Standard name | |
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Human Ortholog | |
Description | Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27A has a paralog, RPS27B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 1 | 8 | 12 | – | 16 | 21 | 26 | 35 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 3 | 0 | – | 2 | 2 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 8 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 2 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 3 | 9 | 6 | 12 | 14 | 20 | – | 29 | 32 | 35 | 36 | 2 | 7 | 5 | 2 | 4 | 2 | 0 | 0 | 1 | 1 | 0 | 0 |
Cytoplasm | 233 | 163 | 337 | 259 | 294 | 287 | 356 | – | 305 | 293 | 255 | 308 | 280 | 447 | 359 | 280 | 205 | 137 | 214 | 149 | 321 | 273 | 305 | 424 |
Endoplasmic Reticulum | 2 | 1 | 8 | 6 | 13 | 24 | 74 | – | 84 | 103 | 58 | 107 | 7 | 15 | 11 | 17 | 11 | 4 | 3 | 0 | 5 | 14 | 12 | 15 |
Endosome | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 4 | 20 | – | 14 | 27 | 25 | 29 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 1 | 4 | 0 | – | 9 | 3 | 6 | 18 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 1 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 0 | 1 | 3 | 4 | 12 | – | 2 | 4 | 7 | 4 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 0 | 3 | 3 | 4 |
Unique Cell Count | 236 | 164 | 343 | 265 | 313 | 333 | 479 | 427 | 441 | 366 | 480 | 288 | 458 | 371 | 282 | 206 | 138 | 227 | 157 | 337 | 301 | 331 | 460 | |
Labelled Cell Count | 237 | 167 | 354 | 272 | 324 | 350 | 495 | 463 | 485 | 415 | 538 | 291 | 469 | 376 | 300 | 222 | 144 | 227 | 157 | 337 | 301 | 331 | 460 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 116.1 | 112.5 | 92.9 | 80.5 | 65.1 | 40.4 | 44.7 | – | 36.7 | 36.4 | 33.3 | 32.1 | 106.5 | 100.1 | 108.1 | 150.3 | 138.7 | 155.8 | 102.1 | 107.9 | 113.9 |
Std Deviation (1e-4) | 26.8 | 25.7 | 16.8 | 16.3 | 13.4 | 12.7 | 9.4 | – | 8.6 | 8.1 | 8.3 | 7.6 | 25.0 | 24.0 | 23.7 | 38.9 | 37.5 | 40.8 | 28.0 | 29.4 | 27.0 |
Intensity Change (Log2) | – | – | – | -0.21 | -0.51 | -1.2 | -1.06 | – | -1.34 | -1.35 | -1.48 | -1.53 | 0.2 | 0.11 | 0.22 | 0.69 | 0.58 | 0.75 | 0.14 | 0.22 | 0.29 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 3.0 | – | 3.6 | 4.1 | 5.0 | 5.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -0.3 | 0.9 | 1.1 | 1.2 | – | 2.7 | 2.9 | 3.8 | 3.0 | -1.8 | -1.1 | -1.2 | 0 | 0 | 0 |
Cytoplasm | -0.5 | -2.9 | -5.9 | -9.3 | – | -9.9 | -11.1 | -10.2 | -11.7 | -0.9 | -0.6 | -1.3 | 1.2 | 1.3 | 0.8 |
Endoplasmic Reticulum | -0.1 | 1.3 | 3.0 | 6.2 | – | 7.4 | 8.4 | 6.2 | 8.1 | 0.1 | 0.8 | 0.5 | 2.3 | 1.9 | 0 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 3.8 | – | 3.4 | 4.7 | 4.9 | 4.6 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 3.6 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 3.0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 79.4699 | 112.0922 | 103.6246 | 94.9997 | 86.1518 | 92.037 | 100.4563 | 133.4568 | 117.513 | 103.6188 | 89.6878 | 107.0266 | 114.759 | 136.7962 | 130.4045 | 120.7661 | 110.8712 | 108.4415 |
Actin | 0.0168 | 0.0006 | 0.0019 | 0.0121 | 0.0024 | 0.0209 | 0.0119 | 0.0005 | 0.0028 | 0.0033 | 0.0067 | 0.0646 | 0.0019 | 0.0011 | 0.0051 | 0.0003 | 0.0051 | 0.002 |
Bud | 0.0049 | 0.0007 | 0.0013 | 0.004 | 0.0015 | 0.0039 | 0.0031 | 0.0034 | 0.003 | 0.0235 | 0.0027 | 0.0019 | 0.0035 | 0.001 | 0.0042 | 0.002 | 0.0027 | 0.0009 |
Bud Neck | 0.001 | 0.0006 | 0.0013 | 0.0021 | 0.001 | 0.0048 | 0.0008 | 0.0004 | 0.0008 | 0.0017 | 0.0006 | 0.0017 | 0.0008 | 0.0006 | 0.0008 | 0.0008 | 0.0013 | 0.0021 |
Bud Periphery | 0.0069 | 0.0005 | 0.0012 | 0.0025 | 0.0017 | 0.0069 | 0.0035 | 0.0008 | 0.0022 | 0.0185 | 0.0038 | 0.0009 | 0.0053 | 0.0005 | 0.0028 | 0.0008 | 0.0024 | 0.0002 |
Bud Site | 0.0013 | 0.0008 | 0.0014 | 0.0012 | 0.0004 | 0.0014 | 0.0039 | 0.0036 | 0.0014 | 0.0028 | 0.0021 | 0.001 | 0.0011 | 0.0006 | 0.0033 | 0.0002 | 0.0005 | 0.0007 |
Cell Periphery | 0.039 | 0.0222 | 0.0182 | 0.026 | 0.0051 | 0.0068 | 0.023 | 0.0035 | 0.0105 | 0.0209 | 0.0036 | 0.0025 | 0.021 | 0.0054 | 0.0072 | 0.0017 | 0.0063 | 0.0004 |
Cytoplasm | 0.5734 | 0.8891 | 0.8059 | 0.678 | 0.7579 | 0.6435 | 0.6397 | 0.9544 | 0.8372 | 0.6073 | 0.6269 | 0.5977 | 0.6475 | 0.9273 | 0.802 | 0.737 | 0.7159 | 0.7807 |
Cytoplasmic Foci | 0.0167 | 0.0011 | 0.0046 | 0.0081 | 0.0073 | 0.0124 | 0.023 | 0.0017 | 0.0049 | 0.0295 | 0.0164 | 0.0462 | 0.0064 | 0.0013 | 0.0021 | 0.0038 | 0.0047 | 0.0266 |
Eisosomes | 0.0004 | 0 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0011 | 0 | 0.0002 | 0.0003 | 0.0001 | 0.0002 | 0.0003 | 0.0001 | 0 | 0.0003 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0447 | 0.0136 | 0.0262 | 0.0109 | 0.0073 | 0.0128 | 0.0278 | 0.0039 | 0.0081 | 0.0153 | 0.0017 | 0.1171 | 0.0523 | 0.0036 | 0.0154 | 0.0033 | 0.0067 | 0.0487 |
Endosome | 0.0157 | 0.0023 | 0.0135 | 0.0269 | 0.0224 | 0.053 | 0.0135 | 0.0026 | 0.0078 | 0.01 | 0.0983 | 0.028 | 0.0111 | 0.0027 | 0.0072 | 0.0109 | 0.0172 | 0.0179 |
Golgi | 0.0034 | 0.0013 | 0.0028 | 0.0075 | 0.0017 | 0.0087 | 0.0033 | 0.0005 | 0.002 | 0.0012 | 0.0164 | 0.0201 | 0.0015 | 0.0004 | 0.0013 | 0.0003 | 0.005 | 0.0029 |
Lipid Particles | 0.0075 | 0.0012 | 0.0029 | 0.01 | 0.0023 | 0.0043 | 0.0096 | 0.0003 | 0.0036 | 0.0175 | 0.0015 | 0.0033 | 0.0031 | 0.0005 | 0.0006 | 0.0014 | 0.0033 | 0.0039 |
Mitochondria | 0.0099 | 0.0005 | 0.0041 | 0.0046 | 0.016 | 0.0055 | 0.0212 | 0.0004 | 0.0118 | 0.0358 | 0.0593 | 0.0138 | 0.0089 | 0.0009 | 0.0046 | 0.0018 | 0.0049 | 0.003 |
None | 0.0058 | 0.0002 | 0.0014 | 0.0011 | 0.0026 | 0.0021 | 0.0155 | 0.0009 | 0.0028 | 0.0042 | 0.0005 | 0.0331 | 0.0054 | 0.0003 | 0.0006 | 0.0096 | 0.0013 | 0.0171 |
Nuclear Periphery | 0.0281 | 0.0039 | 0.0109 | 0.0234 | 0.0085 | 0.0342 | 0.0281 | 0.0017 | 0.0136 | 0.0089 | 0.004 | 0.0044 | 0.0351 | 0.0106 | 0.0117 | 0.011 | 0.0109 | 0.0089 |
Nucleolus | 0.0084 | 0.0005 | 0.0026 | 0.0007 | 0.0075 | 0.0019 | 0.0048 | 0.0003 | 0.0018 | 0.0064 | 0.0004 | 0.0021 | 0.0037 | 0.0001 | 0.0005 | 0.0012 | 0.0011 | 0.0035 |
Nucleus | 0.0196 | 0.0023 | 0.0051 | 0.0072 | 0.008 | 0.0135 | 0.0116 | 0.0016 | 0.0048 | 0.0072 | 0.0035 | 0.0045 | 0.0129 | 0.0036 | 0.0047 | 0.0058 | 0.0064 | 0.0062 |
Peroxisomes | 0.0055 | 0 | 0.0004 | 0.0058 | 0.0004 | 0.0005 | 0.0029 | 0 | 0.0003 | 0.0042 | 0.001 | 0.0009 | 0.0003 | 0 | 0.0002 | 0.0002 | 0.0003 | 0.0003 |
Punctate Nuclear | 0.0017 | 0 | 0.0003 | 0.004 | 0.0002 | 0.007 | 0.0042 | 0.0001 | 0.0007 | 0.0003 | 0.0006 | 0.0219 | 0.0014 | 0.0001 | 0.0001 | 0.0003 | 0.0002 | 0.0597 |
Vacuole | 0.1485 | 0.0537 | 0.0767 | 0.1296 | 0.0939 | 0.1018 | 0.1148 | 0.0158 | 0.0686 | 0.1396 | 0.1187 | 0.0242 | 0.1285 | 0.0346 | 0.0969 | 0.147 | 0.1272 | 0.0081 |
Vacuole Periphery | 0.0407 | 0.0049 | 0.0172 | 0.0339 | 0.0516 | 0.0541 | 0.0327 | 0.0036 | 0.0111 | 0.0418 | 0.0312 | 0.0099 | 0.0479 | 0.0047 | 0.0286 | 0.0605 | 0.0766 | 0.0058 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 558.3492 | 443.6712 | 473.2583 | 628.8259 | 548.6886 | 469.4623 | 507.6739 | 473.0808 | 442.3831 | 565.6571 |
Translational Efficiency | 1.7952 | 2.7526 | 2.6602 | 1.2313 | 2.3588 | 2.4892 | 2.1505 | 2.4696 | 2.6621 | 2.4046 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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