Standard name | |
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Human Ortholog | |
Description | GPI-glycan remodelase; conserved phosphoesterase domain-containing protein; acts together with Emp24p/Erv25p in cargo exit from the ER; functional ortholog of mammalian GPI-glycan remodelase PGAP5; deletion confers sensitivity to 4-(N-(S-glutathionylacetyl)amino) phenylarsenoxide (GSAO) |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 4 | 4 | 5 | 0 | 1 | 2 | 6 | 9 | 9 |
Bud | 0 | 1 | 0 | 0 | 2 | 1 | 1 | 2 | 3 | 0 | 2 | 2 | 0 | 1 | 1 | 1 | 0 | 1 | 2 | 2 | 0 | 3 | 10 | 11 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 0 | 3 | 9 | 11 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 2 | 2 | 8 | 4 | 7 | 17 | 13 | 10 | 0 | 2 | 0 | 2 | 6 | 10 |
Cytoplasm | 41 | 90 | 18 | 35 | 32 | 68 | 60 | 116 | 61 | 47 | 48 | 29 | 290 | 354 | 354 | 128 | 71 | 56 | 45 | 80 | 21 | 145 | 241 | 204 |
Endoplasmic Reticulum | 1 | 10 | 0 | 3 | 2 | 5 | 4 | 2 | 6 | 1 | 1 | 0 | 22 | 10 | 14 | 8 | 7 | 10 | 17 | 22 | 7 | 48 | 33 | 25 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 6 | 5 | 1 | 2 | 1 | 0 | 0 | 4 | 2 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 |
Mitochondria | 11 | 2 | 3 | 7 | 10 | 49 | 49 | 85 | 71 | 31 | 85 | 45 | 2 | 3 | 1 | 12 | 11 | 8 | 15 | 11 | 11 | 15 | 21 | 21 |
Nucleus | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 1 | 1 | 1 | 1 | 0 | 2 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 2 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 0 |
Nucleolus | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 3 | 1 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 2 | 9 | 10 |
Vac/Vac Membrane | 5 | 3 | 0 | 1 | 2 | 1 | 3 | 4 | 4 | 2 | 2 | 2 | 6 | 1 | 7 | 37 | 42 | 10 | 4 | 6 | 0 | 2 | 5 | 17 |
Unique Cell Count | 53 | 107 | 18 | 43 | 39 | 112 | 93 | 178 | 115 | 74 | 111 | 65 | 322 | 367 | 382 | 195 | 144 | 91 | 95 | 140 | 49 | 240 | 363 | 344 |
Labelled Cell Count | 60 | 109 | 21 | 48 | 48 | 129 | 119 | 213 | 153 | 86 | 143 | 85 | 333 | 376 | 389 | 218 | 160 | 106 | 95 | 140 | 49 | 240 | 363 | 344 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.7 | 4.4 | 4.1 | 3.9 | 3.9 | 3.6 | 3.2 | 3.4 | 3.4 | 6.2 | 3.1 | 3.3 | 4.5 | 4.4 | 4.7 | 6.7 | 8.1 | 7.4 | 4.4 | 4.4 | 5.2 |
Std Deviation (1e-4) | 1.0 | 1.2 | 2.6 | 1.6 | 1.5 | 1.5 | 1.6 | 1.6 | 1.9 | 9.1 | 1.4 | 1.9 | 1.3 | 1.2 | 1.7 | 1.4 | 1.7 | 1.7 | 1.8 | 1.8 | 1.7 |
Intensity Change (Log2) | – | – | – | -0.08 | -0.06 | -0.19 | -0.36 | -0.27 | -0.25 | 0.61 | -0.39 | -0.3 | 0.12 | 0.09 | 0.19 | 0.72 | 0.99 | 0.85 | 0.09 | 0.1 | 0.33 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 1.9902 | 1.3109 | 1.5202 | 1.0501 | 1.3056 | 1.2665 | 2.2282 | 2.2578 | 2.7056 | 2.0506 | 2.6207 | 2.4064 | 5.22 | 3.7846 | 3.2473 | 4.1901 | 4.4989 | 2.5492 |
Actin | 0.049 | 0.0008 | 0.0466 | 0.0006 | 0.0415 | 0.0072 | 0.0028 | 0.0155 | 0.0181 | 0 | 0.0541 | 0.0301 | 0.1897 | 0 | 0.0083 | 0.0004 | 0.0003 | 0.0127 |
Bud | 0.0005 | 0.0019 | 0.0114 | 0.0002 | 0.0001 | 0.0007 | 0.0001 | 0.0032 | 0.0003 | 0 | 0.0004 | 0.0004 | 0.0032 | 0 | 0 | 0.0001 | 0.1188 | 0.0031 |
Bud Neck | 0.0031 | 0.0004 | 0.0007 | 0.0001 | 0.0005 | 0.0033 | 0.0001 | 0.0001 | 0.0003 | 0 | 0.0002 | 0.0004 | 0.0097 | 0 | 0.0001 | 0.0035 | 0.001 | 0.0301 |
Bud Periphery | 0.0007 | 0.0051 | 0.0111 | 0.0007 | 0.0002 | 0.002 | 0.0001 | 0.0071 | 0.0005 | 0 | 0.0008 | 0.0007 | 0.0092 | 0 | 0.0001 | 0.0006 | 0.0457 | 0.0142 |
Bud Site | 0.0082 | 0.0118 | 0.0035 | 0.0001 | 0.0003 | 0.0016 | 0.0003 | 0.009 | 0.0025 | 0 | 0.0002 | 0.0004 | 0.0046 | 0 | 0.0001 | 0.0005 | 0.0128 | 0.0012 |
Cell Periphery | 0.0013 | 0.0012 | 0.0013 | 0.0004 | 0.0002 | 0.0003 | 0.0002 | 0.0008 | 0.0006 | 0 | 0.0001 | 0.0002 | 0.0014 | 0.0001 | 0.0001 | 0.0073 | 0.003 | 0.0005 |
Cytoplasm | 0.1072 | 0.1869 | 0.1589 | 0.1513 | 0.0885 | 0.1557 | 0.1768 | 0.1152 | 0.1543 | 0.0009 | 0.0956 | 0.2056 | 0.0044 | 0.1067 | 0.0693 | 0.3111 | 0.0375 | 0.1607 |
Cytoplasmic Foci | 0.0466 | 0.0121 | 0.0116 | 0.0062 | 0.0033 | 0.0119 | 0.0041 | 0.0052 | 0.0326 | 0.0002 | 0.0016 | 0.0159 | 0.0054 | 0.001 | 0.0028 | 0.0042 | 0.0092 | 0.0055 |
Eisosomes | 0.0038 | 0.0002 | 0.0004 | 0.0002 | 0.0003 | 0.0002 | 0.0002 | 0.0004 | 0.0006 | 0 | 0.0004 | 0.0001 | 0.0019 | 0.0002 | 0.0003 | 0.0004 | 0 | 0.0002 |
Endoplasmic Reticulum | 0.0923 | 0.0497 | 0.0836 | 0.1319 | 0.1645 | 0.0402 | 0.1922 | 0.0646 | 0.052 | 0 | 0.1786 | 0.0501 | 0.0345 | 0.0064 | 0.1842 | 0.0949 | 0.0057 | 0.1002 |
Endosome | 0.0154 | 0.0084 | 0.0049 | 0.0078 | 0.0231 | 0.0065 | 0.0199 | 0.0036 | 0.0205 | 0 | 0.0029 | 0.0285 | 0.0728 | 0.0003 | 0.0044 | 0.0049 | 0.061 | 0.0015 |
Golgi | 0.0052 | 0.0007 | 0.0022 | 0.0005 | 0.0065 | 0.0023 | 0.0012 | 0.0075 | 0.0077 | 0 | 0.0113 | 0.0134 | 0.0312 | 0 | 0.0071 | 0.0003 | 0.0029 | 0.0003 |
Lipid Particles | 0.0352 | 0.0054 | 0.0037 | 0.0027 | 0.0085 | 0.0095 | 0.0011 | 0.0018 | 0.0062 | 0 | 0.0007 | 0.0114 | 0.0215 | 0.0002 | 0.0009 | 0.0055 | 0.0036 | 0.0006 |
Mitochondria | 0.0037 | 0.0012 | 0.0095 | 0.0011 | 0.0014 | 0.0078 | 0.0007 | 0.0015 | 0.0329 | 0 | 0.0179 | 0.0202 | 0.0267 | 0.0001 | 0.0689 | 0.0009 | 0.0026 | 0.0009 |
None | 0.4936 | 0.6844 | 0.6206 | 0.6756 | 0.6289 | 0.7163 | 0.57 | 0.7548 | 0.6474 | 0.9988 | 0.6325 | 0.591 | 0.5021 | 0.8835 | 0.6221 | 0.5399 | 0.6084 | 0.6603 |
Nuclear Periphery | 0.0341 | 0.0091 | 0.0048 | 0.0129 | 0.0244 | 0.0162 | 0.0142 | 0.0041 | 0.0082 | 0 | 0.0007 | 0.0061 | 0.0489 | 0.0003 | 0.0109 | 0.0042 | 0.002 | 0.0026 |
Nucleolus | 0.0128 | 0.001 | 0.0006 | 0.0003 | 0.0002 | 0.0006 | 0.0003 | 0.0003 | 0.0003 | 0 | 0 | 0.0001 | 0.0011 | 0.0001 | 0.0001 | 0.0006 | 0.0014 | 0.0002 |
Nucleus | 0.0285 | 0.0068 | 0.0033 | 0.0021 | 0.0014 | 0.0067 | 0.007 | 0.0011 | 0.0011 | 0 | 0.0004 | 0.0015 | 0.0042 | 0.0002 | 0.0034 | 0.0041 | 0.0045 | 0.002 |
Peroxisomes | 0.0314 | 0.0023 | 0.0152 | 0.0003 | 0.0005 | 0.0033 | 0.0002 | 0.0008 | 0.0081 | 0 | 0.0007 | 0.0202 | 0.0037 | 0 | 0.0134 | 0.0001 | 0.0003 | 0.0004 |
Punctate Nuclear | 0.022 | 0.0057 | 0.0031 | 0.001 | 0.0033 | 0.0059 | 0.0062 | 0.0013 | 0.0018 | 0 | 0.0002 | 0.0012 | 0.0038 | 0.0001 | 0.0002 | 0.0007 | 0.0006 | 0.0014 |
Vacuole | 0.0042 | 0.0047 | 0.0024 | 0.0032 | 0.0012 | 0.0014 | 0.0017 | 0.0017 | 0.0026 | 0 | 0.0004 | 0.0016 | 0.0095 | 0.0005 | 0.0028 | 0.0152 | 0.0735 | 0.0012 |
Vacuole Periphery | 0.0013 | 0.0004 | 0.0005 | 0.0007 | 0.0011 | 0.0005 | 0.0006 | 0.0004 | 0.0014 | 0 | 0.0002 | 0.0007 | 0.0105 | 0 | 0.0005 | 0.0004 | 0.0049 | 0.0002 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 72.5516 | 47.1685 | 59.7077 | 66.2617 | 66.9027 | 51.1845 | 66.2779 | 62.9577 | 68.4448 | 70.0485 |
Translational Efficiency | 1.0089 | 1.2201 | 0.9612 | 0.7998 | 0.7837 | 1.2686 | 0.9448 | 0.8706 | 0.7831 | 0.7788 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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