Standard name | |
---|---|
Human Ortholog | |
Description | One of four subunits of the ESCRT-III complex; involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway; recruited from the cytoplasm to endosomal membranes; ESCRT-III stands for endosomal sorting complex required for transport III |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | – | – | 2 | – | – | 0 | 1 | 0 | – | 2 | 2 | 0 | – | – | – | 0 | – | – | – | 1 | 2 | – | 0 | 0 |
Bud | – | – | 3 | – | – | 0 | 0 | 0 | – | 1 | 0 | 0 | – | – | – | 0 | – | – | – | 0 | 1 | – | 0 | 0 |
Bud Neck | – | – | 0 | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – | – | 1 | 0 | – | 0 | 0 |
Bud Site | – | – | 0 | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | 0 | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – | – | 0 | 0 | – | 0 | 0 |
Cytoplasm | – | – | 0 | – | – | 3 | 2 | 3 | – | 0 | 1 | 2 | – | – | – | 2 | – | – | – | 0 | 0 | – | 0 | 0 |
Endoplasmic Reticulum | – | – | 0 | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – | – | 0 | 0 | – | 0 | 0 |
Endosome | – | – | 2 | – | – | 1 | 2 | 4 | – | 7 | 3 | 0 | – | – | – | 2 | – | – | – | 8 | 23 | – | 1 | 2 |
Golgi | – | – | 1 | – | – | 0 | 0 | 1 | – | 2 | 1 | 0 | – | – | – | 0 | – | – | – | 0 | 5 | – | 0 | 0 |
Mitochondria | – | – | 7 | – | – | 13 | 26 | 17 | – | 13 | 33 | 13 | – | – | – | 1 | – | – | – | 1 | 1 | – | 0 | 0 |
Nucleus | – | – | 0 | – | – | 0 | 1 | 0 | – | 0 | 0 | 0 | – | – | – | 1 | – | – | – | 0 | 0 | – | 0 | 0 |
Nuclear Periphery | – | – | 0 | – | – | 0 | 1 | 0 | – | 0 | 1 | 0 | – | – | – | 0 | – | – | – | 0 | 0 | – | 0 | 0 |
Nucleolus | – | – | 2 | – | – | 6 | 10 | 6 | – | 4 | 6 | 1 | – | – | – | 11 | – | – | – | 0 | 0 | – | 0 | 0 |
Peroxisomes | – | – | 8 | – | – | 0 | 2 | 1 | – | 3 | 3 | 1 | – | – | – | 0 | – | – | – | 2 | 12 | – | 0 | 0 |
SpindlePole | – | – | 7 | – | – | 1 | 2 | 1 | – | 2 | 1 | 2 | – | – | – | 4 | – | – | – | 1 | 1 | – | 0 | 0 |
Vac/Vac Membrane | – | – | 0 | – | – | 1 | 1 | 0 | – | 0 | 3 | 0 | – | – | – | 0 | – | – | – | 0 | 0 | – | 0 | 0 |
Unique Cell Count | 21 | 19 | 36 | 25 | 23 | 38 | 17 | 16 | 19 | 51 | 2 | 3 | ||||||||||||
Labelled Cell Count | 32 | 25 | 48 | 33 | 34 | 54 | 19 | 21 | 19 | 51 | 2 | 3 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | – | – | 9.8 | – | – | 10.7 | 10.6 | 11.1 | – | 12.8 | 12.4 | 11.6 | – | – | – | 15.9 | – | – | – | – | – |
Std Deviation (1e-4) | – | – | 5.0 | – | – | 2.7 | 2.8 | 3.2 | – | 3.6 | 3.5 | 3.5 | – | – | – | 5.5 | – | – | – | – | – |
Intensity Change (Log2) | – | – | – | – | – | 0.13 | 0.12 | 0.19 | – | 0.39 | 0.35 | 0.25 | – | – | – | 0.71 | – | – | – | – | – |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Bud | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Bud Neck | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Bud Site | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Cell Periphery | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Cytoplasm | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Endoplasmic Reticulum | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Endosome | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Golgi | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Mitochondria | – | – | 2.2 | 2.9 | 2.3 | – | 1.5 | 4.2 | 2.6 | – | – | – | 0 | – | – |
Nucleus | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Nuclear Periphery | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Nucleolus | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 3.7 | – | – |
Peroxisomes | – | – | 0 | 0 | 0 | – | -1.9 | 0 | 0 | – | – | – | 0 | – | – |
SpindlePole | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
Vacuole | – | – | 0 | 0 | 0 | – | 0 | 0 | 0 | – | – | – | 0 | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasmic Foci | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Eisosomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Lipid Particles | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
None | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Punctate Nuclear | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 10.683 | 24.5571 | 18.2224 | 31.8097 | 28.6914 | 32.0313 | 30.0025 | 38.6373 | 39.6077 | 29.0473 |
Translational Efficiency | 8.4673 | 3.1888 | 4.3129 | 2.7394 | 2.941 | 2.627 | 2.7394 | 2.1693 | 2.5197 | 2.9036 |
Dataset | Hit |
---|---|
Protein Concentration | – |
Protein Localization | – |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|