Standard name | |
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Human Ortholog | |
Description | Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; msc7 mutants are defective in directing meiotic recombination events to homologous chromatids |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 12 | 10 | 11 | 23 | 12 | 26 | 56 | 27 | 52 | 21 | 47 | 16 | 18 | 14 | 8 | 10 | 5 | 1 | 4 | 4 | 3 | 11 | 11 |
Bud | 0 | 0 | 1 | 0 | 3 | 0 | 3 | 8 | 4 | 4 | 5 | 11 | 2 | 1 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 8 | 12 | 2 | 26 | 18 | 20 | 30 | 9 | 37 | 25 | 37 | 14 | 32 | 21 | 15 | 8 | 13 | 0 | 0 | 1 | 2 | 2 | 7 |
Cytoplasm | 7 | 26 | 18 | 24 | 40 | 31 | 54 | 42 | 42 | 37 | 38 | 52 | 15 | 51 | 27 | 31 | 66 | 31 | 1 | 7 | 2 | 4 | 13 | 4 |
Endoplasmic Reticulum | 125 | 190 | 313 | 177 | 258 | 388 | 334 | 586 | 336 | 358 | 231 | 245 | 198 | 317 | 238 | 4 | 13 | 0 | 143 | 221 | 336 | 265 | 445 | 417 |
Endosome | 0 | 0 | 1 | 0 | 3 | 2 | 6 | 5 | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 2 | 3 | 0 | 0 | 1 | 1 | 0 | 1 | 2 |
Golgi | 6 | 0 | 10 | 22 | 37 | 9 | 10 | 19 | 2 | 7 | 1 | 4 | 5 | 5 | 1 | 2 | 12 | 8 | 1 | 1 | 2 | 2 | 4 | 4 |
Mitochondria | 4 | 10 | 18 | 29 | 37 | 37 | 81 | 132 | 73 | 139 | 103 | 164 | 1 | 0 | 0 | 18 | 17 | 10 | 2 | 4 | 4 | 3 | 9 | 9 |
Nucleus | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 3 | 1 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 15 | 15 | 45 | 24 | 23 | 50 | 38 | 86 | 48 | 57 | 34 | 48 | 11 | 11 | 6 | 7 | 6 | 11 | 1 | 3 | 7 | 5 | 2 | 3 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 18 | 23 | 18 | 25 | 85 | 49 | 181 | 117 | 44 | 61 | 30 | 98 | 15 | 16 | 11 | 16 | 42 | 11 | 0 | 12 | 2 | 4 | 14 | 25 |
Unique Cell Count | 140 | 236 | 346 | 238 | 408 | 486 | 610 | 837 | 475 | 572 | 382 | 533 | 227 | 384 | 284 | 85 | 159 | 82 | 153 | 260 | 368 | 294 | 512 | 494 |
Labelled Cell Count | 179 | 285 | 447 | 315 | 536 | 598 | 754 | 1088 | 587 | 756 | 490 | 711 | 277 | 452 | 319 | 104 | 182 | 90 | 153 | 260 | 368 | 294 | 512 | 494 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 12.3 | 11.5 | 11.3 | 11.7 | 12.6 | 11.8 | 11.9 | 12.0 | 11.9 | 11.3 | 11.4 | 11.1 | 13.9 | 14.4 | 14.1 | 8.0 | 9.6 | 11.9 | 15.4 | 15.0 | 15.5 |
Std Deviation (1e-4) | 2.6 | 3.0 | 2.2 | 2.4 | 2.7 | 2.2 | 2.2 | 2.3 | 2.3 | 2.2 | 2.4 | 2.4 | 2.5 | 2.6 | 2.5 | 1.5 | 2.2 | 2.4 | 2.4 | 2.6 | 2.6 |
Intensity Change (Log2) | – | – | – | 0.04 | 0.15 | 0.06 | 0.08 | 0.08 | 0.07 | -0.01 | 0.01 | -0.02 | 0.29 | 0.35 | 0.31 | -0.51 | -0.24 | 0.07 | 0.44 | 0.41 | 0.45 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 1.1 | 1.8 | -0.4 | 1.1 | 2.6 | 1.9 | 3.6 | 1.7 | 3.5 | 2.3 | 1.3 | 1.3 | 0 | 1.8 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -2.0 | 1.8 | 0.2 | -0.2 | 0.1 | -1.4 | 2.0 | 1.9 | 2.2 | 1.5 | 2.8 | 2.2 | 4.8 | 0.8 | 0 |
Cytoplasm | 2.2 | 2.4 | 0.7 | 2.1 | -0.1 | 2.0 | 0.8 | 2.4 | 2.4 | 0.7 | 3.7 | 2.1 | 8.1 | 10.2 | 8.3 |
Endoplasmic Reticulum | -5.2 | -8.7 | -4.1 | -11.3 | -7.5 | -6.9 | -9.2 | -9.3 | -13.4 | -1.2 | -3.1 | -2.5 | -16.1 | -18.0 | -16.6 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 3.3 | 3.5 | -1.0 | -1.3 | -0.6 | -2.9 | -1.8 | -2.9 | -2.5 | -0.5 | -1.5 | 0 | 0 | 2.4 | 0 |
Mitochondria | 3.0 | 2.0 | 1.4 | 3.9 | 5.0 | 4.6 | 7.4 | 7.9 | 9.1 | -3.1 | -4.5 | -3.9 | 4.8 | 2.3 | 2.3 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | -1.1 | -3.5 | -1.2 | -3.6 | -1.4 | -1.3 | -1.4 | -1.8 | -1.9 | -3.2 | -5.1 | -5.0 | -1.2 | -3.2 | 0.1 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 2.4 | 6.2 | 2.5 | 9.0 | 4.3 | 2.2 | 2.9 | 1.4 | 5.6 | 0.7 | -0.7 | -0.8 | 4.2 | 6.8 | 2.7 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 6.9991 | 6.0085 | 6.5933 | 5.1328 | 6.2661 | 6.3397 | 5.2462 | 6.3767 | 5.376 | 5.2017 | 4.5525 | 5.4928 | 5.268 | 5.9007 | 4.9887 | 4.5925 | 4.1866 | 5.154 |
Actin | 0.0083 | 0.0057 | 0.0043 | 0.003 | 0.0056 | 0.0043 | 0.0128 | 0.0001 | 0.0053 | 0.001 | 0.0079 | 0.0013 | 0.0005 | 0.0257 | 0.0004 | 0.0095 | 0.0005 | 0.0018 |
Bud | 0.0002 | 0.0014 | 0.0029 | 0.0002 | 0.0099 | 0.0002 | 0.0003 | 0 | 0.0005 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0004 | 0 | 0.0001 | 0 | 0.0001 |
Bud Neck | 0.0003 | 0.0004 | 0.0008 | 0.0004 | 0.0004 | 0.0008 | 0.0013 | 0.0001 | 0.0037 | 0.0003 | 0.0005 | 0.0006 | 0.0001 | 0.0006 | 0.0001 | 0.0003 | 0.0004 | 0.0012 |
Bud Periphery | 0.0007 | 0.0033 | 0.0049 | 0.0002 | 0.0084 | 0.0004 | 0.0003 | 0 | 0.0023 | 0.0005 | 0.0003 | 0.0002 | 0 | 0.0009 | 0 | 0.0004 | 0.0001 | 0.0004 |
Bud Site | 0.0009 | 0.01 | 0.0054 | 0.0002 | 0.0006 | 0.0001 | 0.0025 | 0.0001 | 0.001 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0107 | 0.0001 | 0.0001 | 0 | 0.0003 |
Cell Periphery | 0.0007 | 0.0021 | 0.0013 | 0.0003 | 0.0005 | 0.0004 | 0.0007 | 0.0009 | 0.0029 | 0.0015 | 0.0009 | 0.0009 | 0.0007 | 0.0028 | 0.0005 | 0.0006 | 0.0004 | 0.001 |
Cytoplasm | 0.0446 | 0.1155 | 0.0622 | 0.054 | 0.026 | 0.0635 | 0.0433 | 0.0787 | 0.039 | 0.0737 | 0.0541 | 0.0651 | 0.0187 | 0.1098 | 0.0443 | 0.0564 | 0.0305 | 0.0827 |
Cytoplasmic Foci | 0.0077 | 0.007 | 0.0059 | 0.0101 | 0.0167 | 0.0035 | 0.004 | 0.0014 | 0.0025 | 0.0013 | 0.0026 | 0.0032 | 0.0125 | 0.0068 | 0.0028 | 0.0063 | 0.0012 | 0.0024 |
Eisosomes | 0.0004 | 0.0002 | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0005 | 0.0001 | 0.0003 | 0 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0 |
Endoplasmic Reticulum | 0.7993 | 0.6742 | 0.7967 | 0.7883 | 0.8011 | 0.7988 | 0.8147 | 0.8447 | 0.8412 | 0.8359 | 0.8451 | 0.8133 | 0.8574 | 0.7811 | 0.8718 | 0.8479 | 0.8865 | 0.8397 |
Endosome | 0.0187 | 0.0248 | 0.021 | 0.0275 | 0.0222 | 0.0157 | 0.0176 | 0.0022 | 0.0095 | 0.0054 | 0.0124 | 0.0173 | 0.014 | 0.0104 | 0.0081 | 0.0226 | 0.0058 | 0.0053 |
Golgi | 0.0032 | 0.003 | 0.0035 | 0.0048 | 0.0035 | 0.0023 | 0.0055 | 0.0003 | 0.0027 | 0.0009 | 0.0046 | 0.0012 | 0.0013 | 0.004 | 0.0012 | 0.004 | 0.0004 | 0.0004 |
Lipid Particles | 0.0085 | 0.0156 | 0.0086 | 0.035 | 0.0083 | 0.0027 | 0.0039 | 0.0016 | 0.0048 | 0.0011 | 0.0066 | 0.0046 | 0.0243 | 0.0075 | 0.0047 | 0.0117 | 0.0012 | 0.0034 |
Mitochondria | 0.0023 | 0.0027 | 0.0019 | 0.0008 | 0.0068 | 0.0017 | 0.0007 | 0 | 0.0105 | 0.0507 | 0.0006 | 0.0004 | 0.0003 | 0.0008 | 0.0003 | 0.0005 | 0.0001 | 0.0002 |
None | 0.0249 | 0.0475 | 0.024 | 0.0059 | 0.0074 | 0.0295 | 0.0426 | 0.0618 | 0.0453 | 0.0037 | 0.041 | 0.046 | 0.0204 | 0.0011 | 0.0496 | 0.022 | 0.0501 | 0.037 |
Nuclear Periphery | 0.0593 | 0.0566 | 0.0313 | 0.0513 | 0.0279 | 0.0572 | 0.0377 | 0.0052 | 0.0207 | 0.0146 | 0.0172 | 0.0355 | 0.041 | 0.0237 | 0.0121 | 0.0125 | 0.0167 | 0.0174 |
Nucleolus | 0.0002 | 0.0006 | 0.0004 | 0.0002 | 0.0006 | 0.0002 | 0.0003 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0.0003 | 0 | 0 | 0 | 0 |
Nucleus | 0.0065 | 0.0099 | 0.0077 | 0.0067 | 0.005 | 0.0102 | 0.0047 | 0.0004 | 0.0018 | 0.0021 | 0.0018 | 0.0034 | 0.0014 | 0.0043 | 0.0008 | 0.0008 | 0.0013 | 0.0025 |
Peroxisomes | 0.0021 | 0.0003 | 0.0027 | 0.0008 | 0.0142 | 0.0004 | 0.0006 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0 | 0 |
Punctate Nuclear | 0.0027 | 0.0023 | 0.0071 | 0.0042 | 0.0024 | 0.0014 | 0.0015 | 0.0002 | 0.0006 | 0.0002 | 0.0006 | 0.0006 | 0.0009 | 0.0009 | 0.0005 | 0.0007 | 0.0004 | 0.0003 |
Vacuole | 0.0066 | 0.0147 | 0.0057 | 0.0047 | 0.0263 | 0.0048 | 0.0038 | 0.002 | 0.0041 | 0.0053 | 0.0025 | 0.0052 | 0.0042 | 0.0069 | 0.0021 | 0.0026 | 0.0036 | 0.0033 |
Vacuole Periphery | 0.0019 | 0.0024 | 0.0015 | 0.0015 | 0.0061 | 0.0018 | 0.0011 | 0.0002 | 0.0009 | 0.0011 | 0.0006 | 0.0011 | 0.0019 | 0.0009 | 0.0005 | 0.0008 | 0.0008 | 0.0005 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 57.0235 | 46.3877 | 65.439 | 95.4682 | 86.1325 | 43.3139 | 51.6701 | 55.3112 | 74.4498 | 98.5287 |
Translational Efficiency | 0.725 | 0.8168 | 0.7347 | 0.5797 | 0.7199 | 0.8332 | 0.7573 | 0.5752 | 0.6512 | 0.5989 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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