Standard name | |
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Human Ortholog | |
Description | Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays reduced frequency of mitochondrial genome loss |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 2 | 2 | 3 | 1 | 1 | – | 5 | 6 | 7 | 6 | 12 | 29 |
Bud | 7 | 6 | 4 | 5 | 4 | 3 | 0 | 6 | 3 | 0 | 3 | 3 | 6 | 15 | 13 | 2 | 3 | – | 3 | 1 | 1 | 3 | 4 | 10 |
Bud Neck | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 1 | 0 | 1 | 0 | 3 |
Bud Site | 4 | 0 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 1 | 1 | 0 | 4 | 1 | – | – | – | – | – | – | – |
Cell Periphery | 7 | 2 | 1 | 0 | 0 | 2 | 1 | 0 | 1 | 0 | 1 | 0 | 6 | 1 | 6 | 5 | 2 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 1 | 2 | 1 | 1 | 8 | 7 | 7 | 10 | 6 | 6 | 8 | 7 | 6 | 9 | 4 | 3 | – | 1 | 0 | 0 | 0 | 1 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 0 | 1 | 3 | – | 0 | 0 | 1 | 0 | 0 | 0 |
Endosome | 11 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 10 | 16 | 10 | 4 | 8 | – | 13 | 8 | 6 | 5 | 15 | 22 |
Golgi | 0 | 4 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 3 | 6 | 8 | 1 | 18 | – | 7 | 12 | 3 | 14 | 33 | 31 |
Mitochondria | 211 | 102 | 65 | 59 | 86 | 157 | 186 | 165 | 143 | 210 | 139 | 240 | 334 | 353 | 377 | 6 | 7 | – | 191 | 89 | 67 | 144 | 200 | 199 |
Nucleus | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | – | 0 | 0 | 0 | 0 | 1 | 0 |
Nuclear Periphery | 11 | 0 | 2 | 0 | 2 | 2 | 7 | 8 | 7 | 4 | 5 | 3 | 2 | 2 | 2 | 2 | 1 | – | 1 | 0 | 0 | 1 | 3 | 2 |
Nucleolus | 33 | 5 | 5 | 3 | 6 | 27 | 34 | 39 | 18 | 47 | 17 | 40 | 11 | 15 | 14 | 6 | 9 | – | 0 | 1 | 1 | 1 | 6 | 2 |
Peroxisomes | 44 | 20 | 12 | 16 | 6 | 1 | 2 | 0 | 0 | 0 | 2 | 1 | 63 | 110 | 188 | 26 | 22 | – | 19 | 5 | 9 | 31 | 45 | 66 |
SpindlePole | 20 | 4 | 3 | 3 | 2 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 8 | 21 | 20 | 5 | 15 | – | 10 | 2 | 1 | 9 | 20 | 28 |
Vac/Vac Membrane | 13 | 13 | 2 | 1 | 2 | 6 | 5 | 7 | 2 | 6 | 1 | 4 | 21 | 17 | 22 | 5 | 8 | – | 1 | 5 | 1 | 6 | 8 | 6 |
Unique Cell Count | 269 | 129 | 79 | 71 | 96 | 174 | 204 | 190 | 161 | 225 | 153 | 252 | 395 | 469 | 552 | 62 | 78 | 270 | 136 | 104 | 231 | 362 | 410 | |
Labelled Cell Count | 364 | 162 | 99 | 90 | 111 | 209 | 248 | 236 | 185 | 275 | 179 | 300 | 474 | 568 | 672 | 74 | 101 | 270 | 136 | 104 | 231 | 362 | 410 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 9.5 | 12.9 | 10.0 | 10.4 | 22.0 | 26.4 | 27.1 | 28.3 | 25.4 | 28.1 | 24.4 | 26.0 | 16.6 | 17.4 | 18.4 | 15.6 | 20.1 | – | 11.0 | 11.2 | 12.3 |
Std Deviation (1e-4) | 2.6 | 4.4 | 3.5 | 3.1 | 8.1 | 10.3 | 11.1 | 10.9 | 9.9 | 12.6 | 12.6 | 10.6 | 5.9 | 6.2 | 5.8 | 7.1 | 10.3 | – | 3.8 | 3.6 | 3.8 |
Intensity Change (Log2) | – | – | – | 0.06 | 1.14 | 1.4 | 1.44 | 1.5 | 1.35 | 1.49 | 1.29 | 1.38 | 0.73 | 0.8 | 0.88 | 0.65 | 1.01 | – | 0.13 | 0.17 | 0.3 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4.5 | – |
Mitochondria | 0.1 | 1.4 | 1.8 | 2.1 | 1.0 | 1.4 | 2.9 | 1.9 | 3.7 | 0.5 | -1.4 | -2.5 | -8.6 | -9.2 | – |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Nucleolus | 0 | 0 | 2.0 | 2.3 | 2.9 | 1.2 | 3.0 | 1.2 | 2.2 | 0 | 0 | 0 | 0 | 1.1 | – |
Peroxisomes | 1.2 | -1.9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.2 | 1.6 | 3.4 | 3.6 | 2.0 | – |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.0 | – |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 16.703 | 19.0537 | 16.8669 | 16.3009 | 15.421 | 18.6784 | 20.246 | 22.6057 | 21.0018 | 18.6216 | 19.7244 | 23.4096 | 27.2899 | 31.4625 | 30.8792 | 29.2855 | 25.4582 | 29.5094 |
Actin | 0.0206 | 0.0021 | 0.0147 | 0.0021 | 0.007 | 0.0082 | 0.0195 | 0.0025 | 0.0007 | 0 | 0.0022 | 0.0002 | 0.0093 | 0.0018 | 0.0018 | 0.0019 | 0 | 0.0015 |
Bud | 0.0002 | 0.0001 | 0.0003 | 0 | 0.0002 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0.0005 | 0 | 0.0001 |
Bud Neck | 0.0003 | 0.0001 | 0.0007 | 0 | 0.0003 | 0.0001 | 0.0003 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0001 |
Bud Periphery | 0.0004 | 0.0001 | 0.0003 | 0.0001 | 0.0005 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0.0003 | 0.001 | 0 | 0.0001 |
Bud Site | 0.0011 | 0.0009 | 0.0032 | 0 | 0.0009 | 0.0001 | 0.0009 | 0 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0.0002 | 0.0008 | 0 | 0 |
Cell Periphery | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0006 | 0.0004 | 0 | 0 |
Cytoplasm | 0.0024 | 0 | 0 | 0 | 0.0001 | 0 | 0.0013 | 0 | 0 | 0 | 0 | 0 | 0.0007 | 0 | 0 | 0 | 0 | 0.0008 |
Cytoplasmic Foci | 0.0146 | 0.0022 | 0.0029 | 0.0009 | 0.0111 | 0.0014 | 0.0133 | 0.0002 | 0.0042 | 0 | 0.0008 | 0 | 0.0058 | 0.0001 | 0.0002 | 0.0009 | 0 | 0.0004 |
Eisosomes | 0.0006 | 0.0002 | 0.0002 | 0.0001 | 0.0003 | 0.0012 | 0.0004 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0.0007 | 0.0004 | 0.0002 | 0 | 0.0002 |
Endoplasmic Reticulum | 0.002 | 0 | 0.0001 | 0 | 0.0009 | 0.0001 | 0.0004 | 0 | 0 | 0 | 0 | 0 | 0.0007 | 0 | 0 | 0 | 0 | 0.0006 |
Endosome | 0.0135 | 0.0032 | 0.0035 | 0.0046 | 0.0106 | 0.0019 | 0.01 | 0.0017 | 0.0004 | 0 | 0.0009 | 0.0004 | 0.0062 | 0.0001 | 0.0002 | 0.0009 | 0 | 0.0032 |
Golgi | 0.0095 | 0.0097 | 0.0096 | 0.0358 | 0.0064 | 0.0083 | 0.0039 | 0.0016 | 0.0007 | 0.0001 | 0.0069 | 0.0003 | 0.0022 | 0.0011 | 0.0005 | 0.0007 | 0 | 0.0061 |
Lipid Particles | 0.05 | 0.0143 | 0.0034 | 0.0079 | 0.0156 | 0.0088 | 0.027 | 0.007 | 0.0025 | 0.0001 | 0.0021 | 0.0006 | 0.007 | 0.0017 | 0.0018 | 0.0052 | 0.0001 | 0.0064 |
Mitochondria | 0.8379 | 0.9471 | 0.9461 | 0.9411 | 0.9032 | 0.9535 | 0.8838 | 0.9776 | 0.9773 | 0.9992 | 0.9801 | 0.9907 | 0.9532 | 0.9914 | 0.9587 | 0.9606 | 0.9996 | 0.9616 |
None | 0.0032 | 0 | 0 | 0 | 0.0003 | 0 | 0.0022 | 0 | 0 | 0 | 0 | 0 | 0.0015 | 0 | 0 | 0 | 0 | 0.0002 |
Nuclear Periphery | 0.004 | 0 | 0.0001 | 0 | 0.0029 | 0.0001 | 0.001 | 0 | 0 | 0 | 0 | 0.0001 | 0.0032 | 0 | 0 | 0.0001 | 0 | 0.008 |
Nucleolus | 0.007 | 0.0002 | 0.0001 | 0 | 0.0004 | 0.0002 | 0.0007 | 0.0001 | 0.0003 | 0 | 0 | 0 | 0.0001 | 0 | 0.0098 | 0.0006 | 0 | 0.0002 |
Nucleus | 0.0046 | 0.0001 | 0 | 0 | 0.0007 | 0 | 0.0003 | 0 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 | 0.0011 | 0.0002 | 0 | 0.004 |
Peroxisomes | 0.0134 | 0.0093 | 0.0049 | 0.0028 | 0.0356 | 0.0036 | 0.0116 | 0.0018 | 0.0046 | 0.0002 | 0.0064 | 0.0004 | 0.0031 | 0.0016 | 0.003 | 0.0086 | 0 | 0.0005 |
Punctate Nuclear | 0.0058 | 0 | 0 | 0 | 0.001 | 0 | 0.0064 | 0 | 0.0001 | 0 | 0 | 0 | 0.005 | 0 | 0 | 0 | 0 | 0.0006 |
Vacuole | 0.0014 | 0.0019 | 0.0012 | 0.0005 | 0.0009 | 0.001 | 0.005 | 0.0014 | 0.0028 | 0 | 0 | 0.0012 | 0.0002 | 0.0001 | 0.0069 | 0.0048 | 0 | 0.0006 |
Vacuole Periphery | 0.0073 | 0.0084 | 0.0085 | 0.0038 | 0.0013 | 0.0112 | 0.0116 | 0.0057 | 0.0058 | 0.0002 | 0.0002 | 0.0058 | 0.001 | 0.0012 | 0.0143 | 0.0126 | 0.0002 | 0.0047 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 24.8621 | 13.4057 | 20.4188 | 56.621 | 26.0949 | 48.119 | 35.313 | 63.3163 | 72.6359 | 33.4435 |
Translational Efficiency | 1.4401 | 1.7942 | 1.7326 | 1.3178 | 1.1218 | 1.9961 | 1.8416 | 1.8752 | 2.0659 | 1.8434 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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