Standard name | |
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Human Ortholog | |
Description | Widely-conserved NADHX dehydratase; converts (S)-NADHX to NADH in ATP-dependent manner; YKL151C promoter contains STREs (stress response elements) and expression is induced by heat shock or methyl methanesulfonate; downstream intergenic region drives antisense expression and mediates coordinated regulation of YKL151C and GPM1 phosphoglycerate mutase; protein abundance increases in response to DNA replication stress; homolog of Carkd in mammals and C-terminus of YjeF in E.coli |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 1 | 1 | 2 |
Bud | 1 | 0 | 1 | 1 | 0 | 1 | 2 | 3 | 5 | 0 | 11 | 5 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 5 | 5 |
Bud Neck | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 1 | 4 | 0 | 4 | 6 | 4 | 3 | 1 | 3 | 5 | 0 | 0 | 3 | 4 | 3 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 283 | 129 | 153 | 252 | 376 | 269 | 284 | 307 | 147 | 101 | 167 | 141 | 225 | 277 | 330 | 95 | 76 | 94 | 275 | 124 | 158 | 143 | 265 | 293 |
Endoplasmic Reticulum | 3 | 1 | 3 | 0 | 0 | 1 | 0 | 6 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 2 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 2 | 4 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 0 |
Mitochondria | 10 | 0 | 0 | 10 | 11 | 41 | 80 | 72 | 81 | 42 | 123 | 72 | 0 | 1 | 1 | 1 | 0 | 1 | 2 | 0 | 3 | 1 | 2 | 2 |
Nucleus | 0 | 0 | 0 | 0 | 2 | 3 | 7 | 5 | 8 | 6 | 4 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 1 | 0 | 0 | 3 | 1 | 1 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 |
Vac/Vac Membrane | 2 | 1 | 1 | 5 | 12 | 12 | 24 | 43 | 27 | 21 | 25 | 36 | 3 | 8 | 3 | 5 | 2 | 1 | 1 | 1 | 0 | 0 | 2 | 2 |
Unique Cell Count | 292 | 131 | 157 | 259 | 390 | 299 | 354 | 396 | 226 | 153 | 273 | 236 | 228 | 284 | 336 | 100 | 78 | 96 | 296 | 132 | 170 | 153 | 292 | 328 |
Labelled Cell Count | 299 | 131 | 159 | 274 | 401 | 332 | 406 | 444 | 277 | 174 | 339 | 273 | 231 | 287 | 339 | 108 | 83 | 104 | 296 | 132 | 170 | 153 | 292 | 328 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.4 | 6.9 | 6.0 | 5.9 | 6.1 | 5.4 | 5.4 | 6.2 | 5.6 | 5.6 | 5.2 | 5.9 | 6.0 | 7.6 | 8.3 | 14.5 | 15.6 | 14.2 | 5.6 | 5.8 | 6.8 |
Std Deviation (1e-4) | 0.7 | 1.5 | 1.8 | 2.2 | 1.7 | 1.2 | 1.3 | 1.5 | 2.5 | 1.5 | 1.4 | 1.6 | 1.6 | 1.9 | 2.5 | 2.9 | 3.6 | 2.5 | 1.3 | 1.8 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.01 | 0.05 | -0.14 | -0.14 | 0.06 | -0.09 | -0.1 | -0.2 | -0.01 | 0.02 | 0.36 | 0.48 | 1.28 | 1.39 | 1.26 | -0.09 | -0.04 | 0.19 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -0.1 | -0.6 | -2.9 | -5.1 | -5.6 | -7.6 | -7.2 | -8.3 | -8.4 | 0.9 | 0.1 | 0.6 | -1.0 | 0 | 0.2 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 4.9 | 6.5 | 5.7 | 8.4 | 7.1 | 10.0 | 7.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 3.0 | 4.0 | 4.2 | 4.5 | 3.6 | 4.9 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.7453 | 3.9937 | 3.1652 | 2.8083 | 3.1766 | 3.3752 | 1.4499 | 2.0381 | 1.7655 | 2.0605 | 1.7103 | 1.7959 | 3.0006 | 3.7662 | 3.0731 | 3.5213 | 3.6628 | 3.603 |
Actin | 0.0037 | 0.0003 | 0.0041 | 0.0012 | 0.001 | 0.0017 | 0.0132 | 0.0005 | 0.0026 | 0.0007 | 0.0113 | 0.0023 | 0.0359 | 0.0015 | 0.0143 | 0.0631 | 0.0992 | 0.0043 |
Bud | 0.0022 | 0.0006 | 0.0036 | 0.0038 | 0.0002 | 0.0069 | 0.0013 | 0.0044 | 0.0004 | 0.0003 | 0.0005 | 0.0009 | 0.0006 | 0.0039 | 0.001 | 0.0036 | 0.0013 | 0.0004 |
Bud Neck | 0.0003 | 0.0003 | 0.0097 | 0.0006 | 0.0006 | 0.0014 | 0.0053 | 0.0002 | 0.0004 | 0.0006 | 0.0011 | 0.0012 | 0.0183 | 0.0002 | 0.0039 | 0.0281 | 0.002 | 0.0029 |
Bud Periphery | 0.0009 | 0.0002 | 0.0013 | 0.0006 | 0.0001 | 0.0027 | 0.0018 | 0.0012 | 0.0004 | 0.0002 | 0.0004 | 0.0007 | 0.0006 | 0.0022 | 0.0008 | 0.0023 | 0.0021 | 0.0002 |
Bud Site | 0.0032 | 0.0044 | 0.005 | 0.0038 | 0.0002 | 0.0006 | 0.0104 | 0.01 | 0.0049 | 0.0002 | 0.0015 | 0.0003 | 0.004 | 0.0089 | 0.0028 | 0.0106 | 0.0019 | 0.0004 |
Cell Periphery | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0002 | 0.0003 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0 |
Cytoplasm | 0.8159 | 0.9213 | 0.8261 | 0.8393 | 0.9122 | 0.8664 | 0.6219 | 0.8392 | 0.7681 | 0.8092 | 0.7015 | 0.7389 | 0.7837 | 0.9257 | 0.8913 | 0.72 | 0.6802 | 0.9308 |
Cytoplasmic Foci | 0.0122 | 0.0082 | 0.0122 | 0.0134 | 0.0113 | 0.0207 | 0.0372 | 0.0071 | 0.0125 | 0.0102 | 0.0346 | 0.0201 | 0.0243 | 0.0082 | 0.0099 | 0.047 | 0.0239 | 0.013 |
Eisosomes | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 | 0.0003 | 0 | 0.0002 | 0.0004 | 0.0003 | 0 |
Endoplasmic Reticulum | 0.0071 | 0.0031 | 0.0025 | 0.0042 | 0.0047 | 0.0035 | 0.0056 | 0.0019 | 0.0031 | 0.0017 | 0.0012 | 0.0044 | 0.0042 | 0.0022 | 0.0039 | 0.0069 | 0.0104 | 0.0023 |
Endosome | 0.0199 | 0.0079 | 0.0056 | 0.0142 | 0.0075 | 0.0114 | 0.0372 | 0.003 | 0.0123 | 0.0028 | 0.0661 | 0.0153 | 0.0165 | 0.0039 | 0.0132 | 0.0451 | 0.0584 | 0.0065 |
Golgi | 0.003 | 0.0005 | 0.0004 | 0.0012 | 0.0007 | 0.0011 | 0.0074 | 0.0002 | 0.0022 | 0.0002 | 0.0256 | 0.0023 | 0.0074 | 0.0004 | 0.0041 | 0.0125 | 0.0156 | 0.0011 |
Lipid Particles | 0.004 | 0.0001 | 0.0001 | 0.0005 | 0 | 0.0006 | 0.0085 | 0.0001 | 0.0032 | 0 | 0.0466 | 0.0065 | 0.0073 | 0.0001 | 0.0073 | 0.0045 | 0.0155 | 0.0016 |
Mitochondria | 0.0019 | 0.0005 | 0.0005 | 0.0362 | 0.0004 | 0.0012 | 0.0038 | 0.0002 | 0.0015 | 0.0003 | 0.0292 | 0.0044 | 0.0019 | 0.0006 | 0.0075 | 0.0067 | 0.0105 | 0.0019 |
None | 0.1085 | 0.0405 | 0.1056 | 0.0542 | 0.051 | 0.0558 | 0.2016 | 0.125 | 0.176 | 0.1663 | 0.034 | 0.1821 | 0.0663 | 0.0347 | 0.0195 | 0.0075 | 0.0069 | 0.0217 |
Nuclear Periphery | 0.0041 | 0.0021 | 0.0029 | 0.0023 | 0.0017 | 0.0026 | 0.0137 | 0.0007 | 0.0024 | 0.0011 | 0.0009 | 0.0027 | 0.0028 | 0.0008 | 0.0057 | 0.0097 | 0.0372 | 0.0019 |
Nucleolus | 0.0002 | 0.0001 | 0.0009 | 0.0006 | 0 | 0.0004 | 0.0008 | 0.0001 | 0.0006 | 0 | 0.0002 | 0.0002 | 0.0029 | 0.0001 | 0.0003 | 0.0004 | 0.0011 | 0.0001 |
Nucleus | 0.0047 | 0.0062 | 0.0104 | 0.0085 | 0.0054 | 0.0092 | 0.0103 | 0.0027 | 0.0032 | 0.0038 | 0.003 | 0.0031 | 0.006 | 0.0035 | 0.0038 | 0.0085 | 0.0127 | 0.0058 |
Peroxisomes | 0.0038 | 0.0001 | 0.0002 | 0.0011 | 0.0009 | 0.0043 | 0.0083 | 0 | 0.0026 | 0.0002 | 0.0357 | 0.0072 | 0.0097 | 0.001 | 0.0037 | 0.0128 | 0.0026 | 0.0011 |
Punctate Nuclear | 0.0015 | 0.0013 | 0.0065 | 0.0115 | 0.0006 | 0.0069 | 0.0057 | 0.0007 | 0.0014 | 0.0006 | 0.0016 | 0.006 | 0.004 | 0.0006 | 0.0042 | 0.0052 | 0.0097 | 0.0027 |
Vacuole | 0.0018 | 0.002 | 0.0017 | 0.0022 | 0.0013 | 0.0018 | 0.0041 | 0.0021 | 0.0014 | 0.0011 | 0.0034 | 0.001 | 0.0025 | 0.0012 | 0.0014 | 0.0029 | 0.005 | 0.001 |
Vacuole Periphery | 0.0008 | 0.0003 | 0.0003 | 0.0007 | 0.0003 | 0.0005 | 0.0016 | 0.0002 | 0.0004 | 0.0002 | 0.0014 | 0.0004 | 0.0005 | 0.0002 | 0.001 | 0.0017 | 0.0034 | 0.0003 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 20.6752 | 18.4824 | 17.3239 | 27.6179 | 19.0466 | 39.1524 | 24.343 | 29.2086 | 33.2655 | 27.7114 |
Translational Efficiency | 2.0597 | 1.5772 | 1.7458 | 1.7921 | 1.6074 | 1.3183 | 1.6375 | 1.6047 | 1.7052 | 1.4557 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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