Standard name | |
---|---|
Human Ortholog | |
Description | Protein that may act as a chaperone for cytochrome c oxidase subunits; conserved protein; may act as a chaperone in the degradation of misfolded or unassembled cytochrome c oxidase subunits; localized to matrix face of the mitochondrial inner membrane; member of the AAA family but lacks a protease domain |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 1 | 3 | 1 | 3 | 3 | 1 | 3 | 7 |
Bud | 0 | 2 | 7 | 1 | 2 | 3 | 6 | 7 | 9 | 21 | 7 | 17 | 2 | 1 | 2 | 7 | 6 | 3 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 3 | 2 | 6 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | – | – | – | – | – | – |
Cell Periphery | 1 | 19 | 2 | 2 | 1 | 1 | 0 | 0 | 2 | 2 | 2 | 5 | 7 | 10 | 7 | 21 | 8 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 4 | 2 | 4 | 5 | 4 | 2 | 14 | 5 | 3 | 5 | 6 | 9 | 12 | 15 | 21 | 9 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 1 | 2 | 5 | 1 | 0 | 3 | 2 | 1 | 1 | 1 | 2 | 2 | 4 | 4 | 5 | 2 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 1 | 5 | 0 | 2 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 9 | 7 | 6 | 3 | 2 | 2 | 9 | 3 | 4 | 7 | 10 |
Golgi | 0 | 11 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 12 | 27 | 31 | 22 | 34 | 23 | 3 | 24 | 10 | 8 | 21 | 10 |
Mitochondria | 125 | 232 | 144 | 93 | 119 | 103 | 196 | 183 | 205 | 350 | 225 | 261 | 217 | 307 | 248 | 6 | 8 | 3 | 103 | 194 | 111 | 137 | 185 | 172 |
Nucleus | 0 | 1 | 0 | 1 | 1 | 1 | 3 | 3 | 1 | 4 | 3 | 4 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 |
Nuclear Periphery | 11 | 6 | 8 | 1 | 5 | 10 | 21 | 19 | 12 | 37 | 19 | 19 | 8 | 8 | 7 | 9 | 4 | 2 | 0 | 1 | 0 | 1 | 2 | 2 |
Nucleolus | 14 | 7 | 0 | 2 | 4 | 5 | 17 | 7 | 10 | 15 | 10 | 10 | 7 | 4 | 2 | 6 | 4 | 1 | 0 | 0 | 0 | 1 | 1 | 2 |
Peroxisomes | 0 | 3 | 2 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 4 | 12 | 12 | 15 | 2 | 3 | 7 | 5 | 16 | 14 | 22 | 23 |
SpindlePole | 0 | 1 | 0 | 0 | 0 | 1 | 7 | 5 | 1 | 3 | 3 | 2 | 1 | 3 | 0 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
Vac/Vac Membrane | 2 | 34 | 9 | 8 | 11 | 8 | 14 | 6 | 6 | 9 | 8 | 9 | 23 | 39 | 28 | 35 | 16 | 13 | 0 | 10 | 2 | 2 | 4 | 5 |
Unique Cell Count | 129 | 252 | 151 | 99 | 127 | 113 | 204 | 206 | 214 | 362 | 234 | 273 | 248 | 354 | 294 | 134 | 81 | 58 | 122 | 255 | 151 | 175 | 253 | 245 |
Labelled Cell Count | 157 | 329 | 180 | 116 | 152 | 144 | 271 | 248 | 255 | 452 | 286 | 335 | 298 | 438 | 365 | 156 | 97 | 68 | 122 | 255 | 151 | 175 | 253 | 245 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.0 | 7.7 | 6.1 | 5.9 | 5.6 | 4.9 | 4.0 | 4.6 | 4.3 | 4.0 | 4.2 | 4.0 | 7.8 | 7.8 | 7.9 | 8.8 | 10.2 | 11.0 | 7.1 | 7.1 | 8.1 |
Std Deviation (1e-4) | 1.2 | 1.5 | 1.2 | 1.3 | 1.3 | 1.3 | 0.8 | 1.5 | 1.2 | 1.1 | 1.1 | 1.2 | 1.4 | 1.5 | 1.4 | 1.9 | 2.1 | 2.1 | 1.6 | 1.7 | 1.7 |
Intensity Change (Log2) | – | – | – | -0.04 | -0.11 | -0.31 | -0.61 | -0.4 | -0.49 | -0.62 | -0.53 | -0.59 | 0.36 | 0.37 | 0.38 | 0.53 | 0.75 | 0.86 | 0.22 | 0.23 | 0.41 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.2 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4.4 | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 2.5 | 0 | 0 | 0 | 0 | 0 | 0 | 2.0 | 4.4 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.5 | 4.1 | 5.2 | 8.6 | 8.2 |
Mitochondria | -0.5 | -0.6 | -1.4 | 0 | 0 | 0 | 0 | 0 | 0 | -2.6 | -2.9 | -3.4 | -15.3 | -13.1 | -12.8 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | -0.5 | 1.1 | 0 | 0 | 0 | 0 | 0 | 0 | -1.0 | 0 | -1.6 | 0.5 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.5 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0.7 | 0.9 | 0.4 | 0.3 | -1.4 | -1.5 | -1.9 | -1.2 | -1.3 | 1.2 | 1.8 | 1.3 | 4.7 | 3.2 | 3.5 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | 0.0296 | 0.0104 | 0.0102 | 0.0173 | 0.009 | 0.0031 | 0.0087 | 0.0062 | 0.0139 | 0.0004 | 0.0004 | 0.0042 | 0.0193 | 0.0028 | 0.0242 | 0.0085 | 0.0648 | 0.012 |
Bud | 0.0011 | 0.0034 | 0.0008 | 0.0006 | 0 | 0.0001 | 0.0003 | 0.0002 | 0.0003 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.0001 | 0.0005 | 0.0004 | 0.0011 | 0.0001 |
Bud Neck | 0.0183 | 0.0005 | 0.0013 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0 | 0.0001 | 0.0002 | 0.0035 | 0.0001 | 0.0002 | 0.0019 | 0.0001 | 0.0001 |
Bud Periphery | 0.0025 | 0.0101 | 0.0019 | 0.0005 | 0.0003 | 0.0002 | 0.0012 | 0.0004 | 0.0004 | 0.0001 | 0.0007 | 0.0003 | 0.0005 | 0.0002 | 0.0009 | 0.0015 | 0.01 | 0.0002 |
Bud Site | 0.0225 | 0.0101 | 0.015 | 0.0012 | 0 | 0.0001 | 0.0006 | 0.0005 | 0.0017 | 0.0001 | 0 | 0.0003 | 0.0043 | 0.0002 | 0.0021 | 0.0012 | 0.0003 | 0.0001 |
Cell Periphery | 0.0041 | 0.0009 | 0.0055 | 0.0001 | 0.0002 | 0.0003 | 0.0003 | 0.0002 | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0019 | 0.0001 | 0.0002 | 0.0007 | 0.0001 | 0.0001 |
Cytoplasm | 0.0173 | 0.0007 | 0.0003 | 0.0004 | 0.0007 | 0 | 0 | 0.0001 | 0.0029 | 0 | 0.0001 | 0.0001 | 0.0064 | 0 | 0.0002 | 0.0001 | 0.0002 | 0 |
Cytoplasmic Foci | 0.05 | 0.0139 | 0.0074 | 0.0092 | 0.0162 | 0.001 | 0.0003 | 0.008 | 0.0155 | 0.0007 | 0.0057 | 0.0055 | 0.0464 | 0.0033 | 0.0165 | 0.0032 | 0.0148 | 0.0038 |
Eisosomes | 0.002 | 0.0005 | 0.0009 | 0.0001 | 0.0009 | 0.0002 | 0.0017 | 0.0003 | 0.0004 | 0.0001 | 0.0001 | 0.0002 | 0.0029 | 0.0002 | 0.0003 | 0.0003 | 0.0002 | 0.0002 |
Endoplasmic Reticulum | 0.0132 | 0.0003 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0028 | 0 | 0.0001 | 0.0001 | 0.0012 | 0 | 0.0001 | 0.0057 | 0.0001 | 0.0001 |
Endosome | 0.0452 | 0.0222 | 0.0145 | 0.0472 | 0.001 | 0.0045 | 0.0005 | 0.0086 | 0.022 | 0.0043 | 0.0411 | 0.0234 | 0.0659 | 0.0079 | 0.0398 | 0.0085 | 0.0131 | 0.0124 |
Golgi | 0.0338 | 0.0662 | 0.0229 | 0.0218 | 0.0019 | 0.0221 | 0.0008 | 0.0255 | 0.0097 | 0.0028 | 0.0702 | 0.0548 | 0.0482 | 0.0213 | 0.0268 | 0.0071 | 0.0523 | 0.0217 |
Lipid Particles | 0.0199 | 0.0356 | 0.0183 | 0.0044 | 0.012 | 0.009 | 0.0048 | 0.024 | 0.0444 | 0.0002 | 0.0242 | 0.0162 | 0.059 | 0.0133 | 0.0085 | 0.0069 | 0.0036 | 0.0139 |
Mitochondria | 0.5357 | 0.7468 | 0.8699 | 0.8745 | 0.8972 | 0.9514 | 0.9658 | 0.8859 | 0.8636 | 0.9861 | 0.8522 | 0.8643 | 0.6118 | 0.9052 | 0.8499 | 0.8349 | 0.8218 | 0.9134 |
None | 0.0572 | 0.0004 | 0.0002 | 0 | 0.0341 | 0 | 0.0003 | 0.0001 | 0.001 | 0 | 0 | 0.0001 | 0.0635 | 0 | 0.0001 | 0.0003 | 0.0002 | 0 |
Nuclear Periphery | 0.0312 | 0.0006 | 0.0003 | 0.0001 | 0.0004 | 0 | 0.0001 | 0.0001 | 0.0014 | 0 | 0.0001 | 0.0001 | 0.0006 | 0 | 0.0001 | 0.0147 | 0 | 0 |
Nucleolus | 0.0015 | 0.0004 | 0.0003 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0003 | 0.0004 | 0 | 0 | 0.0001 | 0.0017 | 0 | 0.0001 | 0.0005 | 0 | 0.0001 |
Nucleus | 0.0053 | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0005 | 0 | 0 | 0.0001 | 0.0008 | 0 | 0.0001 | 0.0005 | 0 | 0 |
Peroxisomes | 0.0733 | 0.0627 | 0.0243 | 0.0109 | 0.0185 | 0.006 | 0.0128 | 0.0363 | 0.0075 | 0.0038 | 0.0026 | 0.0273 | 0.0516 | 0.0429 | 0.0267 | 0.0785 | 0.017 | 0.0193 |
Punctate Nuclear | 0.0254 | 0.0001 | 0.0001 | 0 | 0.0065 | 0 | 0 | 0 | 0.0078 | 0 | 0 | 0 | 0.005 | 0 | 0.0007 | 0 | 0.0001 | 0 |
Vacuole | 0.0053 | 0.005 | 0.0025 | 0.0079 | 0.0002 | 0.0005 | 0.0006 | 0.0011 | 0.0027 | 0.0006 | 0.0008 | 0.0008 | 0.0032 | 0.0007 | 0.0009 | 0.0077 | 0.0001 | 0.0008 |
Vacuole Periphery | 0.0056 | 0.009 | 0.003 | 0.003 | 0.0007 | 0.0013 | 0.0009 | 0.0017 | 0.0008 | 0.0006 | 0.0013 | 0.0017 | 0.0016 | 0.0016 | 0.001 | 0.0168 | 0.0002 | 0.0016 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 19.8324 | 20.6301 | 27.2681 | 26.1434 | 21.0384 | 23.065 | 20.6961 | 24.4173 | 27.7878 | 25.152 |
Translational Efficiency | 0.5589 | 0.5177 | 0.5033 | 0.6318 | 0.5976 | 0.5872 | 0.6584 | 0.6895 | 0.5917 | 0.5245 |
Dataset | Hit |
---|---|
Protein Concentration | – |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|