Vac Membrane | 0 | 0 | 1 | 1 | 2 | 1 | 2 | – | 3 | 0 | 0 | 1 | 0 | 0 | 1 | 4 | 3 | 8 | 5 | 0 | 4 | 0 | 2 | 1 |
Unique Cell Count | 226 | 27 | 99 | 258 | 270 | 324 | 390 | 344 | 347 | 277 | 371 | 152 | 315 | 394 | 313 | 292 | 376 | 245 | 67 | 114 | 53 | 138 | 210 | |
Labelled Cell Count | 234 | 27 | 104 | 268 | 278 | 349 | 415 | 375 | 380 | 336 | 438 | 154 | 317 | 396 | 354 | 329 | 425 | 245 | 67 | 114 | 53 | 138 | 210 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.4 | 4.4 | 4.8 | 4.6 | 5.1 | 4.0 | 4.0 | – | 3.4 | 3.5 | 3.0 | 3.3 | 4.8 | 5.1 | 4.9 | 5.4 | 5.3 | 5.1 | 4.2 | 4.9 | 4.7 |
Std Deviation (1e-4) | 0.6 | 1.9 | 1.1 | 1.1 | 1.8 | 1.0 | 1.2 | – | 0.9 | 0.8 | 0.7 | 1.0 | 1.1 | 1.4 | 1.5 | 1.1 | 1.7 | 1.3 | 1.0 | 1.9 | 1.4 |
Intensity Change (Log2) | – | – | – | -0.07 | 0.09 | -0.26 | -0.27 | – | -0.5 | -0.45 | -0.65 | -0.53 | 0.0 | 0.09 | 0.04 | 0.17 | 0.16 | 0.08 | -0.2 | 0.05 | -0.02 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -1.1381 | -0.491 | -0.8222 | -0.896 | -1.0167 | -0.6877 | -0.9632 | -1.0384 | -0.6635 | -0.8021 | -0.5551 | -0.964 | -1.5558 | -1.7455 | -1.9901 | -1.3452 | -0.3906 | -2.1073 |
Actin | 0.0037 | 0.0002 | 0.0004 | 0.0002 | 0.0002 | 0.0012 | 0.0225 | 0.0013 | 0.0178 | 0.0108 | 0.0026 | 0.0034 | 0.0308 | 0.0002 | 0.002 | 0.0506 | 0.0003 | 0.0007 |
Bud | 0.0002 | 0.0034 | 0.0004 | 0.0001 | 0 | 0 | 0.0008 | 0.0046 | 0.0048 | 0.0003 | 0.0002 | 0.0007 | 0.0007 | 0.0029 | 0.0001 | 0.0057 | 0.0001 | 0.0001 |
Bud Neck | 0.0004 | 0.003 | 0.0001 | 0 | 0 | 0.0003 | 0.012 | 0.0001 | 0.0012 | 0.0002 | 0.0004 | 0.0001 | 0.0026 | 0 | 0.0002 | 0.0089 | 0.0002 | 0 |
Bud Periphery | 0.0004 | 0.0012 | 0.0003 | 0.0002 | 0 | 0 | 0.001 | 0.012 | 0.0116 | 0.0009 | 0.0003 | 0.0036 | 0.0008 | 0.0048 | 0.0002 | 0.0055 | 0.0001 | 0 |
Bud Site | 0.0003 | 0.0034 | 0.0002 | 0 | 0 | 0 | 0.0093 | 0.0092 | 0.0059 | 0.0013 | 0.0005 | 0.0003 | 0.0212 | 0.004 | 0.0008 | 0.0605 | 0.0002 | 0 |
Cell Periphery | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0.0005 | 0.0004 | 0.0008 | 0.0002 | 0.0001 | 0 | 0.0005 | 0.0001 | 0.0002 | 0.0005 | 0.0001 | 0 |
Cytoplasm | 0.0119 | 0.0139 | 0.0092 | 0.0109 | 0.0127 | 0.025 | 0.0119 | 0.0209 | 0.0153 | 0.0227 | 0.01 | 0.0253 | 0.0261 | 0.0274 | 0.0288 | 0.0299 | 0.0547 | 0.0415 |
Cytoplasmic Foci | 0.0037 | 0.0079 | 0.003 | 0.0036 | 0.001 | 0.0041 | 0.018 | 0.0035 | 0.0305 | 0.0078 | 0.0044 | 0.0021 | 0.0621 | 0.0015 | 0.0084 | 0.0505 | 0.0326 | 0.0101 |
Eisosomes | 0.0009 | 0.0004 | 0.0004 | 0.0002 | 0.0001 | 0.0001 | 0.0008 | 0.0012 | 0.0004 | 0.0006 | 0.0002 | 0.0001 | 0.0006 | 0.0003 | 0.0005 | 0.0004 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0012 | 0.0003 | 0.0002 | 0.0003 | 0.0001 | 0.0006 | 0.0082 | 0.0005 | 0.0023 | 0.001 | 0.0002 | 0.0001 | 0.0018 | 0.0003 | 0.0008 | 0.0002 | 0.001 | 0.0003 |
Endosome | 0.0023 | 0.0002 | 0.0001 | 0.0002 | 0 | 0.001 | 0.0306 | 0.0002 | 0.0149 | 0.0041 | 0.0134 | 0.0001 | 0.0244 | 0.0001 | 0.0052 | 0.0018 | 0.2321 | 0.0003 |
Golgi | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0053 | 0.0002 | 0.0087 | 0.0037 | 0.0195 | 0.0001 | 0.0132 | 0 | 0.0131 | 0.0045 | 0.0457 | 0.0001 |
Lipid Particles | 0.0007 | 0.0015 | 0.0003 | 0.0005 | 0.0001 | 0.0002 | 0.0226 | 0.0008 | 0.0148 | 0.0242 | 0.0366 | 0.0002 | 0.0285 | 0.0001 | 0.0084 | 0.0133 | 0.0963 | 0.0002 |
Mitochondria | 0.0027 | 0.0004 | 0.0003 | 0.0003 | 0.0001 | 0.0001 | 0.0043 | 0.0017 | 0.0035 | 0.0469 | 0.1138 | 0.0009 | 0.0164 | 0.0003 | 0.0118 | 0.0018 | 0.0043 | 0.0001 |
None | 0.9504 | 0.9573 | 0.9815 | 0.981 | 0.985 | 0.9583 | 0.8132 | 0.9412 | 0.8405 | 0.8281 | 0.7886 | 0.9572 | 0.7271 | 0.9569 | 0.9132 | 0.7169 | 0.4798 | 0.9428 |
Nuclear Periphery | 0.006 | 0.0003 | 0.0003 | 0.0003 | 0.0001 | 0.0022 | 0.0114 | 0.0002 | 0.0016 | 0.0018 | 0.0003 | 0 | 0.0016 | 0.0001 | 0.0007 | 0.0001 | 0.0007 | 0.0002 |
Nucleolus | 0.0013 | 0.0007 | 0.0003 | 0.0003 | 0.0001 | 0.0002 | 0.0006 | 0.0003 | 0.0008 | 0.0003 | 0.0002 | 0 | 0.0009 | 0.0002 | 0.0007 | 0.0002 | 0.0004 | 0 |
Nucleus | 0.0024 | 0.0022 | 0.0006 | 0.0003 | 0.0001 | 0.001 | 0.0078 | 0.0003 | 0.0014 | 0.0003 | 0.0002 | 0.0001 | 0.0012 | 0.0003 | 0.001 | 0.0003 | 0.0004 | 0.0002 |
Peroxisomes | 0.0003 | 0.0002 | 0.0002 | 0.0003 | 0 | 0.0001 | 0.013 | 0.0006 | 0.0123 | 0.0428 | 0.0055 | 0.0055 | 0.0313 | 0.0001 | 0.0019 | 0.0468 | 0.0279 | 0.0005 |
Punctate Nuclear | 0.0093 | 0.0029 | 0.0019 | 0.0009 | 0.0003 | 0.0053 | 0.0012 | 0.0003 | 0.0078 | 0.001 | 0.0002 | 0.0001 | 0.0034 | 0.0003 | 0.0013 | 0.0014 | 0.0003 | 0.0026 |
Vacuole | 0.0006 | 0.0003 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0034 | 0.0003 | 0.0026 | 0.0006 | 0.0012 | 0 | 0.0037 | 0.0002 | 0.0005 | 0.0002 | 0.0181 | 0.0001 |
Vacuole Periphery | 0.0007 | 0 | 0 | 0 | 0 | 0.0001 | 0.0016 | 0.0001 | 0.0007 | 0.0007 | 0.0017 | 0 | 0.0009 | 0 | 0.0003 | 0.0001 | 0.0048 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 3.5648 | 7.1232 | 5.0075 | 9.0804 | 4.8938 | 8.3831 | 8.3395 | 11.7688 | 11.0845 | 10.0781 |
Translational Efficiency | 0.6906 | 0.4603 | 0.7154 | 0.4894 | 0.8178 | 0.4961 | 0.5404 | 0.5471 | 0.5031 | 0.496 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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