Standard name | |
---|---|
Human Ortholog | |
Description | Subunit of a TORC1-stimulating GTPase and the EGO/GSE complex; subunit of Gtr1-Gtr2, a GTPase that activates TORC1 in response to amino acid stimulation; negatively regulates the GTPase cycle of Gtr1p, a Ran/TC4 homolog; subunit of EGO, a vacuolar/endosomal membrane complex that regulates exit from rapamycin-induced growth arrest and endosome to plasma membrane sorting of Gap1p; activates transcription when chromatin bound; activated by the Lst4p-Lst7p GAP complex; homolog of human RagC |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | – | – | 0 | 0 | 0 | – | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 |
Bud | 1 | 0 | – | – | 0 | 0 | 0 | – | – | – | – | – | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 3 | 5 |
Bud Neck | 0 | 0 | – | – | 0 | 0 | 0 | – | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | – | – | 0 | 0 | 0 | – | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | – | – | 0 | 1 | 0 | – | – | – | – | – | 0 | 1 | 0 | 4 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 3 | 19 | – | – | 5 | 2 | 2 | – | – | – | – | – | 15 | 19 | 21 | 18 | 14 | 22 | 0 | 0 | 0 | 2 | 1 | 0 |
Endoplasmic Reticulum | 0 | 1 | – | – | 0 | 2 | 0 | – | – | – | – | – | 1 | 0 | 3 | 16 | 6 | 19 | 0 | 2 | 0 | 1 | 1 | 1 |
Endosome | 0 | 1 | – | – | 1 | 2 | 0 | – | – | – | – | – | 15 | 5 | 12 | 2 | 0 | 7 | 7 | 3 | 0 | 18 | 17 | 31 |
Golgi | 0 | 2 | – | – | 1 | 2 | 0 | – | – | – | – | – | 2 | 5 | 8 | 24 | 13 | 23 | 1 | 1 | 0 | 1 | 2 | 3 |
Mitochondria | 32 | 5 | – | – | 0 | 10 | 5 | – | – | – | – | – | 6 | 1 | 1 | 10 | 4 | 17 | 3 | 3 | 0 | 7 | 2 | 5 |
Nucleus | 14 | 17 | – | – | 0 | 1 | 0 | – | – | – | – | – | 28 | 10 | 17 | 18 | 5 | 17 | 2 | 10 | 1 | 8 | 11 | 16 |
Nuclear Periphery | 34 | 43 | – | – | 1 | 4 | 3 | – | – | – | – | – | 37 | 95 | 90 | 80 | 23 | 100 | 13 | 13 | 2 | 44 | 53 | 53 |
Nucleolus | 17 | 2 | – | – | 0 | 1 | 0 | – | – | – | – | – | 9 | 1 | 3 | 10 | 3 | 12 | 1 | 1 | 0 | 2 | 4 | 6 |
Peroxisomes | 0 | 0 | – | – | 0 | 0 | 0 | – | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | – | – | 1 | 1 | 0 | – | – | – | – | – | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 |
Vac/Vac Membrane | 125 | 255 | – | – | 12 | 23 | 9 | – | – | – | – | – | 394 | 462 | 464 | 296 | 132 | 319 | 143 | 264 | 8 | 399 | 336 | 447 |
Unique Cell Count | 168 | 297 | 18 | 35 | 16 | 442 | 502 | 515 | 345 | 157 | 380 | 174 | 309 | 15 | 490 | 442 | 582 | |||||||
Labelled Cell Count | 226 | 345 | 21 | 49 | 19 | 507 | 599 | 621 | 478 | 201 | 538 | 174 | 309 | 15 | 490 | 442 | 582 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.8 | 11.0 | – | – | 9.6 | 7.9 | 7.5 | – | – | – | – | – | 10.1 | 10.9 | 11.0 | 14.3 | 13.9 | 14.0 | 10.5 | 10.6 | 11.1 |
Std Deviation (1e-4) | 1.4 | 2.7 | – | – | 1.6 | 1.7 | 2.3 | – | – | – | – | – | 2.2 | 2.1 | 1.9 | 4.0 | 3.8 | 3.6 | 2.2 | 2.2 | 2.6 |
Intensity Change (Log2) | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.2254 | 4.7414 | 4.2629 | 4.016 | 4.0073 | 4.1095 | 4.467 | 4.7918 | 4.4167 | 4.3206 | 4.2179 | 4.5942 | 5.2192 | 5.8983 | 5.6074 | 5.3327 | 4.716 | 5.893 |
Actin | 0.0102 | 0 | 0.0009 | 0 | 0.0047 | 0 | 0.0176 | 0.0011 | 0.0037 | 0.0037 | 0 | 0.0044 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0.0002 | 0.0008 | 0.0104 | 0.0002 | 0.0054 | 0.0029 | 0.0004 | 0.0027 | 0.0025 | 0.0004 | 0 | 0.0005 | 0.0001 | 0.0005 | 0.0005 | 0.0001 | 0.0001 | 0.0003 |
Bud Neck | 0.0004 | 0.0002 | 0.0004 | 0.0001 | 0.0005 | 0.0004 | 0.0029 | 0.0004 | 0.0009 | 0.0006 | 0 | 0.0011 | 0.0001 | 0.0002 | 0.0003 | 0 | 0.0001 | 0.0001 |
Bud Periphery | 0.0004 | 0.0009 | 0.003 | 0.0002 | 0.0017 | 0.0018 | 0.0006 | 0.0035 | 0.0025 | 0.0007 | 0.0001 | 0.0011 | 0.0002 | 0.0008 | 0.0011 | 0.0005 | 0.0002 | 0.0006 |
Bud Site | 0.0004 | 0.0014 | 0.0054 | 0.0001 | 0.0014 | 0.0008 | 0.0033 | 0.0065 | 0.0044 | 0.0024 | 0 | 0.0021 | 0.0001 | 0.001 | 0.0049 | 0 | 0.0001 | 0.0002 |
Cell Periphery | 0.0005 | 0.0007 | 0.001 | 0.0003 | 0.0008 | 0.0005 | 0.0007 | 0.001 | 0.0011 | 0.0005 | 0.0001 | 0.0004 | 0.0004 | 0.0007 | 0.0006 | 0.0002 | 0.0002 | 0.0004 |
Cytoplasm | 0.0077 | 0.0075 | 0.0129 | 0.0024 | 0.0037 | 0.0038 | 0.0132 | 0.0087 | 0.0052 | 0.0038 | 0.0003 | 0.007 | 0.0032 | 0.0026 | 0.0016 | 0.0005 | 0.0007 | 0.0017 |
Cytoplasmic Foci | 0.0065 | 0.0029 | 0.0035 | 0.0003 | 0.009 | 0.0214 | 0.0211 | 0.0054 | 0.0045 | 0.024 | 0.0002 | 0.0066 | 0.0026 | 0.0008 | 0.0004 | 0.0002 | 0.0012 | 0.0013 |
Eisosomes | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0002 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0039 | 0.001 | 0.0021 | 0.0002 | 0.0026 | 0.0009 | 0.0045 | 0.001 | 0.0018 | 0.0059 | 0.0003 | 0.0022 | 0.0009 | 0.0006 | 0.0029 | 0.0019 | 0.0006 | 0.0007 |
Endosome | 0.073 | 0.0359 | 0.069 | 0.0327 | 0.034 | 0.0602 | 0.1026 | 0.0441 | 0.0741 | 0.071 | 0.044 | 0.0815 | 0.0413 | 0.027 | 0.0392 | 0.0257 | 0.0239 | 0.0283 |
Golgi | 0.003 | 0.0011 | 0.0023 | 0.0001 | 0.003 | 0.0012 | 0.0075 | 0.0014 | 0.0101 | 0.009 | 0.0004 | 0.0051 | 0.0007 | 0.0004 | 0.0007 | 0.0003 | 0.0003 | 0.0006 |
Lipid Particles | 0.0046 | 0.0007 | 0.002 | 0.0001 | 0.0069 | 0.0025 | 0.0249 | 0.002 | 0.0037 | 0.0314 | 0.0001 | 0.0055 | 0.0013 | 0.0003 | 0.0004 | 0.0001 | 0.0008 | 0.0006 |
Mitochondria | 0.006 | 0.0044 | 0.0303 | 0.0001 | 0.0057 | 0.0057 | 0.0079 | 0.003 | 0.0231 | 0.0044 | 0.0002 | 0.0143 | 0.0016 | 0.0014 | 0.0114 | 0.0013 | 0.0013 | 0.0034 |
None | 0.0031 | 0.0002 | 0.0058 | 0 | 0.0046 | 0.0009 | 0.004 | 0.0017 | 0.0004 | 0.002 | 0 | 0.0009 | 0.0041 | 0.0001 | 0 | 0 | 0.0001 | 0.0001 |
Nuclear Periphery | 0.0203 | 0.0118 | 0.0164 | 0.001 | 0.0823 | 0.0368 | 0.0271 | 0.0096 | 0.0137 | 0.0113 | 0.0029 | 0.0226 | 0.0141 | 0.0076 | 0.0102 | 0.0103 | 0.0224 | 0.0212 |
Nucleolus | 0.0021 | 0.0042 | 0.0017 | 0.0002 | 0.0082 | 0.0086 | 0.0027 | 0.0142 | 0.0115 | 0.002 | 0.0001 | 0.0017 | 0.001 | 0.0013 | 0.0031 | 0.0001 | 0.0005 | 0.0008 |
Nucleus | 0.0243 | 0.0095 | 0.0052 | 0.0012 | 0.0073 | 0.0082 | 0.0256 | 0.0067 | 0.0053 | 0.003 | 0.0004 | 0.0028 | 0.0084 | 0.0048 | 0.0023 | 0.0006 | 0.0011 | 0.0062 |
Peroxisomes | 0.0018 | 0.0003 | 0.0005 | 0 | 0.0016 | 0.0003 | 0.0123 | 0.001 | 0.001 | 0.0037 | 0 | 0.0011 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0003 |
Punctate Nuclear | 0.0026 | 0.0001 | 0.0027 | 0 | 0.0046 | 0.0003 | 0.0096 | 0.0018 | 0.0003 | 0.0079 | 0 | 0.0034 | 0.0011 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0.3921 | 0.4663 | 0.3544 | 0.5448 | 0.2702 | 0.2942 | 0.3478 | 0.4046 | 0.3712 | 0.3573 | 0.3449 | 0.2578 | 0.3681 | 0.4174 | 0.4003 | 0.3408 | 0.226 | 0.2844 |
Vacuole Periphery | 0.4368 | 0.4502 | 0.47 | 0.416 | 0.5415 | 0.5484 | 0.3635 | 0.4794 | 0.4586 | 0.4548 | 0.6057 | 0.578 | 0.5506 | 0.5324 | 0.5198 | 0.6175 | 0.7205 | 0.6489 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 7.5281 | 4.8069 | 12.1276 | 18.3093 | 13.9436 | 11.8233 | 17.2539 | 19.354 | 20.3765 | 20.3546 |
Translational Efficiency | 3.0865 | 5.3435 | 1.8837 | 1.3866 | 1.4859 | 2.0606 | 1.6965 | 1.1791 | 1.155 | 1.2713 |
Dataset | Hit |
---|---|
Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✔ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|