Standard name | |
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Human Ortholog | |
Description | Protein involved in C/D snoRNP assembly; regulates abundance of Rsa1p; required for growth at high temperature; similar to human ZNHIT3 |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 2 | 1 | 1 | 1 | 6 | 9 | 5 | 14 | 5 | 8 | 0 | 0 | 1 | 0 | 0 | 0 | 8 | 2 | 1 | 2 | 2 | 2 |
Bud Neck | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 1 | 1 | 8 | 17 | 11 | 20 | 14 | 17 | 13 | 0 | 1 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 19 | 10 | 17 | 6 | 16 | 22 | 37 | 33 | 24 | 21 | 27 | 25 | 19 | 42 | 53 | 8 | 16 | 15 | 4 | 0 | 4 | 2 | 0 | 2 |
Endoplasmic Reticulum | 3 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 2 | 3 | 3 | 0 | 0 | 1 | 1 | 0 | 0 |
Endosome | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 3 | 0 | 0 | 1 | 3 | 4 | 1 | 2 | 1 | 3 |
Golgi | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 4 | 2 | 0 | 2 | 0 | 4 |
Mitochondria | 67 | 3 | 176 | 118 | 110 | 190 | 358 | 272 | 318 | 351 | 274 | 279 | 2 | 3 | 2 | 1 | 2 | 1 | 14 | 4 | 6 | 0 | 1 | 2 |
Nucleus | 789 | 243 | 241 | 170 | 194 | 151 | 306 | 271 | 252 | 315 | 235 | 237 | 159 | 210 | 191 | 104 | 86 | 86 | 769 | 239 | 243 | 157 | 70 | 101 |
Nuclear Periphery | 8 | 0 | 3 | 0 | 0 | 0 | 8 | 2 | 5 | 2 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
Nucleolus | 8 | 1 | 1 | 1 | 1 | 1 | 10 | 3 | 2 | 8 | 5 | 5 | 1 | 0 | 0 | 3 | 2 | 0 | 1 | 1 | 1 | 2 | 2 | 4 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 1 | 2 | 0 | 2 | 1 | 4 | 3 | 1 | 2 | 0 | 2 | 1 | 1 | 2 | 0 | 1 | 0 | 5 | 2 | 3 | 3 | 1 | 3 |
Vac/Vac Membrane | 17 | 6 | 3 | 1 | 4 | 3 | 6 | 11 | 6 | 6 | 5 | 8 | 8 | 14 | 14 | 6 | 15 | 12 | 41 | 11 | 25 | 15 | 21 | 28 |
Unique Cell Count | 848 | 262 | 291 | 199 | 263 | 247 | 489 | 418 | 392 | 468 | 375 | 379 | 187 | 270 | 258 | 117 | 118 | 109 | 863 | 275 | 293 | 193 | 106 | 157 |
Labelled Cell Count | 914 | 265 | 447 | 298 | 331 | 379 | 753 | 616 | 633 | 734 | 569 | 582 | 191 | 277 | 266 | 125 | 126 | 119 | 863 | 275 | 293 | 193 | 106 | 157 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.0 | 6.1 | 3.6 | 3.6 | 3.9 | 3.3 | 3.2 | 3.6 | 3.0 | 3.4 | 3.3 | 3.3 | 5.9 | 5.9 | 5.6 | 9.6 | 10.2 | 9.3 | 6.3 | 6.5 | 6.7 |
Std Deviation (1e-4) | 0.6 | 1.1 | 0.7 | 1.0 | 0.9 | 1.1 | 1.0 | 1.3 | 0.8 | 0.9 | 1.4 | 1.4 | 1.0 | 1.3 | 1.2 | 2.6 | 2.7 | 1.9 | 1.3 | 1.6 | 2.0 |
Intensity Change (Log2) | – | – | – | -0.02 | 0.1 | -0.16 | -0.21 | -0.03 | -0.3 | -0.11 | -0.16 | -0.14 | 0.7 | 0.69 | 0.62 | 1.41 | 1.49 | 1.35 | 0.79 | 0.83 | 0.88 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -1.5 | 0.1 | 1.4 | 0.9 | 1.1 | 0.2 | -0.8 | 0.7 | 0.4 | 1.7 | 3.7 | 5.2 | 0.4 | 2.6 | 2.6 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -13.1 | -15.1 | -14.9 | -11.0 | -10.9 | -10.7 |
Nucleus | 0.8 | -2.6 | -5.6 | -6.0 | -5.3 | -5.3 | -4.7 | -5.7 | -5.8 | 0.6 | -1.5 | -2.5 | 1.5 | -2.3 | -0.9 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 1.5 | 0 | 0 | 0 | 0 | 0 | 2.9 | 3.0 | 0 | 5.2 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 0.019 | 0.221 | -0.0531 | -0.2889 | -0.4589 | -0.1102 | 0.5764 | 1.1862 | 0.699 | 0.7665 | 0.5159 | 0.6338 | 0.1798 | 0.2053 | -0.0034 | 0.6148 | 0.9019 | 0.1427 |
Actin | 0.0169 | 0.0003 | 0.0087 | 0.0251 | 0.0022 | 0.0035 | 0.0187 | 0.0007 | 0.0085 | 0.0108 | 0.0117 | 0.0016 | 0.0048 | 0 | 0.0083 | 0.0003 | 0.0021 | 0.0026 |
Bud | 0.0022 | 0.0004 | 0.0006 | 0.0004 | 0.0012 | 0.0001 | 0.0002 | 0.0002 | 0.0013 | 0.0016 | 0.0033 | 0.0001 | 0.0005 | 0 | 0.0002 | 0.0001 | 0.001 | 0.0002 |
Bud Neck | 0.0029 | 0.0002 | 0.0009 | 0.0004 | 0.0013 | 0.0008 | 0.0021 | 0.0023 | 0.0013 | 0.0008 | 0.0272 | 0.001 | 0.004 | 0.0001 | 0.0004 | 0.0009 | 0.0008 | 0.0098 |
Bud Periphery | 0.0019 | 0.0001 | 0.0008 | 0.0006 | 0.0031 | 0.0001 | 0.0003 | 0.0002 | 0.0018 | 0.0044 | 0.0015 | 0.0002 | 0.001 | 0 | 0.0005 | 0.0001 | 0.0043 | 0.0004 |
Bud Site | 0.0026 | 0.0016 | 0.0035 | 0.0033 | 0.0017 | 0.0002 | 0.0018 | 0.0021 | 0.0057 | 0.0031 | 0.0022 | 0.0001 | 0.0061 | 0 | 0.0007 | 0.0003 | 0.0017 | 0.0008 |
Cell Periphery | 0.0003 | 0 | 0.0002 | 0.0001 | 0.0004 | 0 | 0.0001 | 0 | 0.0002 | 0.0002 | 0.0003 | 0 | 0.0004 | 0 | 0.0001 | 0 | 0.0002 | 0.0001 |
Cytoplasm | 0.007 | 0.0098 | 0.0039 | 0.0051 | 0.014 | 0.0005 | 0.0039 | 0.002 | 0.0039 | 0.0025 | 0.0029 | 0.0034 | 0.0061 | 0.0017 | 0.0011 | 0.0007 | 0.0024 | 0.0012 |
Cytoplasmic Foci | 0.0227 | 0.0013 | 0.008 | 0.0026 | 0.0161 | 0.0023 | 0.0219 | 0.0011 | 0.0049 | 0.0325 | 0.0045 | 0.0005 | 0.0113 | 0 | 0.0062 | 0.0004 | 0.0126 | 0.0033 |
Eisosomes | 0.0002 | 0 | 0.0002 | 0.0002 | 0.0001 | 0 | 0.0002 | 0 | 0.0002 | 0.0002 | 0.0005 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0021 | 0.0005 | 0.0008 | 0.0009 | 0.0008 | 0.0008 | 0.0011 | 0.0001 | 0.0007 | 0.0005 | 0.0005 | 0.0014 | 0.0014 | 0.0002 | 0.0004 | 0.0001 | 0.0016 | 0.0004 |
Endosome | 0.0158 | 0.0007 | 0.0196 | 0.0068 | 0.0021 | 0.0098 | 0.014 | 0.0005 | 0.0094 | 0.0365 | 0.0021 | 0.002 | 0.012 | 0.0001 | 0.0033 | 0.0008 | 0.0364 | 0.0049 |
Golgi | 0.0044 | 0 | 0.004 | 0.0035 | 0.0006 | 0.0102 | 0.0048 | 0.0005 | 0.0036 | 0.0117 | 0.002 | 0.0007 | 0.0038 | 0 | 0.0018 | 0.0002 | 0.025 | 0.0021 |
Lipid Particles | 0.0175 | 0.0002 | 0.0068 | 0.0043 | 0.0015 | 0.0111 | 0.0098 | 0.0003 | 0.0047 | 0.0397 | 0.0227 | 0.0006 | 0.0135 | 0 | 0.0016 | 0.0006 | 0.0287 | 0.0031 |
Mitochondria | 0.0116 | 0.0003 | 0.012 | 0.0019 | 0.0053 | 0.0044 | 0.0016 | 0.0004 | 0.0024 | 0.0275 | 0.0017 | 0.0184 | 0.0029 | 0.0001 | 0.0095 | 0.0002 | 0.0344 | 0.0089 |
None | 0.0108 | 0.0341 | 0.0106 | 0.0087 | 0.0582 | 0.0004 | 0.0073 | 0.0013 | 0.0008 | 0.002 | 0.0042 | 0.0006 | 0.0145 | 0.0005 | 0.0076 | 0.0003 | 0.0024 | 0.0005 |
Nuclear Periphery | 0.0287 | 0.025 | 0.0094 | 0.0228 | 0.0494 | 0.0086 | 0.0061 | 0.0077 | 0.006 | 0.0037 | 0.0029 | 0.0039 | 0.012 | 0.006 | 0.0032 | 0.0074 | 0.0242 | 0.0115 |
Nucleolus | 0.0182 | 0.0056 | 0.0062 | 0.0045 | 0.0168 | 0.0167 | 0.0059 | 0.0052 | 0.0034 | 0.0046 | 0.0196 | 0.0131 | 0.0051 | 0.0038 | 0.0037 | 0.0206 | 0.0195 | 0.0111 |
Nucleus | 0.7626 | 0.8825 | 0.8712 | 0.8975 | 0.8123 | 0.9121 | 0.8799 | 0.971 | 0.9325 | 0.7179 | 0.8481 | 0.9445 | 0.8869 | 0.9841 | 0.9433 | 0.9286 | 0.7231 | 0.9219 |
Peroxisomes | 0.0256 | 0 | 0.0087 | 0.0025 | 0.0008 | 0.0019 | 0.009 | 0.0004 | 0.0041 | 0.0366 | 0.0226 | 0.0004 | 0.0035 | 0 | 0.0039 | 0.0002 | 0.0111 | 0.0022 |
Punctate Nuclear | 0.036 | 0.0358 | 0.0196 | 0.0078 | 0.0098 | 0.0153 | 0.01 | 0.0035 | 0.0025 | 0.0613 | 0.0187 | 0.007 | 0.0062 | 0.0031 | 0.0023 | 0.0381 | 0.037 | 0.0133 |
Vacuole | 0.007 | 0.0008 | 0.0033 | 0.0005 | 0.0017 | 0.0005 | 0.001 | 0.0002 | 0.0018 | 0.0011 | 0.0006 | 0.0002 | 0.0027 | 0.0001 | 0.0011 | 0.0002 | 0.014 | 0.001 |
Vacuole Periphery | 0.003 | 0.0004 | 0.0011 | 0.0005 | 0.001 | 0.0006 | 0.0004 | 0.0003 | 0.0004 | 0.0007 | 0.0003 | 0.0002 | 0.0013 | 0 | 0.0008 | 0.0001 | 0.0174 | 0.0006 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 3.3436 | 1.9927 | 2.9573 | 7.7102 | 2.8901 | 2.2279 | 5.037 | 4.0796 | 6.3885 | 9.3623 |
Translational Efficiency | – | – | – | – | – | – | – | – | – | – |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | – |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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