Standard name | |
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Human Ortholog | |
Description | Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase; forms a tetramer with Frs2p to generate active enzyme; able to hydrolyze mis-aminoacylated tRNA-Phe, which could contribute to translational quality control |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 3 | 6 | 1 | 2 | 6 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 4 | 2 | 0 | 2 | 5 | 13 | 17 | 9 | 7 | 1 | 10 | – | 1 | 6 | 10 | 5 | 8 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 86 | 131 | 59 | 46 | 63 | 104 | 144 | 192 | 102 | 35 | 35 | 63 | – | 44 | 106 | 367 | 254 | 312 | 97 | 122 | 62 | 16 | 36 | 52 |
Endoplasmic Reticulum | 0 | 1 | 4 | 0 | 1 | 5 | 19 | 31 | 7 | 3 | 2 | 4 | – | 0 | 0 | 11 | 13 | 18 | 1 | 0 | 3 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 1 | 0 | 0 | 0 | 0 | 0 | 4 | 1 | 1 | 0 | 0 | 0 | – | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 5 | 6 | – | 0 | 0 | 3 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 2 | – | 0 | 2 | 2 | 2 | 6 | 0 | 0 | 0 | 0 | 0 | 1 |
Unique Cell Count | 87 | 131 | 61 | 47 | 64 | 111 | 171 | 233 | 121 | 42 | 44 | 80 | 44 | 109 | 378 | 260 | 319 | 101 | 128 | 70 | 17 | 43 | 59 | |
Labelled Cell Count | 88 | 136 | 65 | 47 | 66 | 117 | 186 | 245 | 128 | 47 | 46 | 92 | 45 | 115 | 396 | 276 | 345 | 101 | 128 | 70 | 17 | 43 | 59 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 45.0 | 57.6 | 54.9 | 50.5 | 42.7 | 38.0 | 34.7 | 33.2 | 28.0 | 29.3 | 24.1 | 24.2 | – | 45.5 | 46.9 | 71.3 | 71.8 | 61.4 | – | 57.6 | 62.1 |
Std Deviation (1e-4) | 10.9 | 15.1 | 8.2 | 15.0 | 9.2 | 9.3 | 7.6 | 7.7 | 7.1 | 7.8 | 6.7 | 6.4 | – | 23.0 | 19.1 | 17.0 | 14.4 | 14.3 | – | 20.0 | 20.7 |
Intensity Change (Log2) | – | – | – | -0.12 | -0.36 | -0.53 | -0.66 | -0.73 | -0.97 | -0.91 | -1.19 | -1.18 | – | -0.27 | -0.23 | 0.38 | 0.39 | 0.16 | – | 0.07 | 0.18 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.9 | – | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.4 | 0.6 | -0.9 | -2.5 | -2.8 | -2.5 | -2.4 | -2.8 | -3.1 | – | 1.2 | 0.2 | 0.2 | 0.4 | 0.5 |
Endoplasmic Reticulum | 0 | 0 | 0 | 1.0 | 1.4 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 30.2524 | 49.5518 | 43.7623 | 43.6937 | 38.5222 | 44.6122 | 30.0184 | 43.9742 | 44.2713 | 40.5518 | 33.1801 | 46.1874 | 30.478 | 52.2519 | 43.1437 | 42.9229 | 47.1331 | 47.1094 |
Actin | 0.0193 | 0.0004 | 0.009 | 0.012 | 0.0014 | 0.001 | 0.0358 | 0.0023 | 0.0052 | 0.0011 | 0.0015 | 0.0041 | 0.0058 | 0.0009 | 0.0177 | 0.0001 | 0.034 | 0.0217 |
Bud | 0.002 | 0.0012 | 0.0014 | 0.0008 | 0.0042 | 0.0008 | 0.0019 | 0.0006 | 0.0028 | 0.0017 | 0.0202 | 0.0019 | 0.0008 | 0.0002 | 0.0021 | 0.002 | 0.001 | 0.0006 |
Bud Neck | 0.0024 | 0.0004 | 0.001 | 0.001 | 0.0007 | 0.0023 | 0.0007 | 0.0004 | 0.0006 | 0.0007 | 0.0008 | 0.0022 | 0.0003 | 0.0001 | 0.0008 | 0.0003 | 0.0007 | 0.0027 |
Bud Periphery | 0.0024 | 0.0007 | 0.0018 | 0.0006 | 0.0048 | 0.0007 | 0.0026 | 0.0014 | 0.0029 | 0.0011 | 0.0103 | 0.0021 | 0.0013 | 0 | 0.0048 | 0.001 | 0.001 | 0.0002 |
Bud Site | 0.0039 | 0.0009 | 0.0013 | 0.0003 | 0.0007 | 0.0001 | 0.0022 | 0.0035 | 0.0009 | 0.001 | 0.0033 | 0.0016 | 0.001 | 0.0003 | 0.0034 | 0.0002 | 0.0012 | 0.0002 |
Cell Periphery | 0.0058 | 0.0056 | 0.0108 | 0.0143 | 0.0014 | 0.0017 | 0.0018 | 0.0027 | 0.0007 | 0.003 | 0.0015 | 0.0004 | 0.0076 | 0.0003 | 0.0008 | 0.0002 | 0.0001 | 0.0003 |
Cytoplasm | 0.6564 | 0.9455 | 0.8349 | 0.7464 | 0.7612 | 0.863 | 0.6765 | 0.9723 | 0.903 | 0.7915 | 0.3689 | 0.9243 | 0.7146 | 0.9877 | 0.8689 | 0.8417 | 0.8706 | 0.9269 |
Cytoplasmic Foci | 0.021 | 0.0013 | 0.0087 | 0.0025 | 0.0104 | 0.0101 | 0.0091 | 0.0012 | 0.0034 | 0.0039 | 0.0109 | 0.0072 | 0.0469 | 0.0013 | 0.0108 | 0.0023 | 0.012 | 0.0061 |
Eisosomes | 0.0003 | 0 | 0.0002 | 0.0001 | 0 | 0 | 0.0003 | 0.0002 | 0 | 0 | 0 | 0 | 0.0003 | 0 | 0.0007 | 0 | 0.0002 | 0 |
Endoplasmic Reticulum | 0.0309 | 0.0164 | 0.0156 | 0.0288 | 0.013 | 0.0235 | 0.0271 | 0.0017 | 0.015 | 0.0034 | 0.2058 | 0.004 | 0.0291 | 0.0035 | 0.0057 | 0.0008 | 0.0009 | 0.0099 |
Endosome | 0.0297 | 0.0018 | 0.0149 | 0.0105 | 0.0365 | 0.0244 | 0.0208 | 0.0012 | 0.0178 | 0.0459 | 0.0509 | 0.0236 | 0.0389 | 0.0011 | 0.0199 | 0.0327 | 0.0182 | 0.0117 |
Golgi | 0.0072 | 0.0003 | 0.0042 | 0.0088 | 0.0037 | 0.0047 | 0.0045 | 0.0004 | 0.0036 | 0.0168 | 0.0038 | 0.0085 | 0.0051 | 0.0004 | 0.0022 | 0.0013 | 0.0172 | 0.0016 |
Lipid Particles | 0.008 | 0.0004 | 0.0037 | 0.0037 | 0.0009 | 0.001 | 0.0029 | 0.0002 | 0.0002 | 0.0009 | 0.0009 | 0.0007 | 0.0167 | 0.0001 | 0.0012 | 0.0001 | 0.0054 | 0.0002 |
Mitochondria | 0.0248 | 0.0005 | 0.015 | 0.0039 | 0.0423 | 0.016 | 0.0126 | 0.0059 | 0.016 | 0.0124 | 0.034 | 0.0027 | 0.0113 | 0.0001 | 0.0101 | 0.002 | 0.0243 | 0.0006 |
None | 0.0078 | 0.0003 | 0.0005 | 0.0002 | 0.0012 | 0.0008 | 0.006 | 0.0002 | 0.0003 | 0.0004 | 0.0014 | 0.0002 | 0.0129 | 0.0002 | 0.0021 | 0.0002 | 0.0004 | 0.0008 |
Nuclear Periphery | 0.0244 | 0.0025 | 0.0038 | 0.0064 | 0.0236 | 0.0028 | 0.0885 | 0.0006 | 0.0062 | 0.0063 | 0.0088 | 0.0018 | 0.0175 | 0.0007 | 0.0073 | 0.0018 | 0.0019 | 0.0015 |
Nucleolus | 0.0056 | 0.0001 | 0.0004 | 0.0001 | 0.001 | 0.0007 | 0.0006 | 0 | 0.0001 | 0.0008 | 0.0022 | 0.0001 | 0.0015 | 0 | 0.001 | 0.0001 | 0.0002 | 0 |
Nucleus | 0.0232 | 0.0016 | 0.0025 | 0.0026 | 0.0079 | 0.0022 | 0.046 | 0.0008 | 0.0023 | 0.008 | 0.0108 | 0.0017 | 0.0053 | 0.0007 | 0.0037 | 0.0017 | 0.0012 | 0.002 |
Peroxisomes | 0.0031 | 0 | 0.0008 | 0.0008 | 0.0011 | 0.0001 | 0.0018 | 0 | 0.0001 | 0.0001 | 0.002 | 0.0002 | 0.0014 | 0 | 0.0004 | 0.0001 | 0.0038 | 0.0005 |
Punctate Nuclear | 0.0139 | 0 | 0.0005 | 0.0001 | 0.0003 | 0.008 | 0.0062 | 0 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0216 | 0 | 0.0004 | 0 | 0.0009 | 0.0002 |
Vacuole | 0.093 | 0.0188 | 0.0623 | 0.1343 | 0.0613 | 0.0249 | 0.0393 | 0.0039 | 0.0125 | 0.0781 | 0.1754 | 0.0103 | 0.0466 | 0.0017 | 0.0248 | 0.0653 | 0.0033 | 0.0077 |
Vacuole Periphery | 0.0146 | 0.0013 | 0.0066 | 0.0217 | 0.0225 | 0.0111 | 0.0126 | 0.0005 | 0.006 | 0.0226 | 0.0866 | 0.0024 | 0.0135 | 0.0003 | 0.0111 | 0.0463 | 0.0016 | 0.0046 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 203.957 | 186.4626 | 187.8957 | 221.3541 | 204.8304 | 163.4454 | 180.0259 | 179.3874 | 173.3251 | 193.5075 |
Translational Efficiency | 1.3739 | 1.5343 | 1.4951 | 1.143 | 1.2044 | 1.5758 | 1.415 | 1.2349 | 1.2887 | 1.2335 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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