Standard name | |
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Human Ortholog | |
Description | Subunit of the heterohexameric Gim/prefoldin protein complex; involved in the folding of alpha-tubulin, beta-tubulin, and actin; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 2 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
Bud | 1 | 0 | 8 | 3 | 0 | 2 | – | 3 | 6 | 4 | 6 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 3 | 8 | 1 | 8 | 5 | 7 | – | 3 | 8 | 15 | 18 | 19 | 4 | 4 | 8 | 7 | 9 | 13 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 314 | 247 | 261 | 265 | 319 | 238 | – | 288 | 217 | 242 | 159 | 185 | 101 | 103 | 123 | 48 | 140 | 173 | 311 | 244 | 256 | 63 | 166 | 159 |
Endoplasmic Reticulum | 1 | 1 | 2 | 1 | 2 | 2 | – | 2 | 2 | 3 | 4 | 9 | 2 | 0 | 2 | 2 | 3 | 5 | 0 | 0 | 2 | 1 | 0 | 1 |
Endosome | 0 | 0 | 0 | 0 | 1 | 1 | – | 2 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 |
Golgi | 0 | 0 | 0 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 1 |
Mitochondria | 3 | 0 | 18 | 88 | 45 | 119 | – | 180 | 231 | 204 | 171 | 161 | 2 | 1 | 0 | 0 | 5 | 3 | 2 | 0 | 2 | 1 | 1 | 1 |
Nucleus | 0 | 2 | 1 | 0 | 0 | 0 | – | 2 | 0 | 2 | 2 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 1 | 0 | 0 | – | 4 | 1 | 1 | 0 | 3 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 1 | – | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 1 | 5 | 1 | 0 | 11 | 4 | – | 30 | 34 | 28 | 11 | 7 | 2 | 1 | 0 | 0 | 3 | 6 | 0 | 4 | 1 | 1 | 1 | 2 |
Unique Cell Count | 316 | 253 | 270 | 289 | 349 | 302 | 430 | 383 | 396 | 292 | 304 | 107 | 104 | 127 | 51 | 144 | 183 | 320 | 254 | 271 | 69 | 176 | 172 | |
Labelled Cell Count | 323 | 263 | 292 | 366 | 384 | 374 | 517 | 501 | 503 | 375 | 390 | 112 | 110 | 135 | 57 | 162 | 201 | 320 | 254 | 271 | 69 | 176 | 172 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 9.0 | 11.3 | 6.1 | 7.2 | 7.7 | 6.4 | – | 6.1 | 5.6 | 6.0 | 5.9 | 5.9 | 10.0 | 9.8 | 10.3 | 12.8 | 12.0 | 12.2 | 8.9 | 10.5 | 10.8 |
Std Deviation (1e-4) | 1.3 | 1.6 | 1.4 | 1.4 | 1.5 | 1.3 | – | 1.6 | 1.7 | 1.3 | 1.4 | 1.2 | 1.4 | 1.9 | 3.0 | 3.1 | 3.1 | 2.9 | 1.4 | 1.5 | 3.2 |
Intensity Change (Log2) | – | – | – | 0.23 | 0.33 | 0.07 | – | -0.0 | -0.11 | -0.02 | -0.04 | -0.06 | 0.72 | 0.68 | 0.75 | 1.06 | 0.98 | 1.0 | 0.54 | 0.78 | 0.82 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | -1.6 | 0 | 0 | – | 0 | -1.2 | 0 | -0.7 | -1.4 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | – | 0 | 0 | 2.8 | 3.8 | 3.8 | 0 | 0 | 0 | 0 | 0 | 4.1 |
Cytoplasm | -2.5 | -2.7 | -6.4 | – | -9.3 | -11.4 | -10.5 | -11.5 | -10.3 | -1.0 | 1.3 | 0.1 | -0.9 | 0.3 | -1.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 1.9 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 7.2 | 2.5 | 9.2 | – | 10.1 | 13.9 | 12.1 | 13.0 | 12.0 | -1.9 | -2.3 | -3.0 | 0 | -1.4 | -2.5 |
Nucleus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 2.5 | 0 | – | 4.1 | 4.8 | 4.2 | 2.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.5786 | 6.2885 | 5.7085 | 5.3439 | 4.7483 | 6.0572 | 5.0218 | 5.6122 | 5.5541 | 4.497 | 5.0328 | 5.5667 | 5.4931 | 7.8897 | 7.1173 | 6.9992 | 6.5514 | 7.4306 |
Actin | 0.0994 | 0.0002 | 0.0014 | 0.0137 | 0.0328 | 0.0003 | 0.067 | 0.0003 | 0.0033 | 0.0237 | 0.0266 | 0.0113 | 0.0079 | 0.0008 | 0.0003 | 0.0002 | 0.0001 | 0.002 |
Bud | 0.0012 | 0.001 | 0.0017 | 0.0006 | 0.0013 | 0.0001 | 0.0014 | 0.0005 | 0.0013 | 0.0031 | 0.0005 | 0.0008 | 0.0003 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 |
Bud Neck | 0.0096 | 0.0002 | 0.0008 | 0.0121 | 0.0009 | 0.0006 | 0.0322 | 0.0002 | 0.0009 | 0.0027 | 0.0005 | 0.0033 | 0.0027 | 0.0001 | 0.0002 | 0.0003 | 0.0002 | 0.0073 |
Bud Periphery | 0.0015 | 0.0009 | 0.0006 | 0.0006 | 0.0016 | 0 | 0.0015 | 0.0001 | 0.0006 | 0.0054 | 0.0003 | 0.0008 | 0.0002 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0.0062 | 0.0009 | 0.0022 | 0.0063 | 0.0033 | 0 | 0.0053 | 0.0066 | 0.0118 | 0.0128 | 0.0007 | 0.0037 | 0.0013 | 0.0003 | 0.0003 | 0.0001 | 0 | 0.0002 |
Cell Periphery | 0.0007 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0003 | 0.0001 | 0.0002 | 0.0007 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.4043 | 0.96 | 0.9284 | 0.8448 | 0.7492 | 0.9667 | 0.4274 | 0.9692 | 0.9179 | 0.8128 | 0.8788 | 0.9005 | 0.772 | 0.9752 | 0.9709 | 0.9731 | 0.9878 | 0.9734 |
Cytoplasmic Foci | 0.1236 | 0.0058 | 0.0164 | 0.0255 | 0.0256 | 0.0078 | 0.0612 | 0.0052 | 0.0186 | 0.0345 | 0.0224 | 0.0168 | 0.0943 | 0.0036 | 0.0059 | 0.007 | 0.0027 | 0.0069 |
Eisosomes | 0.0014 | 0 | 0 | 0.0002 | 0.0001 | 0 | 0.0004 | 0 | 0 | 0.0011 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0102 | 0.0024 | 0.0023 | 0.0035 | 0.0021 | 0.003 | 0.0214 | 0.0014 | 0.0019 | 0.0029 | 0.0019 | 0.0087 | 0.0127 | 0.0062 | 0.0037 | 0.0015 | 0.0009 | 0.0017 |
Endosome | 0.0979 | 0.0059 | 0.0145 | 0.0306 | 0.0458 | 0.0072 | 0.0944 | 0.0036 | 0.0189 | 0.0292 | 0.0333 | 0.0194 | 0.0499 | 0.0019 | 0.0063 | 0.0082 | 0.0026 | 0.0032 |
Golgi | 0.0278 | 0.0004 | 0.0025 | 0.007 | 0.0215 | 0.0004 | 0.0207 | 0.0003 | 0.0055 | 0.0029 | 0.0091 | 0.0105 | 0.0057 | 0.0003 | 0.0004 | 0.0004 | 0.0001 | 0.0003 |
Lipid Particles | 0.0282 | 0 | 0.0005 | 0.0094 | 0.0235 | 0 | 0.0386 | 0 | 0.0007 | 0.0015 | 0.0042 | 0.001 | 0.0043 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0.0205 | 0.0002 | 0.0011 | 0.01 | 0.0236 | 0.0004 | 0.0114 | 0.0001 | 0.0011 | 0.0283 | 0.002 | 0.0122 | 0.0009 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 |
None | 0.0285 | 0.0179 | 0.0168 | 0.0094 | 0.0032 | 0.0102 | 0.017 | 0.0097 | 0.0107 | 0.0063 | 0.006 | 0.0038 | 0.0188 | 0.0094 | 0.0079 | 0.003 | 0.0026 | 0.0025 |
Nuclear Periphery | 0.0177 | 0.0005 | 0.0008 | 0.0017 | 0.0289 | 0.0005 | 0.0385 | 0.0004 | 0.0004 | 0.0019 | 0.0004 | 0.0009 | 0.0041 | 0.0004 | 0.0006 | 0.0006 | 0.0004 | 0.0003 |
Nucleolus | 0.0024 | 0 | 0.0002 | 0.001 | 0.0008 | 0 | 0.0013 | 0 | 0.0001 | 0.0002 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0.0178 | 0.0012 | 0.0027 | 0.0027 | 0.0058 | 0.0014 | 0.1069 | 0.001 | 0.0008 | 0.0016 | 0.0008 | 0.0012 | 0.0036 | 0.0007 | 0.001 | 0.0011 | 0.0009 | 0.0009 |
Peroxisomes | 0.0567 | 0.0001 | 0.0025 | 0.0082 | 0.0196 | 0.0001 | 0.0307 | 0.0001 | 0.0028 | 0.0081 | 0.0062 | 0.0028 | 0.0112 | 0 | 0 | 0 | 0 | 0.0005 |
Punctate Nuclear | 0.0308 | 0.0002 | 0.0011 | 0.0044 | 0.0039 | 0.0002 | 0.0111 | 0.0002 | 0.0002 | 0.0025 | 0.0005 | 0.0004 | 0.0043 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0002 |
Vacuole | 0.0088 | 0.0019 | 0.0028 | 0.0058 | 0.0036 | 0.0008 | 0.0074 | 0.001 | 0.002 | 0.0129 | 0.0045 | 0.0012 | 0.0046 | 0.0006 | 0.0016 | 0.0032 | 0.0011 | 0.0004 |
Vacuole Periphery | 0.0046 | 0.0003 | 0.0006 | 0.0023 | 0.0025 | 0.0003 | 0.0037 | 0.0001 | 0.0004 | 0.0049 | 0.0013 | 0.0004 | 0.0007 | 0.0001 | 0.0003 | 0.0006 | 0.0003 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 35.181 | 20.0134 | 25.4586 | 49.9966 | 35.247 | 35.1615 | 41.1938 | 46.8262 | 49.395 | 46.5899 |
Translational Efficiency | 4.5516 | 6.4081 | 5.4584 | 1.8349 | 3.6841 | 4.2884 | 2.8606 | 2.5051 | 2.5804 | 2.8851 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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