Standard name | |
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Human Ortholog | |
Description | FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier and is involved in gene tethering at the nuclear periphery; NUP100 has a paralog, NUP116, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 2 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 4 | 5 |
Bud | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 3 | 2 | 1 | 4 | 1 | 1 | 0 | 1 | 0 | 0 | 2 | 1 | 1 | 1 | 0 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 1 | – | 3 | 3 | 5 | 5 | 2 | 0 | 0 | 2 | 0 | 0 | 1 | – | – | – | – | – | – |
Cell Periphery | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | 3 | 6 | 12 | 11 | 10 | – | 18 | 10 | 8 | 10 | 3 | 14 | 14 | 20 | 6 | 9 | 13 | 0 | 0 | 0 | 1 | 1 | 0 |
Endoplasmic Reticulum | 7 | 0 | 0 | 1 | 0 | 1 | – | 1 | 1 | 2 | 2 | 1 | 1 | 0 | 2 | 5 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 |
Endosome | 1 | 0 | 9 | 4 | 18 | 23 | – | 43 | 16 | 16 | 11 | 13 | 2 | 1 | 1 | 3 | 4 | 3 | 1 | 2 | 3 | 2 | 5 | 20 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 2 | 2 | 0 | 2 | 0 | 4 | 11 |
Mitochondria | 9 | 28 | 42 | 31 | 31 | 179 | – | 187 | 257 | 252 | 194 | 269 | 2 | 2 | 2 | 5 | 7 | 8 | 2 | 2 | 10 | 18 | 38 | 72 |
Nucleus | 5 | 9 | 8 | 16 | 18 | 20 | – | 34 | 13 | 34 | 24 | 24 | 13 | 13 | 13 | 4 | 7 | 6 | 1 | 0 | 3 | 0 | 2 | 2 |
Nuclear Periphery | 192 | 96 | 253 | 233 | 293 | 392 | – | 503 | 365 | 423 | 297 | 440 | 158 | 158 | 119 | 76 | 67 | 75 | 212 | 105 | 296 | 218 | 213 | 290 |
Nucleolus | 26 | 8 | 41 | 46 | 83 | 138 | – | 214 | 146 | 176 | 125 | 238 | 9 | 9 | 4 | 10 | 11 | 22 | 1 | 1 | 4 | 2 | 2 | 2 |
Peroxisomes | 0 | 0 | 1 | 0 | 1 | 5 | – | 6 | 2 | 3 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 4 | 7 |
SpindlePole | 0 | 0 | 0 | 0 | 1 | 3 | – | 7 | 1 | 6 | 3 | 4 | 5 | 5 | 6 | 3 | 0 | 2 | 0 | 0 | 1 | 0 | 1 | 2 |
Vac/Vac Membrane | 63 | 31 | 55 | 29 | 59 | 50 | – | 92 | 28 | 33 | 23 | 34 | 46 | 45 | 44 | 26 | 34 | 30 | 6 | 4 | 8 | 1 | 10 | 14 |
Unique Cell Count | 218 | 116 | 310 | 284 | 388 | 538 | 829 | 560 | 674 | 471 | 683 | 196 | 196 | 171 | 105 | 104 | 117 | 232 | 122 | 340 | 251 | 290 | 435 | |
Labelled Cell Count | 308 | 175 | 415 | 372 | 515 | 823 | 1108 | 846 | 961 | 696 | 1035 | 252 | 249 | 214 | 140 | 141 | 162 | 232 | 122 | 340 | 251 | 290 | 435 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 11.8 | 7.5 | 10.5 | 10.4 | 9.4 | 8.0 | – | 8.3 | 7.8 | 7.9 | 7.7 | 8.0 | 9.5 | 9.5 | 10.1 | 8.5 | 9.7 | 11.4 | 11.7 | 12.3 | 12.5 |
Std Deviation (1e-4) | 3.8 | 1.6 | 2.3 | 2.5 | 2.3 | 2.0 | – | 2.2 | 2.0 | 2.3 | 2.3 | 2.2 | 2.3 | 2.3 | 2.5 | 1.9 | 2.6 | 2.8 | 2.5 | 2.1 | 2.3 |
Intensity Change (Log2) | – | – | – | -0.01 | -0.15 | -0.39 | – | -0.34 | -0.43 | -0.4 | -0.44 | -0.39 | -0.14 | -0.14 | -0.05 | -0.29 | -0.11 | 0.12 | 0.16 | 0.23 | 0.26 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1.6 | 0.8 | -0.1 | – | 0.2 | -0.2 | 0 | 0.2 | 0 | 2.9 | 2.9 | 4.5 | 0 | 0 | 4.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | -1.2 | 1.2 | 1.0 | – | 1.6 | 0 | -0.5 | -0.5 | -1.0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | -1.0 | -2.4 | 6.3 | – | 3.4 | 9.6 | 7.6 | 8.2 | 8.1 | -4.9 | -4.9 | -4.5 | -2.5 | -1.9 | -1.9 |
Nucleus | 1.9 | 1.4 | 0.9 | – | 1.2 | -0.2 | 1.8 | 1.7 | 0.8 | 2.2 | 2.2 | 2.6 | 0 | 0 | 0 |
Nuclear Periphery | 0.1 | -1.9 | -2.9 | – | -6.7 | -5.1 | -5.9 | -5.6 | -5.5 | -0.3 | -0.3 | -3.0 | -2.0 | -3.6 | -3.8 |
Nucleolus | 1.0 | 2.8 | 4.3 | – | 4.5 | 4.4 | 4.5 | 4.4 | 7.0 | -3.2 | -3.2 | -3.9 | -1.0 | -0.7 | 1.4 |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -2.6 | -0.9 | -3.6 | – | -3.0 | -6.1 | -6.6 | -5.9 | -6.5 | 1.6 | 1.4 | 2.1 | 1.6 | 3.2 | 1.8 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 7.9405 | 7.5887 | 7.5501 | 7.095 | 6.8585 | 7.0226 | 7.3003 | 8.7797 | 7.616 | 7.0453 | 6.3028 | 7.4224 | 7.4377 | 7.9676 | 7.2414 | 6.9452 | 6.8572 | 7.3882 |
Actin | 0.0157 | 0.0001 | 0.0096 | 0.0174 | 0.0003 | 0.0016 | 0.0208 | 0.0002 | 0.0238 | 0.0003 | 0.0013 | 0.0004 | 0.0809 | 0.0017 | 0.0326 | 0.0237 | 0.005 | 0.0002 |
Bud | 0.0002 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0007 | 0 | 0.0002 | 0 | 0 | 0 | 0.0011 | 0.0001 | 0.0003 | 0.0002 | 0 | 0 |
Bud Neck | 0.0006 | 0 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0028 | 0 | 0.0002 | 0 | 0.0001 | 0 | 0.0007 | 0 | 0.0009 | 0.0004 | 0 | 0 |
Bud Periphery | 0.0007 | 0.0001 | 0.0003 | 0.0002 | 0.0001 | 0 | 0.0021 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0.0046 | 0.0004 | 0.0008 | 0.0005 | 0.0002 | 0 |
Bud Site | 0.0005 | 0 | 0.0001 | 0.0002 | 0 | 0.0002 | 0.0054 | 0 | 0.0109 | 0 | 0 | 0 | 0.001 | 0.0001 | 0.0188 | 0.0018 | 0 | 0 |
Cell Periphery | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 | 0.0007 | 0 | 0.0003 | 0 | 0 | 0 | 0.0006 | 0.0001 | 0.0003 | 0.0001 | 0 | 0 |
Cytoplasm | 0.0003 | 0 | 0.0001 | 0.0016 | 0 | 0.0001 | 0.0107 | 0.0181 | 0.0015 | 0 | 0.0002 | 0.0004 | 0.0021 | 0.0001 | 0.0043 | 0.0001 | 0 | 0 |
Cytoplasmic Foci | 0.002 | 0 | 0.0002 | 0.0029 | 0.0001 | 0.0019 | 0.0144 | 0.0002 | 0.0045 | 0.0006 | 0.02 | 0.0002 | 0.0017 | 0.0002 | 0.0023 | 0.0077 | 0.0003 | 0 |
Eisosomes | 0.0003 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0009 | 0 | 0.0002 | 0 | 0 | 0 | 0.0016 | 0.0001 | 0.0006 | 0.0001 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0017 | 0.0005 | 0.0008 | 0.0023 | 0.0005 | 0.0002 | 0.0119 | 0.0022 | 0.0011 | 0.0006 | 0.0006 | 0.0019 | 0.02 | 0.002 | 0.006 | 0.0015 | 0.0006 | 0.0002 |
Endosome | 0.0023 | 0.0002 | 0.0013 | 0.0037 | 0.0006 | 0.0005 | 0.0337 | 0.0017 | 0.0016 | 0.0015 | 0.0075 | 0.0077 | 0.0312 | 0.0009 | 0.0053 | 0.0014 | 0.0015 | 0.0001 |
Golgi | 0.0019 | 0.0001 | 0.0006 | 0.0013 | 0.0003 | 0.0006 | 0.0077 | 0.0001 | 0.0032 | 0.002 | 0.0085 | 0.0006 | 0.0086 | 0.0018 | 0.0027 | 0.003 | 0.0017 | 0.0001 |
Lipid Particles | 0.0117 | 0.0013 | 0.0019 | 0.0024 | 0.003 | 0.0046 | 0.0551 | 0.0013 | 0.0024 | 0.0458 | 0.0462 | 0.0015 | 0.0064 | 0.0404 | 0.0093 | 0.0081 | 0.0078 | 0.0008 |
Mitochondria | 0.0084 | 0.0009 | 0.0018 | 0.0025 | 0.002 | 0.0012 | 0.011 | 0.0033 | 0.0139 | 0.0013 | 0.0188 | 0.0114 | 0.0358 | 0.0439 | 0.0303 | 0.0055 | 0.0061 | 0.0006 |
None | 0.0008 | 0.0001 | 0.0008 | 0.0045 | 0.0002 | 0.0001 | 0.0117 | 0.0004 | 0.0003 | 0.0001 | 0.0002 | 0.0001 | 0.0126 | 0.0004 | 0.0193 | 0.0005 | 0.0003 | 0.0001 |
Nuclear Periphery | 0.891 | 0.9497 | 0.9184 | 0.9117 | 0.9411 | 0.9565 | 0.7006 | 0.859 | 0.8382 | 0.8998 | 0.8437 | 0.9452 | 0.6799 | 0.8041 | 0.7893 | 0.8039 | 0.9333 | 0.96 |
Nucleolus | 0.0009 | 0.0005 | 0.0004 | 0.0005 | 0.0031 | 0.0003 | 0.0132 | 0.001 | 0.0005 | 0.0005 | 0.0012 | 0.0003 | 0.0019 | 0.0005 | 0.001 | 0.0165 | 0.0012 | 0.0006 |
Nucleus | 0.0083 | 0.0066 | 0.0203 | 0.0054 | 0.0159 | 0.0068 | 0.0255 | 0.0458 | 0.0402 | 0.0168 | 0.0123 | 0.0118 | 0.0121 | 0.0423 | 0.01 | 0.0058 | 0.0088 | 0.0205 |
Peroxisomes | 0.0022 | 0 | 0.0003 | 0.0008 | 0.0001 | 0.0061 | 0.009 | 0 | 0.0036 | 0.0003 | 0.0087 | 0.0001 | 0.0014 | 0.0002 | 0.005 | 0.0221 | 0.0005 | 0 |
Punctate Nuclear | 0.0023 | 0.0003 | 0.0007 | 0.0065 | 0.0009 | 0.0024 | 0.0117 | 0.0058 | 0.0005 | 0.0009 | 0.002 | 0.0003 | 0.0038 | 0.0004 | 0.002 | 0.0455 | 0.0018 | 0.0004 |
Vacuole | 0.0011 | 0.0006 | 0.0005 | 0.0005 | 0.0006 | 0.0001 | 0.0061 | 0.0023 | 0.0007 | 0.0004 | 0.001 | 0.0004 | 0.0041 | 0.001 | 0.0013 | 0.0007 | 0.0003 | 0.0002 |
Vacuole Periphery | 0.0472 | 0.039 | 0.0416 | 0.0352 | 0.0311 | 0.0166 | 0.0443 | 0.0585 | 0.0519 | 0.0289 | 0.0275 | 0.0174 | 0.088 | 0.0592 | 0.0577 | 0.0508 | 0.0302 | 0.0162 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 31.6079 | 29.4543 | 29.2265 | 37.6733 | 42.4713 | 29.1015 | 37.9191 | 38.4477 | 30.3176 | 40.3916 |
Translational Efficiency | 1.2546 | 1.573 | 1.3138 | 0.7081 | 0.906 | 1.4912 | 1.0151 | 0.9522 | 1.1312 | 1.0994 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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