Standard name | |
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Human Ortholog | |
Description | Protein that localizes to chromatin; has a role in regulation of histone gene expression; has a bromodomain-like region that interacts with the N-terminal tail of histone H3, and an ATPase domain; relocalizes to the cytosol in response to hypoxia; potentially phosphorylated by Cdc28p |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 1 |
Bud | 0 | 2 | 2 | 0 | 0 | 0 | 2 | 4 | 6 | 1 | 9 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 2 | 2 | 2 | 2 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 2 |
Bud Site | 0 | 0 | 1 | 4 | 3 | 12 | 10 | 7 | 15 | 16 | 7 | 23 | 0 | 1 | 5 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 9 | 6 | 10 | 7 | 21 | 15 | 20 | 22 | 14 | 14 | 5 | 3 | 40 | 69 | 65 | 14 | 21 | 16 | 1 | 2 | 0 | 2 | 0 | 1 |
Endoplasmic Reticulum | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 2 | 4 | 0 | 0 | 0 | 2 | 1 | 1 |
Endosome | 0 | 2 | 0 | 0 | 3 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 4 | 5 | 2 | 2 | 2 | 6 | 5 | 5 | 5 | 1 | 9 | 12 |
Golgi | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 2 | 2 | 3 | 1 | 5 | 6 |
Mitochondria | 1 | 75 | 118 | 111 | 63 | 219 | 233 | 233 | 287 | 257 | 187 | 223 | 4 | 5 | 24 | 1 | 3 | 16 | 3 | 4 | 3 | 1 | 5 | 9 |
Nucleus | 276 | 415 | 375 | 252 | 277 | 382 | 441 | 442 | 335 | 295 | 204 | 263 | 307 | 396 | 412 | 74 | 85 | 111 | 236 | 418 | 325 | 199 | 308 | 300 |
Nuclear Periphery | 3 | 8 | 3 | 2 | 5 | 5 | 12 | 10 | 8 | 16 | 10 | 7 | 6 | 4 | 8 | 1 | 1 | 0 | 2 | 1 | 1 | 2 | 1 | 1 |
Nucleolus | 62 | 44 | 41 | 30 | 34 | 56 | 99 | 92 | 96 | 108 | 78 | 111 | 35 | 41 | 47 | 1 | 4 | 10 | 90 | 56 | 70 | 36 | 112 | 116 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 8 | 7 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 9 | 3 | 13 | 0 | 6 | 6 | 4 | 7 | 0 | 3 | 2 | 4 | 3 | 7 | 14 | 3 | 2 | 4 | 8 | 6 | 8 | 3 | 7 | 12 |
Vac/Vac Membrane | 6 | 7 | 2 | 1 | 4 | 1 | 2 | 3 | 0 | 3 | 0 | 0 | 5 | 2 | 6 | 4 | 8 | 7 | 14 | 22 | 25 | 16 | 34 | 41 |
Unique Cell Count | 328 | 478 | 439 | 292 | 344 | 481 | 607 | 592 | 480 | 445 | 306 | 394 | 365 | 500 | 530 | 97 | 121 | 146 | 371 | 525 | 455 | 278 | 505 | 513 |
Labelled Cell Count | 369 | 564 | 568 | 408 | 417 | 697 | 829 | 824 | 761 | 713 | 503 | 636 | 407 | 538 | 597 | 105 | 128 | 174 | 371 | 525 | 455 | 278 | 505 | 513 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.8 | 5.6 | 4.7 | 4.6 | 5.0 | 4.2 | 4.3 | 4.4 | 3.9 | 3.9 | 3.8 | 3.9 | 6.8 | 6.5 | 5.8 | 8.2 | 9.2 | 8.0 | 6.9 | 6.9 | 7.4 |
Std Deviation (1e-4) | 1.2 | 1.0 | 0.8 | 1.1 | 1.5 | 1.1 | 1.4 | 1.3 | 1.1 | 1.4 | 0.9 | 1.0 | 1.6 | 1.7 | 1.5 | 2.2 | 2.7 | 2.4 | 1.9 | 1.5 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.02 | 0.11 | -0.13 | -0.13 | -0.07 | -0.26 | -0.25 | -0.29 | -0.27 | 0.54 | 0.49 | 0.32 | 0.82 | 0.98 | 0.78 | 0.57 | 0.57 | 0.67 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.1 | 2.7 | 0.8 | 1.0 | 1.3 | 0.6 | 0.8 | -0.6 | -1.8 | 5.1 | 6.3 | 5.8 | 0 | 6.4 | 4.4 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | -2.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -10.1 | -11.7 | -9.8 | -5.5 | -5.8 | -4.0 |
Nucleus | 0.3 | -1.8 | -2.4 | -4.9 | -4.2 | -5.6 | -6.6 | -6.1 | -6.4 | -0.5 | -2.5 | -3.0 | -2.2 | -3.9 | -2.6 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.1 | -0.6 | -0.3 | -2.8 | -2.2 | -0.9 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | -1.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -2.2 | -1.7 | -0.3 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | 0 | 0 | 0 | 0 | 0.0001 | 0 | – | – | – | – | – | – | 0.0064 | 0 | 0.0009 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0015 | 0.0008 | – | – | – | – | – | – | 0.0004 | 0.0001 | 0 | 0.0001 | 0.0006 | 0.0005 |
Bud Periphery | 0 | 0 | 0 | 0 | 0.0001 | 0 | – | – | – | – | – | – | 0.0001 | 0 | 0 | 0 | 0.0001 | 0.0001 |
Bud Site | 0 | 0 | 0 | 0 | 0.0001 | 0 | – | – | – | – | – | – | 0.0003 | 0 | 0 | 0 | 0.0001 | 0.0001 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.0001 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 |
Cytoplasmic Foci | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | 0.0003 | 0 | 0.0002 | 0 | 0 | 0 |
Eisosomes | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | 0.0002 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | 0.0002 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0.0001 | 0 | – | – | – | – | – | – | 0.0005 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | 0.0004 | 0 | 0.0001 | 0 | 0 | 0 |
Lipid Particles | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | – | – | – | – | – | – | 0.001 | 0 | 0.0007 | 0 | 0 | 0 |
Mitochondria | 0.0004 | 0 | 0.0001 | 0 | 0.0003 | 0 | – | – | – | – | – | – | 0.0003 | 0.0001 | 0.0003 | 0.0001 | 0.0002 | 0.0002 |
None | 0 | 0 | 0 | 0 | 0.0001 | 0 | – | – | – | – | – | – | 0.0004 | 0 | 0 | 0 | 0.0001 | 0 |
Nuclear Periphery | 0.0004 | 0.0021 | 0.0013 | 0.0005 | 0.0012 | 0.0004 | – | – | – | – | – | – | 0.0012 | 0.0009 | 0.0035 | 0.0009 | 0.0018 | 0.0004 |
Nucleolus | 0.0592 | 0.0455 | 0.0366 | 0.0234 | 0.1681 | 0.132 | – | – | – | – | – | – | 0.0514 | 0.05 | 0.0358 | 0.0301 | 0.2352 | 0.0969 |
Nucleus | 0.9376 | 0.9478 | 0.9591 | 0.9747 | 0.8221 | 0.8634 | – | – | – | – | – | – | 0.9344 | 0.9426 | 0.9474 | 0.9678 | 0.7197 | 0.8931 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | 0.0003 | 0 | 0.0069 | 0 | 0 | 0 |
Punctate Nuclear | 0.0019 | 0.0042 | 0.0025 | 0.0014 | 0.0058 | 0.0033 | – | – | – | – | – | – | 0.0019 | 0.0063 | 0.004 | 0.001 | 0.0419 | 0.0086 |
Vacuole | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | – | – | – | – | – | – | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 |
Vacuole Periphery | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | – | – | – | – | – | – | 0.0001 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 28.5179 | 20.9665 | 28.6409 | 34.3487 | 34.7286 | 36.7598 | 30.5942 | 33.9002 | 37.895 | 37.0821 |
Translational Efficiency | 0.6355 | 0.5678 | 0.5369 | 0.5695 | 0.5834 | 0.4993 | 0.4553 | 0.4827 | 0.4197 | 0.4756 |
Dataset | Hit |
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Protein Concentration | – |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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