Standard name | |
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Human Ortholog | |
Description | Asn and gln rich protein of unknown function; high-copy suppressor of POL1 (DNA polymerase alpha) and partial suppressor of CDC2 (polymerase delta) and CDC6 (pre-RC loading factor) mutations; overexpression results in growth inhibition; PSP1 has a paralog, YLR177W, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 1 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 5 | 4 |
Bud | 0 | 3 | 1 | 1 | 0 | 2 | 1 | 2 | 5 | 9 | 7 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 1 | 9 | 11 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 3 | 5 | 5 | 5 | 9 | 5 | 8 | 7 | 8 | 11 | 15 | 3 | 3 | 1 | 10 | 18 | 13 | 18 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 239 | 408 | 258 | 221 | 332 | 267 | 294 | 262 | 269 | 247 | 225 | 232 | 286 | 458 | 553 | 285 | 209 | 190 | 229 | 400 | 245 | 186 | 500 | 350 |
Endoplasmic Reticulum | 1 | 2 | 1 | 1 | 1 | 1 | 9 | 1 | 4 | 1 | 3 | 6 | 2 | 5 | 3 | 8 | 6 | 6 | 0 | 1 | 2 | 8 | 16 | 8 |
Endosome | 0 | 1 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 1 | 2 | 1 | 0 | 0 | 1 | 4 | 2 | 1 | 6 | 1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 0 | 0 | 3 | 0 |
Mitochondria | 1 | 1 | 3 | 4 | 11 | 21 | 33 | 42 | 112 | 112 | 109 | 83 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 3 | 8 | 4 | 9 | 6 |
Nucleus | 1 | 5 | 1 | 0 | 0 | 4 | 6 | 4 | 1 | 1 | 5 | 5 | 2 | 1 | 0 | 3 | 2 | 3 | 0 | 2 | 1 | 0 | 0 | 1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 |
SpindlePole | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 1 |
Vac/Vac Membrane | 0 | 8 | 5 | 2 | 16 | 8 | 7 | 23 | 18 | 39 | 26 | 28 | 0 | 1 | 0 | 12 | 17 | 2 | 0 | 7 | 3 | 11 | 13 | 8 |
Unique Cell Count | 241 | 419 | 268 | 229 | 351 | 287 | 341 | 306 | 357 | 354 | 320 | 318 | 290 | 464 | 556 | 303 | 225 | 198 | 238 | 434 | 275 | 224 | 583 | 407 |
Labelled Cell Count | 245 | 434 | 275 | 236 | 372 | 310 | 362 | 343 | 418 | 422 | 396 | 368 | 296 | 467 | 568 | 329 | 249 | 221 | 238 | 434 | 275 | 224 | 583 | 407 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.9 | 7.3 | 6.6 | 6.4 | 7.2 | 6.0 | 6.0 | 6.2 | 5.3 | 5.3 | 5.3 | 5.7 | 7.4 | 7.9 | 7.8 | 9.3 | 10.1 | 9.6 | 6.7 | 6.8 | 7.5 |
Std Deviation (1e-4) | 0.8 | 0.9 | 1.0 | 0.6 | 1.1 | 1.3 | 1.2 | 1.1 | 1.0 | 1.1 | 1.1 | 1.0 | 1.1 | 1.2 | 1.2 | 1.3 | 1.3 | 1.1 | 1.5 | 1.3 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.05 | 0.12 | -0.13 | -0.15 | -0.09 | -0.33 | -0.31 | -0.32 | -0.22 | 0.16 | 0.25 | 0.23 | 0.49 | 0.61 | 0.54 | 0.02 | 0.04 | 0.17 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0.6 | 0 | 0.4 | 0.4 | 0.3 | 1.0 | 1.9 | 0 | 0 | 0 | 0 | 2.5 | 2.3 | 3.6 |
Cytoplasm | 0.1 | -1.0 | -1.7 | -4.2 | -4.4 | -7.1 | -8.4 | -8.2 | -7.6 | 1.8 | 2.2 | 3.4 | -1.2 | -1.7 | -0.2 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 1.7 | 3.6 | 4.4 | 5.6 | 9.7 | 9.7 | 10.1 | 8.5 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 1.8 | 0.7 | 0.2 | 3.1 | 2.1 | 4.4 | 3.4 | 3.6 | 0 | 0 | 0 | 1.5 | 3.0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.5186 | 5.2909 | 4.286 | 4.3296 | 3.837 | 4.2668 | 4.0202 | 4.3165 | 4.1458 | 3.4781 | 3.5813 | 3.86 | 2.8071 | 3.5335 | 3.0281 | 3.0654 | 3.2706 | 2.9463 |
Actin | 0.0571 | 0.0003 | 0.0208 | 0.0162 | 0.0688 | 0.0011 | 0.0782 | 0.0017 | 0.0478 | 0.0672 | 0.006 | 0.0097 | 0.0323 | 0.0024 | 0.0017 | 0.0391 | 0.0213 | 0.002 |
Bud | 0.0004 | 0.0073 | 0.0008 | 0.0009 | 0.0043 | 0.0004 | 0.0023 | 0.001 | 0.002 | 0.0032 | 0.0023 | 0.0019 | 0.0006 | 0.0009 | 0.0003 | 0.001 | 0.0072 | 0.0019 |
Bud Neck | 0.001 | 0.0001 | 0.0037 | 0.0006 | 0.0004 | 0.0158 | 0.0117 | 0.0003 | 0.0132 | 0.0017 | 0.0018 | 0.0032 | 0.0007 | 0.0003 | 0.0003 | 0.0036 | 0.0042 | 0.0016 |
Bud Periphery | 0.0006 | 0.0016 | 0.0009 | 0.0021 | 0.0032 | 0.0006 | 0.003 | 0.0007 | 0.0019 | 0.0041 | 0.0027 | 0.002 | 0.0006 | 0.0004 | 0.0002 | 0.001 | 0.0075 | 0.0015 |
Bud Site | 0.0033 | 0.0082 | 0.0161 | 0.0019 | 0.0008 | 0.0011 | 0.021 | 0.004 | 0.012 | 0.0069 | 0.0565 | 0.0003 | 0.0014 | 0.0119 | 0.0099 | 0.009 | 0.0185 | 0.0013 |
Cell Periphery | 0.0006 | 0.0003 | 0.0006 | 0.0008 | 0.0003 | 0.0004 | 0.0008 | 0.0002 | 0.0004 | 0.0003 | 0.0014 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0.0002 | 0.0007 | 0.0001 |
Cytoplasm | 0.632 | 0.9083 | 0.7996 | 0.7695 | 0.5585 | 0.8673 | 0.5865 | 0.9482 | 0.7677 | 0.7701 | 0.7531 | 0.9317 | 0.6935 | 0.9257 | 0.8815 | 0.6803 | 0.6713 | 0.9053 |
Cytoplasmic Foci | 0.0246 | 0.0034 | 0.0174 | 0.0044 | 0.0172 | 0.0339 | 0.0418 | 0.0093 | 0.0283 | 0.0171 | 0.0303 | 0.014 | 0.0199 | 0.0127 | 0.0175 | 0.0344 | 0.0355 | 0.0131 |
Eisosomes | 0.0022 | 0 | 0.0007 | 0.0014 | 0.0005 | 0 | 0.0007 | 0 | 0.0002 | 0.0003 | 0.0002 | 0 | 0.0012 | 0 | 0 | 0.0004 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0157 | 0.0024 | 0.0073 | 0.0084 | 0.0053 | 0.0036 | 0.0192 | 0.0033 | 0.0052 | 0.0066 | 0.0049 | 0.0052 | 0.0085 | 0.0024 | 0.007 | 0.0065 | 0.0037 | 0.0042 |
Endosome | 0.04 | 0.0013 | 0.0121 | 0.013 | 0.0375 | 0.0046 | 0.0761 | 0.0043 | 0.0292 | 0.0273 | 0.0534 | 0.0116 | 0.0224 | 0.0069 | 0.0259 | 0.0316 | 0.0767 | 0.0155 |
Golgi | 0.0102 | 0.0002 | 0.0042 | 0.0052 | 0.0363 | 0.0012 | 0.0229 | 0.0007 | 0.0301 | 0.02 | 0.0122 | 0.0053 | 0.0069 | 0.0008 | 0.0061 | 0.017 | 0.0357 | 0.0005 |
Lipid Particles | 0.029 | 0 | 0.0053 | 0.0034 | 0.0071 | 0.0119 | 0.0196 | 0.0001 | 0.0043 | 0.0077 | 0.0184 | 0.0003 | 0.0115 | 0.0001 | 0.0034 | 0.0228 | 0.0116 | 0.0002 |
Mitochondria | 0.0088 | 0.0001 | 0.0162 | 0.0879 | 0.157 | 0.0017 | 0.0105 | 0.0013 | 0.0235 | 0.0137 | 0.0246 | 0.0009 | 0.0423 | 0.0003 | 0.0012 | 0.0042 | 0.0124 | 0.0004 |
None | 0.1166 | 0.0642 | 0.0693 | 0.0712 | 0.0855 | 0.0424 | 0.0305 | 0.0196 | 0.022 | 0.0312 | 0.0043 | 0.0071 | 0.1231 | 0.03 | 0.0326 | 0.1075 | 0.0343 | 0.0429 |
Nuclear Periphery | 0.0208 | 0.0003 | 0.0014 | 0.0049 | 0.002 | 0.0003 | 0.0246 | 0.0007 | 0.001 | 0.006 | 0.0016 | 0.0007 | 0.0031 | 0.001 | 0.0032 | 0.0088 | 0.0082 | 0.0034 |
Nucleolus | 0.0037 | 0 | 0.001 | 0.0002 | 0.0001 | 0.0001 | 0.002 | 0.0001 | 0.0002 | 0.0006 | 0.0012 | 0.0003 | 0.0011 | 0.0001 | 0.0002 | 0.0004 | 0.0031 | 0.0001 |
Nucleus | 0.0034 | 0.0008 | 0.0017 | 0.0019 | 0.0014 | 0.001 | 0.0098 | 0.0014 | 0.001 | 0.0024 | 0.0028 | 0.0018 | 0.0026 | 0.0016 | 0.0022 | 0.0014 | 0.0089 | 0.0021 |
Peroxisomes | 0.0083 | 0 | 0.0123 | 0.0006 | 0.0047 | 0.011 | 0.0079 | 0.0006 | 0.0061 | 0.0061 | 0.003 | 0.0007 | 0.0186 | 0.0003 | 0.0018 | 0.0207 | 0.0079 | 0.0002 |
Punctate Nuclear | 0.0156 | 0.0001 | 0.0034 | 0.0006 | 0.0012 | 0.0008 | 0.0182 | 0.0007 | 0.0007 | 0.0021 | 0.0011 | 0.0015 | 0.0059 | 0.0005 | 0.0022 | 0.008 | 0.0141 | 0.0013 |
Vacuole | 0.0039 | 0.001 | 0.0047 | 0.0028 | 0.0064 | 0.001 | 0.0085 | 0.0015 | 0.0024 | 0.004 | 0.0149 | 0.0014 | 0.0027 | 0.0013 | 0.0021 | 0.0014 | 0.015 | 0.0018 |
Vacuole Periphery | 0.0023 | 0.0001 | 0.0006 | 0.0022 | 0.0014 | 0.0002 | 0.004 | 0.0003 | 0.001 | 0.0013 | 0.0031 | 0.0004 | 0.0008 | 0.0002 | 0.0005 | 0.0009 | 0.0024 | 0.0006 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 20.3121 | 20.3054 | 14.7778 | 29.9827 | 23.2205 | 20.0825 | 26.7493 | 27.0476 | 27.8895 | 32.7683 |
Translational Efficiency | 1.1234 | 1.205 | 1.4061 | 0.7927 | 0.9604 | 1.4861 | 0.8981 | 0.9686 | 0.9513 | 0.8061 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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