Standard name | |
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Human Ortholog | |
Description | Non-ATPase base subunit of the 19S RP of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein-protein interactions; RP is the acronym for regulatory particle |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 1 | 2 | 1 | 7 | 7 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 3 | 3 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 3 | 4 | 6 | 12 | 20 | 21 | 14 | 16 | 15 | 12 | 9 | 4 | 13 | 13 | 30 | 7 | 8 | 7 | 1 | 0 | 0 | 0 | 1 | 2 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 5 |
Golgi | 0 | 0 | 1 | 2 | 6 | 2 | 2 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 3 | 0 | 2 |
Mitochondria | 0 | 3 | 2 | 0 | 2 | 2 | 4 | 13 | 22 | 25 | 30 | 18 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 2 | 0 | 2 | 2 |
Nucleus | 371 | 94 | 165 | 133 | 163 | 178 | 252 | 263 | 226 | 239 | 217 | 247 | 101 | 101 | 113 | 61 | 52 | 43 | 402 | 129 | 187 | 152 | 202 | 233 |
Nuclear Periphery | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 1 |
Nucleolus | 5 | 6 | 9 | 9 | 11 | 14 | 35 | 60 | 66 | 49 | 40 | 58 | 1 | 1 | 3 | 1 | 6 | 1 | 30 | 6 | 39 | 12 | 32 | 32 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 1 | 3 |
Vac/Vac Membrane | 42 | 17 | 26 | 48 | 109 | 114 | 89 | 111 | 61 | 68 | 38 | 54 | 18 | 24 | 35 | 12 | 23 | 13 | 15 | 8 | 17 | 19 | 35 | 81 |
Unique Cell Count | 411 | 116 | 208 | 199 | 287 | 319 | 385 | 440 | 369 | 373 | 307 | 363 | 130 | 132 | 177 | 78 | 88 | 64 | 462 | 152 | 261 | 195 | 290 | 379 |
Labelled Cell Count | 421 | 124 | 211 | 204 | 312 | 333 | 399 | 471 | 395 | 402 | 337 | 385 | 134 | 139 | 186 | 84 | 98 | 66 | 462 | 152 | 261 | 195 | 290 | 379 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 20.2 | 15.3 | 19.5 | 21.8 | 22.2 | 21.4 | 20.0 | 18.4 | 17.6 | 15.9 | 16.0 | 16.5 | 19.4 | 19.4 | 19.5 | 14.2 | 16.3 | 18.9 | 21.0 | 21.7 | 23.3 |
Std Deviation (1e-4) | 3.8 | 4.3 | 4.5 | 4.6 | 5.1 | 4.5 | 4.4 | 4.6 | 4.6 | 4.0 | 4.5 | 4.4 | 4.9 | 4.9 | 6.1 | 5.8 | 6.2 | 6.2 | 4.8 | 5.4 | 6.8 |
Intensity Change (Log2) | – | – | – | 0.16 | 0.19 | 0.13 | 0.03 | -0.08 | -0.15 | -0.3 | -0.28 | -0.24 | -0.01 | -0.01 | -0.0 | -0.46 | -0.26 | -0.05 | 0.11 | 0.16 | 0.25 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1.5 | 2.0 | 1.9 | 0.5 | 0.5 | 0.7 | 0.2 | 0 | 0 | 2.8 | 2.7 | 4.7 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 2.9 | 3.2 | 4.1 | 2.5 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | -2.8 | -5.2 | -5.5 | -3.5 | -4.9 | -4.5 | -3.8 | -2.2 | -2.9 | -0.4 | -0.6 | -3.4 | -0.2 | -3.6 | -2.0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0.1 | -0.3 | 0 | 2.1 | 3.6 | 4.7 | 3.4 | 3.3 | 4.2 | 0 | 0 | -1.5 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 3.0 | 6.3 | 5.9 | 3.1 | 3.7 | 1.3 | 1.8 | 0 | 0.8 | 0.4 | 1.4 | 1.9 | 0.6 | 2.9 | 1.6 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | 0.0352 | 0 | 0.0012 | 0.0007 | 0.0001 | 0.0119 | 0.0007 | 0 | 0.0044 | 0.0005 | 0.0142 | 0.0001 | – | – | – | – | – | – |
Bud | 0.0006 | 0 | 0.0001 | 0.0004 | 0.0002 | 0.0001 | 0.0006 | 0 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | – | – | – | – | – | – |
Bud Neck | 0.0009 | 0 | 0.0002 | 0.0003 | 0.0003 | 0.0007 | 0.0005 | 0 | 0 | 0.0002 | 0.0005 | 0.0006 | – | – | – | – | – | – |
Bud Periphery | 0.0007 | 0 | 0.0001 | 0.0005 | 0.0003 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0001 | 0.0003 | 0.0001 | – | – | – | – | – | – |
Bud Site | 0.002 | 0 | 0.0016 | 0.0009 | 0.0002 | 0.0001 | 0.0042 | 0 | 0.0002 | 0 | 0.0012 | 0 | – | – | – | – | – | – |
Cell Periphery | 0.0005 | 0 | 0.0001 | 0.0009 | 0.0012 | 0.0001 | 0.0002 | 0 | 0 | 0 | 0.0001 | 0.0001 | – | – | – | – | – | – |
Cytoplasm | 0.0112 | 0.0005 | 0.0019 | 0.0042 | 0.002 | 0.0014 | 0.0041 | 0.0005 | 0.0009 | 0.005 | 0.0039 | 0.0002 | – | – | – | – | – | – |
Cytoplasmic Foci | 0.0196 | 0 | 0.0098 | 0.0168 | 0.0055 | 0.0024 | 0.0151 | 0 | 0.0013 | 0 | 0.0029 | 0 | – | – | – | – | – | – |
Eisosomes | 0.0003 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | – | – | – | – | – | – |
Endoplasmic Reticulum | 0.0071 | 0 | 0.0004 | 0.0003 | 0.0007 | 0.001 | 0.0002 | 0 | 0.0006 | 0.0002 | 0.0047 | 0 | – | – | – | – | – | – |
Endosome | 0.0216 | 0 | 0.002 | 0.0028 | 0.0016 | 0.0052 | 0.0025 | 0 | 0.0061 | 0.0001 | 0.0238 | 0 | – | – | – | – | – | – |
Golgi | 0.0099 | 0 | 0.0017 | 0.003 | 0.0002 | 0.0019 | 0.0011 | 0 | 0.0029 | 0 | 0.0042 | 0 | – | – | – | – | – | – |
Lipid Particles | 0.018 | 0 | 0.0085 | 0.0551 | 0.01 | 0.0042 | 0.001 | 0 | 0.0003 | 0 | 0.0032 | 0 | – | – | – | – | – | – |
Mitochondria | 0.0051 | 0.0003 | 0.0039 | 0.0026 | 0.0083 | 0.0014 | 0.0024 | 0.0002 | 0.0029 | 0.0007 | 0.0029 | 0.0005 | – | – | – | – | – | – |
None | 0.0178 | 0 | 0.0018 | 0.0034 | 0.0009 | 0.0002 | 0.0011 | 0 | 0.0002 | 0 | 0.0055 | 0 | – | – | – | – | – | – |
Nuclear Periphery | 0.0262 | 0.0097 | 0.0131 | 0.0211 | 0.0369 | 0.027 | 0.0196 | 0.0109 | 0.0083 | 0.0327 | 0.0314 | 0.0084 | – | – | – | – | – | – |
Nucleolus | 0.0406 | 0.007 | 0.0083 | 0.0207 | 0.0482 | 0.0109 | 0.0244 | 0.0054 | 0.0055 | 0.0014 | 0.0253 | 0.0252 | – | – | – | – | – | – |
Nucleus | 0.7483 | 0.9819 | 0.9396 | 0.8397 | 0.8548 | 0.9235 | 0.8341 | 0.9827 | 0.9652 | 0.9578 | 0.8515 | 0.9634 | – | – | – | – | – | – |
Peroxisomes | 0.0049 | 0 | 0.0031 | 0.0217 | 0.0003 | 0.0036 | 0.001 | 0 | 0.0003 | 0 | 0.0009 | 0 | – | – | – | – | – | – |
Punctate Nuclear | 0.0196 | 0.0001 | 0.0012 | 0.0023 | 0.004 | 0.0007 | 0.0843 | 0.0001 | 0.0003 | 0.0003 | 0.0208 | 0.0002 | – | – | – | – | – | – |
Vacuole | 0.0051 | 0.0001 | 0.0005 | 0.0017 | 0.0075 | 0.0018 | 0.001 | 0 | 0.0001 | 0.0003 | 0.0008 | 0.0006 | – | – | – | – | – | – |
Vacuole Periphery | 0.0048 | 0.0002 | 0.0009 | 0.0007 | 0.0166 | 0.0018 | 0.0015 | 0.0001 | 0.0003 | 0.0005 | 0.0015 | 0.0004 | – | – | – | – | – | – |
R1 | R2 | |||||||||
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G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 180.0155 | 145.8725 | 175.2517 | 187.8738 | 155.4387 | 159.0212 | 165.2173 | 177.5365 | 198.0119 | 164.5973 |
Translational Efficiency | 1.4824 | 1.5551 | 1.2082 | 1.2662 | 1.2025 | 1.6003 | 1.3256 | 0.9939 | 0.9949 | 1.1584 |
Dataset | Hit |
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Protein Concentration | – |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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