Standard name | |
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Human Ortholog | |
Description | Zinc cluster protein proposed to be a transcriptional regulator; regulator involved in the stress response; null mutants have a respiratory deficiency, calcofluor white sensitivity and slightly increased cycloheximide resistance |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 |
Bud | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 1 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 2 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 1 | 0 | 0 | 0 | 1 | 3 | 3 | 13 | 11 | – | 3 | 5 | 0 | 1 | 2 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 2 | 2 | 3 | 10 | 8 | 14 | 12 | 11 | – | 7 | 7 | 16 | 41 | 48 | 33 | 17 | 29 | 0 | 0 | 0 | 0 | 0 | 1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 1 | 4 | 5 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 2 | 0 | 2 | 2 | 1 | 1 | 0 | 0 | 0 | 1 | 5 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 2 |
Mitochondria | 0 | 4 | 14 | 39 | 15 | 51 | 92 | 67 | 104 | – | 60 | 64 | 5 | 0 | 24 | 14 | 3 | 7 | 1 | 0 | 1 | 0 | 1 | 3 |
Nucleus | 240 | 141 | 168 | 159 | 181 | 179 | 224 | 311 | 201 | – | 116 | 128 | 213 | 244 | 242 | 365 | 184 | 176 | 237 | 144 | 166 | 122 | 161 | 171 |
Nuclear Periphery | 1 | 1 | 0 | 1 | 2 | 3 | 7 | 6 | 2 | – | 3 | 3 | 0 | 4 | 2 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 2 | 1 | 1 | 11 | 2 | 18 | 33 | 43 | 40 | – | 31 | 36 | 3 | 5 | 16 | 2 | 0 | 4 | 0 | 0 | 0 | 0 | 6 | 25 |
Peroxisomes | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 2 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | – | 0 | 0 | 0 | 2 | 3 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 4 |
Vac/Vac Membrane | 1 | 0 | 2 | 2 | 5 | 0 | 1 | 1 | 1 | – | 1 | 1 | 2 | 2 | 8 | 10 | 5 | 11 | 1 | 5 | 5 | 4 | 19 | 48 |
Unique Cell Count | 245 | 145 | 173 | 174 | 202 | 200 | 276 | 362 | 258 | 159 | 159 | 230 | 293 | 309 | 411 | 212 | 216 | 244 | 155 | 175 | 134 | 202 | 273 | |
Labelled Cell Count | 250 | 149 | 187 | 215 | 216 | 264 | 375 | 457 | 372 | 222 | 245 | 239 | 303 | 348 | 434 | 217 | 233 | 244 | 155 | 175 | 134 | 202 | 273 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 8.8 | 7.0 | 5.7 | 5.5 | 6.1 | 5.2 | 4.8 | 5.1 | 4.6 | – | 4.6 | 4.6 | 7.4 | 6.9 | 6.1 | 7.9 | 8.8 | 9.0 | 6.9 | 7.1 | 7.8 |
Std Deviation (1e-4) | 1.6 | 1.4 | 0.8 | 1.1 | 1.8 | 1.4 | 1.2 | 1.3 | 1.2 | – | 1.1 | 1.1 | 1.8 | 1.8 | 1.8 | 1.5 | 2.0 | 2.3 | 1.4 | 1.5 | 1.4 |
Intensity Change (Log2) | – | – | – | -0.04 | 0.1 | -0.12 | -0.24 | -0.16 | -0.3 | – | -0.3 | -0.31 | 0.38 | 0.28 | 0.1 | 0.47 | 0.64 | 0.66 | 0.29 | 0.32 | 0.45 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 2.1 | 0 | 2.2 | 0 | 1.8 | – | 0 | 0 | 2.8 | 4.6 | 5.0 | 3.2 | 3.1 | 4.4 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 3.7 | -0.2 | 4.4 | 0 | 3.1 | 0 | – | 0 | 0 | -2.8 | -4.9 | -0.1 | -2.4 | -3.2 | -2.1 |
Nucleus | -2.3 | -2.9 | -2.9 | -4.9 | -4.0 | -5.6 | – | -6.3 | -4.9 | -2.0 | -4.5 | -5.6 | -3.2 | -3.6 | -4.8 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 2.9 | 0 | 3.7 | 0 | 4.5 | 0 | – | 0 | 0 | 0 | 0 | 2.6 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.1 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 6.6234 | 6.3094 | 6.0582 | 5.5402 | 5.5974 | 5.9248 | 6.5886 | 6.4589 | 6.4966 | 5.946 | 6.4066 | 6.2822 | 6.6714 | 6.2767 | 5.6332 | 5.8214 | 5.9821 | 6.2171 |
Actin | 0.0367 | 0 | 0.0077 | 0.0006 | 0 | 0 | 0.0567 | 0.0001 | 0.023 | 0.0138 | 0.0014 | 0.0023 | 0.0394 | 0 | 0.017 | 0.009 | 0.0002 | 0.0001 |
Bud | 0.0002 | 0 | 0 | 0.0001 | 0 | 0 | 0.0014 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0006 | 0 | 0.0002 | 0.0001 | 0 | 0 |
Bud Neck | 0.0023 | 0 | 0.0006 | 0.0017 | 0.0002 | 0.0003 | 0.0029 | 0 | 0.0002 | 0.001 | 0.0002 | 0.0004 | 0.0017 | 0 | 0.0006 | 0.0002 | 0.0002 | 0.0003 |
Bud Periphery | 0.0002 | 0 | 0 | 0.0003 | 0.0001 | 0 | 0.0037 | 0 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0.001 | 0 | 0.0002 | 0.0003 | 0.0001 | 0 |
Bud Site | 0.0003 | 0 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0.0074 | 0.0001 | 0.0003 | 0.0005 | 0.0002 | 0.0001 | 0.0023 | 0 | 0.0042 | 0.0013 | 0.0001 | 0 |
Cell Periphery | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 | 0.0009 | 0 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0006 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 |
Cytoplasm | 0.0034 | 0 | 0.0002 | 0.0008 | 0 | 0 | 0.0164 | 0.0086 | 0.0054 | 0.0045 | 0.0001 | 0.0001 | 0.0049 | 0.0007 | 0.0017 | 0.0001 | 0.0034 | 0.0003 |
Cytoplasmic Foci | 0.0016 | 0 | 0.0045 | 0.0004 | 0 | 0.0043 | 0.0401 | 0.0001 | 0.004 | 0.0007 | 0.0043 | 0.0003 | 0.0198 | 0 | 0.0122 | 0.0018 | 0.003 | 0.0005 |
Eisosomes | 0.0003 | 0 | 0.0002 | 0 | 0 | 0 | 0.0006 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0007 | 0 | 0.0001 | 0.0003 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.004 | 0 | 0.0009 | 0.0008 | 0 | 0 | 0.0136 | 0.0001 | 0.0051 | 0.0028 | 0.0001 | 0.0005 | 0.0092 | 0 | 0.0011 | 0.0002 | 0.0008 | 0.0001 |
Endosome | 0.0112 | 0 | 0.0009 | 0.0021 | 0 | 0.0004 | 0.0441 | 0.0001 | 0.0022 | 0.0094 | 0.0127 | 0.0028 | 0.0239 | 0 | 0.0129 | 0.0008 | 0.0051 | 0.0006 |
Golgi | 0.0048 | 0 | 0.0007 | 0.0002 | 0 | 0.0002 | 0.0131 | 0 | 0.0009 | 0.0023 | 0.0151 | 0.0019 | 0.0094 | 0 | 0.0038 | 0.0012 | 0.0018 | 0.0001 |
Lipid Particles | 0.0026 | 0 | 0.0022 | 0.0003 | 0 | 0.0015 | 0.0299 | 0 | 0.0033 | 0.0017 | 0.0049 | 0.001 | 0.0112 | 0 | 0.0049 | 0.0088 | 0.0174 | 0.0017 |
Mitochondria | 0.0012 | 0.0001 | 0.0004 | 0.001 | 0.0008 | 0.0001 | 0.0121 | 0.0001 | 0.0049 | 0.0019 | 0.0141 | 0.0026 | 0.0057 | 0.0001 | 0.0015 | 0.0064 | 0.0044 | 0.0003 |
None | 0.0029 | 0 | 0.0005 | 0.0003 | 0 | 0.0001 | 0.016 | 0.0004 | 0.003 | 0.0013 | 0 | 0.0001 | 0.0044 | 0 | 0.0004 | 0.0003 | 0.0467 | 0.0058 |
Nuclear Periphery | 0.0094 | 0.0002 | 0.0029 | 0.0085 | 0.0005 | 0.0001 | 0.042 | 0.0023 | 0.0055 | 0.0174 | 0.0002 | 0.009 | 0.0358 | 0.0026 | 0.0038 | 0.0006 | 0.006 | 0.0003 |
Nucleolus | 0.0092 | 0.0099 | 0.0078 | 0.0197 | 0.0588 | 0.0283 | 0.0211 | 0.0124 | 0.0107 | 0.0198 | 0.0195 | 0.0188 | 0.0199 | 0.0073 | 0.0068 | 0.0042 | 0.0258 | 0.0259 |
Nucleus | 0.9038 | 0.9896 | 0.9644 | 0.9553 | 0.9389 | 0.9595 | 0.6089 | 0.9703 | 0.922 | 0.9152 | 0.9245 | 0.9566 | 0.7557 | 0.9884 | 0.9146 | 0.9575 | 0.8783 | 0.9632 |
Peroxisomes | 0.0008 | 0 | 0.0033 | 0.0001 | 0 | 0.0011 | 0.0123 | 0 | 0.0022 | 0.0003 | 0.0017 | 0.0001 | 0.0068 | 0 | 0.0077 | 0.0054 | 0.0004 | 0.0002 |
Punctate Nuclear | 0.0044 | 0.0001 | 0.0025 | 0.0058 | 0.0001 | 0.0037 | 0.045 | 0.0051 | 0.0044 | 0.004 | 0.0001 | 0.0004 | 0.0342 | 0.0003 | 0.0035 | 0.001 | 0.0035 | 0.0003 |
Vacuole | 0.0004 | 0 | 0.0001 | 0.001 | 0.0002 | 0.0001 | 0.0064 | 0.0002 | 0.0011 | 0.0018 | 0.0004 | 0.0008 | 0.0088 | 0.0003 | 0.0018 | 0.0001 | 0.0016 | 0.0002 |
Vacuole Periphery | 0.0005 | 0 | 0.0001 | 0.0005 | 0.0002 | 0 | 0.0051 | 0.0001 | 0.0013 | 0.001 | 0.0003 | 0.0018 | 0.004 | 0.0002 | 0.0009 | 0.0002 | 0.0012 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 15.4362 | 10.9029 | 14.4111 | 19.4838 | 18.2842 | 9.9042 | 16.1914 | 17.0897 | 13.4721 | 18.8652 |
Translational Efficiency | 0.6554 | 1.0727 | 0.6911 | 0.4408 | 0.5973 | 1.0574 | 0.6317 | 0.6352 | 0.6961 | 0.5961 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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