Standard name | |
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Human Ortholog | |
Description | Mitochondrial methionyl-tRNA synthetase (MetRS); functions as a monomer in mitochondrial protein synthesis; functions similarly to cytoplasmic MetRS although the cytoplasmic form contains a zinc-binding domain not found in Msm1p |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 4 | 9 | 4 | 2 | 2 | 0 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | 3 | 1 | 3 | 3 | 5 | 0 | 16 | 4 | 0 | 5 | 8 |
Bud | 9 | 15 | 3 | 7 | 5 | 11 | 9 | 21 | 11 | 11 | 16 | 14 | 2 | 8 | 2 | 4 | 5 | 15 | 0 | 3 | 0 | 0 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 4 | 1 | 0 | 0 | 0 |
Bud Site | 2 | 0 | 1 | 0 | 2 | 0 | 3 | 4 | 4 | 1 | 5 | 4 | 0 | 1 | 0 | 1 | 1 | 4 | – | – | – | – | – | – |
Cell Periphery | 7 | 28 | 11 | 6 | 8 | 1 | 2 | 4 | 5 | 7 | 6 | 6 | 9 | 7 | 8 | 21 | 16 | 22 | 0 | 1 | 0 | 0 | 0 | 0 |
Cytoplasm | 8 | 15 | 13 | 13 | 32 | 11 | 23 | 35 | 18 | 20 | 12 | 13 | 25 | 41 | 65 | 19 | 28 | 27 | 0 | 2 | 0 | 0 | 1 | 1 |
Endoplasmic Reticulum | 2 | 5 | 2 | 4 | 1 | 10 | 2 | 6 | 3 | 3 | 5 | 3 | 1 | 2 | 9 | 6 | 10 | 10 | 0 | 1 | 1 | 0 | 1 | 1 |
Endosome | 7 | 57 | 30 | 34 | 42 | 25 | 32 | 29 | 11 | 16 | 5 | 15 | 40 | 75 | 52 | 40 | 71 | 62 | 20 | 60 | 28 | 9 | 15 | 14 |
Golgi | 0 | 13 | 29 | 6 | 17 | 2 | 1 | 2 | 2 | 1 | 1 | 0 | 13 | 8 | 11 | 27 | 17 | 19 | 11 | 39 | 8 | 7 | 8 | 10 |
Mitochondria | 260 | 308 | 119 | 211 | 157 | 304 | 322 | 427 | 410 | 388 | 470 | 382 | 114 | 108 | 67 | 43 | 43 | 47 | 226 | 351 | 268 | 94 | 136 | 142 |
Nucleus | 2 | 4 | 5 | 1 | 4 | 16 | 12 | 29 | 17 | 12 | 6 | 16 | 2 | 2 | 1 | 10 | 15 | 5 | 1 | 3 | 0 | 0 | 1 | 1 |
Nuclear Periphery | 5 | 2 | 1 | 2 | 1 | 8 | 13 | 11 | 10 | 13 | 16 | 14 | 0 | 0 | 0 | 4 | 0 | 1 | 2 | 2 | 2 | 0 | 0 | 1 |
Nucleolus | 3 | 3 | 2 | 0 | 2 | 5 | 11 | 11 | 3 | 4 | 11 | 6 | 2 | 0 | 0 | 1 | 11 | 1 | 1 | 1 | 1 | 0 | 0 | 0 |
Peroxisomes | 7 | 57 | 20 | 31 | 9 | 5 | 20 | 8 | 9 | 10 | 6 | 6 | 47 | 92 | 50 | 30 | 37 | 46 | 23 | 19 | 19 | 5 | 4 | 21 |
SpindlePole | 11 | 33 | 46 | 13 | 34 | 23 | 47 | 57 | 24 | 30 | 25 | 28 | 17 | 20 | 27 | 59 | 92 | 92 | 3 | 6 | 4 | 2 | 0 | 1 |
Vac/Vac Membrane | 28 | 101 | 60 | 22 | 46 | 35 | 40 | 39 | 35 | 34 | 22 | 25 | 34 | 31 | 33 | 41 | 58 | 76 | 5 | 21 | 10 | 5 | 13 | 6 |
Unique Cell Count | 281 | 470 | 245 | 282 | 296 | 377 | 432 | 560 | 461 | 459 | 505 | 434 | 224 | 293 | 269 | 232 | 307 | 314 | 302 | 541 | 355 | 127 | 192 | 218 |
Labelled Cell Count | 355 | 650 | 346 | 352 | 362 | 456 | 538 | 686 | 564 | 553 | 607 | 532 | 306 | 398 | 326 | 310 | 408 | 432 | 302 | 541 | 355 | 127 | 192 | 218 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.4 | 6.0 | 6.3 | 6.0 | 6.5 | 5.4 | 5.6 | 5.5 | 4.8 | 5.1 | 4.4 | 4.7 | 6.7 | 6.6 | 6.4 | 6.9 | 7.0 | 6.8 | 6.4 | 6.9 | 7.1 |
Std Deviation (1e-4) | 0.5 | 1.2 | 0.9 | 1.2 | 1.5 | 1.2 | 1.2 | 1.2 | 1.2 | 1.0 | 0.9 | 1.1 | 1.2 | 1.5 | 1.1 | 1.5 | 1.4 | 1.5 | 1.1 | 1.3 | 1.2 |
Intensity Change (Log2) | – | – | – | -0.06 | 0.05 | -0.22 | -0.18 | -0.19 | -0.38 | -0.31 | -0.51 | -0.41 | 0.09 | 0.08 | 0.02 | 0.13 | 0.15 | 0.12 | 0.03 | 0.13 | 0.18 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 1.4 | 0 | 1.9 | 0 | 0 | 0 | 0 | 0 | 1.2 | 0 | 0 | 0 | 2.4 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -1.5 | -1.1 | 0 | 0 | 0 | 0 | -2.4 | 0 | 0 | -0.3 | -1.3 | -0.9 | 2.0 | 0.4 | 1.3 |
Cytoplasm | -0.4 | 2.3 | -1.5 | 0 | 0.5 | -0.9 | -0.6 | -2.1 | -1.5 | 2.3 | 3.3 | 6.0 | 1.3 | 1.7 | 1.5 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.0 | 0 | 2.0 | 1.9 |
Endosome | -0.1 | 0.7 | -2.4 | -2.1 | -3.5 | 0 | -4.5 | 0 | 0 | 1.7 | 3.9 | 2.2 | 1.5 | 3.3 | 2.4 |
Golgi | -4.5 | -2.5 | -6.3 | -7.1 | -7.8 | 0 | -7.3 | 0 | 0 | -2.3 | -4.2 | -3.3 | -0.1 | -2.7 | -2.4 |
Mitochondria | 6.2 | 1.0 | 8.4 | 6.8 | 7.7 | 0 | 10.1 | 0 | 0 | 0.5 | -2.7 | -5.6 | -6.9 | -8.9 | -8.6 |
Nucleus | 0 | 0 | 1.5 | 0.6 | 2.0 | 1.2 | 0.5 | 0 | 1.2 | 0 | 0 | 0 | 1.4 | 1.8 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 2.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.1 | 0 |
Peroxisomes | 1.1 | -2.6 | -4.2 | -1.9 | -4.8 | 0 | -3.7 | 0 | 0 | 4.0 | 6.6 | 3.4 | 1.7 | 1.5 | 2.4 |
SpindlePole | -5.1 | -2.4 | -4.9 | -2.9 | -3.4 | 0 | -5.0 | 0 | 0 | -3.5 | -4.2 | -2.8 | 1.8 | 3.0 | 2.9 |
Vacuole | -5.3 | -2.6 | -5.2 | -5.4 | -7.0 | -6.3 | -6.3 | -8.3 | -7.1 | -2.5 | -4.3 | -3.6 | -1.8 | -1.6 | -0.1 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 1.9165 | 2.0813 | 1.8411 | 1.8281 | 1.5752 | 1.8218 | 2.0432 | 1.4249 | 1.451 | 1.1775 | 1.4379 | 1.3031 | 2.5938 | 2.5582 | 1.7458 | 1.9069 | 1.3556 | 1.4585 |
Actin | 0.0092 | 0.0119 | 0.0107 | 0.0009 | 0.0028 | 0.0041 | 0.0181 | 0.0171 | 0.0253 | 0.0217 | 0.0017 | 0.0057 | 0.0501 | 0.0349 | 0.0364 | 0.0543 | 0.007 | 0.0202 |
Bud | 0.0007 | 0.0034 | 0.0015 | 0.0003 | 0.0004 | 0.0005 | 0.0015 | 0.001 | 0.0017 | 0.0005 | 0.0013 | 0.0002 | 0.0016 | 0.0016 | 0.0026 | 0.0038 | 0.0011 | 0.0006 |
Bud Neck | 0.0046 | 0.0006 | 0.0008 | 0.0002 | 0.0003 | 0.0015 | 0.0025 | 0.0007 | 0.0017 | 0.0004 | 0.0002 | 0.0005 | 0.0019 | 0.0012 | 0.0021 | 0.0022 | 0.0004 | 0.0012 |
Bud Periphery | 0.0025 | 0.0095 | 0.0033 | 0.0015 | 0.0016 | 0.0006 | 0.0033 | 0.0016 | 0.0038 | 0.0014 | 0.0038 | 0.0007 | 0.0028 | 0.0027 | 0.0041 | 0.0104 | 0.0026 | 0.0018 |
Bud Site | 0.0057 | 0.0144 | 0.0192 | 0.0003 | 0.0005 | 0.0003 | 0.0233 | 0.0099 | 0.0183 | 0.0007 | 0.0008 | 0.0003 | 0.015 | 0.0245 | 0.0141 | 0.024 | 0.0008 | 0.0011 |
Cell Periphery | 0.0005 | 0.0008 | 0.0007 | 0.0002 | 0.0002 | 0.0002 | 0.0012 | 0.0006 | 0.003 | 0.0003 | 0.0002 | 0.0003 | 0.0013 | 0.0013 | 0.0038 | 0.0083 | 0.0003 | 0.001 |
Cytoplasm | 0.001 | 0.0065 | 0.0008 | 0.0026 | 0.0032 | 0.0097 | 0.0143 | 0.013 | 0.0044 | 0.0003 | 0.0221 | 0.0012 | 0.007 | 0.0206 | 0.0287 | 0.0319 | 0.0011 | 0.0028 |
Cytoplasmic Foci | 0.0205 | 0.0327 | 0.0119 | 0.0184 | 0.0168 | 0.0179 | 0.0611 | 0.0392 | 0.0227 | 0.0034 | 0.0233 | 0.0214 | 0.0419 | 0.049 | 0.0453 | 0.037 | 0.0111 | 0.024 |
Eisosomes | 0.0003 | 0.0004 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0009 | 0.0006 | 0.0008 | 0.0004 | 0.0001 | 0.0002 | 0.001 | 0.0007 | 0.0005 | 0.0006 | 0.0002 | 0.0003 |
Endoplasmic Reticulum | 0.0009 | 0.0011 | 0.0009 | 0.002 | 0.0011 | 0.0021 | 0.0102 | 0.0017 | 0.0009 | 0.0013 | 0.0024 | 0.0013 | 0.0038 | 0.004 | 0.0055 | 0.0041 | 0.0005 | 0.0048 |
Endosome | 0.076 | 0.1099 | 0.0367 | 0.0395 | 0.0868 | 0.0408 | 0.0842 | 0.0979 | 0.0273 | 0.0242 | 0.0554 | 0.0581 | 0.0944 | 0.0929 | 0.0514 | 0.0279 | 0.0978 | 0.0401 |
Golgi | 0.0421 | 0.0673 | 0.0421 | 0.0422 | 0.0363 | 0.0332 | 0.0501 | 0.0605 | 0.0242 | 0.0228 | 0.059 | 0.0466 | 0.0579 | 0.0694 | 0.044 | 0.0221 | 0.0522 | 0.0559 |
Lipid Particles | 0.043 | 0.0247 | 0.0163 | 0.0198 | 0.0171 | 0.0243 | 0.0465 | 0.0147 | 0.0108 | 0.0249 | 0.0023 | 0.0138 | 0.0692 | 0.0157 | 0.0119 | 0.0056 | 0.0107 | 0.0264 |
Mitochondria | 0.7145 | 0.653 | 0.8151 | 0.8348 | 0.7402 | 0.8268 | 0.543 | 0.6901 | 0.8115 | 0.8764 | 0.7547 | 0.7836 | 0.5766 | 0.6228 | 0.6859 | 0.7304 | 0.7904 | 0.7651 |
None | 0.0087 | 0.0022 | 0.0006 | 0.0045 | 0.0073 | 0.0023 | 0.0514 | 0.0112 | 0.0035 | 0.0003 | 0.0086 | 0.0053 | 0.0199 | 0.0155 | 0.0152 | 0.0046 | 0.0002 | 0.0008 |
Nuclear Periphery | 0.0065 | 0.0013 | 0.0045 | 0.0005 | 0.0017 | 0.0007 | 0.0112 | 0.0011 | 0.0013 | 0.0006 | 0.0011 | 0.0066 | 0.0064 | 0.0008 | 0.009 | 0.0004 | 0.0004 | 0.0063 |
Nucleolus | 0.0029 | 0.0013 | 0.0006 | 0.0001 | 0.0003 | 0.0006 | 0.0051 | 0.0009 | 0.0008 | 0.0001 | 0.0006 | 0.0002 | 0.0021 | 0.0006 | 0.0014 | 0.0003 | 0.0003 | 0.0007 |
Nucleus | 0.0011 | 0.0055 | 0.0009 | 0.0002 | 0.0005 | 0.001 | 0.0096 | 0.0008 | 0.0007 | 0.0002 | 0.0032 | 0.0004 | 0.0014 | 0.0007 | 0.0021 | 0.0007 | 0.0003 | 0.0008 |
Peroxisomes | 0.0441 | 0.0352 | 0.0249 | 0.0266 | 0.0652 | 0.0239 | 0.0365 | 0.0279 | 0.0296 | 0.0123 | 0.0485 | 0.0439 | 0.0284 | 0.0233 | 0.0177 | 0.0241 | 0.0105 | 0.0355 |
Punctate Nuclear | 0.0004 | 0.0005 | 0.0005 | 0.0001 | 0.0005 | 0.0012 | 0.0092 | 0.0002 | 0.0003 | 0.0001 | 0.0077 | 0.0025 | 0.0055 | 0.0006 | 0.0049 | 0.0003 | 0.0001 | 0.0015 |
Vacuole | 0.0073 | 0.0107 | 0.004 | 0.0023 | 0.0083 | 0.0043 | 0.0103 | 0.0057 | 0.0044 | 0.0022 | 0.0018 | 0.0034 | 0.0063 | 0.0123 | 0.0072 | 0.0051 | 0.0066 | 0.0044 |
Vacuole Periphery | 0.0075 | 0.0072 | 0.0039 | 0.0026 | 0.0089 | 0.0038 | 0.0065 | 0.0034 | 0.0029 | 0.0052 | 0.0013 | 0.0038 | 0.0051 | 0.0048 | 0.0065 | 0.002 | 0.0051 | 0.0049 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 8.6203 | 7.4207 | 3.8122 | 8.892 | 5.3814 | 5.7437 | 11.2545 | 10.3228 | 9.1502 | 11.5084 |
Translational Efficiency | 0.3914 | 0.4443 | 0.9374 | 0.4644 | 0.6433 | 0.6654 | 0.4482 | 0.4701 | 0.453 | 0.4063 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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