Standard name | |
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Human Ortholog | |
Description | Subunit of a kinetochore-microtubule binding complex; complex bridges centromeric heterochromatin and kinetochore MAPs and motors; required for sister chromatid bi-orientation and kinetochore binding of SAC components; complex also includes Spc105p; modified by sumoylation |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Bud | 3 | 0 | 5 | 7 | 4 | 4 | 13 | 18 | 12 | 11 | 11 | 13 | 0 | 0 | 0 | 3 | 0 | 1 | 2 | 1 | 1 | 0 | 5 | 11 |
Bud Neck | 8 | 3 | 3 | 5 | 7 | 6 | 6 | 16 | 11 | 5 | 11 | 19 | 6 | 5 | 5 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 4 | 7 |
Bud Site | 10 | 0 | 3 | 10 | 15 | 16 | 21 | 25 | 27 | 21 | 28 | 29 | 6 | 1 | 2 | 5 | 4 | 4 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 5 | 2 | 11 | 20 | 12 | 18 | 20 | 12 | 6 | 14 | 4 | 7 | 26 | 51 | 79 | 21 | 15 | 10 | 0 | 0 | 1 | 1 | 5 | 4 |
Endoplasmic Reticulum | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 18 | 9 | 2 | 4 | 7 | 16 | 3 | 2 | 2 | 1 | 14 | 26 | 36 | 9 | 11 | 10 | 2 | 1 | 14 | 9 | 27 | 27 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 0 | 2 | 0 |
Mitochondria | 32 | 4 | 1 | 16 | 12 | 22 | 35 | 39 | 32 | 46 | 34 | 44 | 0 | 1 | 0 | 9 | 7 | 2 | 0 | 0 | 2 | 1 | 6 | 6 |
Nucleus | 8 | 2 | 6 | 11 | 10 | 14 | 16 | 24 | 14 | 16 | 15 | 16 | 14 | 12 | 22 | 5 | 4 | 6 | 1 | 1 | 0 | 6 | 6 | 13 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 3 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
Nucleolus | 85 | 33 | 91 | 65 | 73 | 99 | 137 | 150 | 140 | 141 | 130 | 155 | 177 | 193 | 198 | 51 | 60 | 60 | 4 | 1 | 2 | 12 | 24 | 19 |
Peroxisomes | 5 | 0 | 15 | 14 | 11 | 17 | 20 | 20 | 11 | 8 | 18 | 22 | 2 | 4 | 9 | 3 | 1 | 6 | 0 | 0 | 1 | 2 | 5 | 5 |
SpindlePole | 115 | 29 | 210 | 179 | 206 | 194 | 262 | 297 | 238 | 197 | 194 | 244 | 273 | 293 | 314 | 78 | 92 | 86 | 143 | 74 | 233 | 206 | 331 | 326 |
Vac/Vac Membrane | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 4 | 1 | 1 | 5 | 1 | 2 | 0 | 0 | 0 | 0 | 4 | 8 |
Unique Cell Count | 157 | 46 | 255 | 233 | 245 | 270 | 365 | 412 | 318 | 304 | 265 | 338 | 341 | 382 | 444 | 117 | 124 | 121 | 159 | 85 | 263 | 248 | 433 | 440 |
Labelled Cell Count | 271 | 74 | 365 | 340 | 353 | 394 | 538 | 619 | 495 | 462 | 447 | 550 | 523 | 591 | 668 | 193 | 199 | 192 | 159 | 85 | 263 | 248 | 433 | 440 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.1 | 5.8 | 5.2 | 4.8 | 5.2 | 4.6 | 4.5 | 4.3 | 4.4 | 4.2 | 4.1 | 4.1 | 6.4 | 6.5 | 6.3 | 7.2 | 6.6 | 6.9 | 6.2 | 6.5 | 6.8 |
Std Deviation (1e-4) | 0.5 | 0.9 | 1.7 | 1.6 | 2.2 | 1.7 | 1.7 | 1.5 | 1.6 | 1.5 | 1.5 | 1.3 | 1.3 | 1.5 | 1.2 | 2.1 | 1.5 | 1.9 | 1.1 | 1.4 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.12 | 0.0 | -0.18 | -0.22 | -0.26 | -0.22 | -0.29 | -0.33 | -0.35 | 0.3 | 0.32 | 0.27 | 0.48 | 0.35 | 0.41 | 0.25 | 0.32 | 0.39 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 3.0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1.9 | 0.3 | 1.2 | 0.7 | -1.0 | -1.7 | 0.2 | -1.9 | -1.6 | 1.7 | 3.8 | 5.1 | 4.4 | 2.8 | 1.6 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | -3.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -1.6 | -0.1 | 0.5 | 0.2 | 0.6 | 0.4 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 1.4 | 1.1 | 1.7 | 1.3 | 2.1 | 1.3 | 1.8 | 1.9 | 1.5 | 1.2 | 0.6 | 1.7 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | -1.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.9 | 3.7 | 2.3 | 1.5 | 2.4 | 2.6 |
Peroxisomes | 0 | -0.7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -3.8 | -3.5 | -2.7 | -1.4 | -2.3 | -0.4 |
SpindlePole | 0 | 0.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -0.7 | -1.7 | -3.4 | -3.4 | -1.9 | -2.5 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 0.1965 | 0.2834 | 0.1321 | 0.2742 | -0.0001 | 0.3152 | 1.1758 | 0.5447 | 0.7913 | 0.6731 | 0.9405 | 0.6083 | 0.619 | 0.4374 | 0.385 | 0.7213 | 0.5815 | 0.4816 |
Actin | 0.0204 | 0 | 0.0004 | 0 | 0.0002 | 0 | 0.0339 | 0 | 0.0054 | 0.0009 | 0.0314 | 0.0044 | 0.0091 | 0 | 0.0056 | 0.0052 | 0.001 | 0.0014 |
Bud | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0.0009 | 0 | 0.0001 | 0.0004 | 0.0004 | 0 | 0.0002 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0001 |
Bud Neck | 0.0009 | 0.0004 | 0.0002 | 0.0004 | 0.0006 | 0.0002 | 0.0019 | 0.0008 | 0.0012 | 0.0007 | 0.0005 | 0.0003 | 0.0005 | 0.0005 | 0.0006 | 0.0007 | 0.0003 | 0.0003 |
Bud Periphery | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0013 | 0 | 0.0002 | 0.0004 | 0.0006 | 0.0001 | 0.0003 | 0.0001 | 0.0003 | 0.0002 | 0.0003 | 0.0001 |
Bud Site | 0.0006 | 0.0004 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0038 | 0.0006 | 0.0013 | 0.0042 | 0.001 | 0.0001 | 0.002 | 0.0045 | 0.0011 | 0.0028 | 0.0004 | 0.0003 |
Cell Periphery | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 |
Cytoplasm | 0.0013 | 0.0001 | 0.0003 | 0.0002 | 0.0001 | 0 | 0.0103 | 0.0003 | 0.0028 | 0.0004 | 0.0013 | 0 | 0.0005 | 0.0001 | 0.0003 | 0.0002 | 0.0009 | 0 |
Cytoplasmic Foci | 0.0196 | 0.0062 | 0.0177 | 0.0174 | 0.0555 | 0.0032 | 0.0472 | 0.0066 | 0.0156 | 0.0188 | 0.0519 | 0.0038 | 0.0284 | 0.0056 | 0.0066 | 0.0215 | 0.0226 | 0.0038 |
Eisosomes | 0.0008 | 0 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0004 | 0 | 0.0001 | 0.0001 | 0 | 0 |
Endoplasmic Reticulum | 0.0015 | 0 | 0.0001 | 0 | 0 | 0 | 0.0061 | 0 | 0.0005 | 0.0002 | 0.0009 | 0.0005 | 0.0004 | 0 | 0.0004 | 0.0002 | 0.0021 | 0 |
Endosome | 0.0068 | 0.0001 | 0.0018 | 0.0001 | 0.0023 | 0.0001 | 0.0556 | 0.0024 | 0.0099 | 0.0426 | 0.0194 | 0.0016 | 0.01 | 0.0001 | 0.003 | 0.0058 | 0.019 | 0.0017 |
Golgi | 0.0023 | 0.0003 | 0.0004 | 0.0002 | 0.0019 | 0.0001 | 0.0229 | 0.0002 | 0.0028 | 0.0161 | 0.0283 | 0.0024 | 0.005 | 0.0001 | 0.0021 | 0.005 | 0.0026 | 0.0023 |
Lipid Particles | 0.0115 | 0.0053 | 0.0073 | 0.0014 | 0.0263 | 0.0014 | 0.0374 | 0.0016 | 0.0082 | 0.028 | 0.0926 | 0.0058 | 0.0259 | 0.0008 | 0.0053 | 0.0292 | 0.0135 | 0.0148 |
Mitochondria | 0.0004 | 0 | 0.0002 | 0 | 0 | 0 | 0.0092 | 0 | 0.0018 | 0.004 | 0.0121 | 0.0012 | 0.0073 | 0 | 0.0062 | 0.0022 | 0.0042 | 0.002 |
None | 0.0127 | 0.0001 | 0.0007 | 0.0001 | 0.0001 | 0.0001 | 0.0046 | 0.0001 | 0.0011 | 0.0002 | 0.0005 | 0.0001 | 0.0008 | 0.0001 | 0.0002 | 0.0005 | 0.0005 | 0.0001 |
Nuclear Periphery | 0.0084 | 0.0002 | 0.0013 | 0.0009 | 0.0006 | 0.0001 | 0.0229 | 0.0004 | 0.0013 | 0.0011 | 0.0079 | 0.007 | 0.0008 | 0.0001 | 0.0008 | 0.0016 | 0.0047 | 0.0004 |
Nucleolus | 0.0214 | 0.0468 | 0.0328 | 0.0107 | 0.0044 | 0.015 | 0.0046 | 0.0883 | 0.0869 | 0.0365 | 0.0035 | 0.0164 | 0.0226 | 0.0468 | 0.0204 | 0.0014 | 0.0032 | 0.0061 |
Nucleus | 0.0047 | 0.0156 | 0.0033 | 0.0057 | 0.0005 | 0.0013 | 0.0114 | 0.0649 | 0.0399 | 0.0035 | 0.0011 | 0.0035 | 0.0029 | 0.0155 | 0.0073 | 0.0005 | 0.0019 | 0.0013 |
Peroxisomes | 0.0046 | 0.0008 | 0.0013 | 0.0006 | 0.0075 | 0.0001 | 0.0172 | 0.0003 | 0.0026 | 0.0123 | 0.0295 | 0.0003 | 0.007 | 0.0004 | 0.0035 | 0.013 | 0.0158 | 0.0067 |
Punctate Nuclear | 0.8813 | 0.9234 | 0.9318 | 0.9622 | 0.8997 | 0.9784 | 0.6996 | 0.8333 | 0.8172 | 0.8268 | 0.7159 | 0.9518 | 0.8744 | 0.9253 | 0.9358 | 0.9094 | 0.8994 | 0.9584 |
Vacuole | 0.0003 | 0 | 0.0001 | 0 | 0 | 0 | 0.0058 | 0.0001 | 0.0007 | 0.002 | 0.0005 | 0.0001 | 0.0011 | 0 | 0.0003 | 0.0002 | 0.0046 | 0.0001 |
Vacuole Periphery | 0.0003 | 0 | 0.0001 | 0 | 0 | 0 | 0.0029 | 0 | 0.0003 | 0.0009 | 0.0005 | 0.0005 | 0.0004 | 0 | 0.0001 | 0.0002 | 0.0029 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 3.335 | 3.4072 | 3.7924 | 6.8912 | 12.3542 | 4.7616 | 8.1818 | 8.4286 | 6.2202 | 9.3212 |
Translational Efficiency | 2.7773 | 1.8154 | 1.2495 | 0.7599 | 0.6547 | 1.8387 | 0.9119 | 0.6151 | 1.1078 | 1.149 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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