ORF | |
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Human Ortholog | |
Description | Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; not an essential gene; induced by treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from nucleus to vacuole upon DNA replication stress; YLR297W has a paralog, YOR186W, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 |
Bud | 0 | 2 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 3 | 1 | 4 | 3 | 1 | 1 | 0 | 0 | 0 | 6 | 7 | 0 | 2 | 9 | 7 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 231 | 239 | 41 | 122 | 107 | 114 | 193 | 191 | 147 | 201 | 178 | 235 | 208 | 304 | 342 | 20 | 20 | 18 | 104 | 52 | 16 | 17 | 64 | 66 |
Endoplasmic Reticulum | 2 | 3 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 4 | 0 | 2 | 1 | 3 | 9 | 11 | 1 | 1 | 0 | 0 | 2 | 2 |
Endosome | 3 | 5 | 0 | 0 | 14 | 1 | 2 | 1 | 0 | 2 | 0 | 0 | 19 | 35 | 18 | 3 | 14 | 3 | 13 | 11 | 0 | 7 | 7 | 15 |
Golgi | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 4 | 6 | 2 | 1 | 0 | 1 | 1 | 3 |
Mitochondria | 25 | 17 | 8 | 34 | 12 | 32 | 66 | 62 | 56 | 56 | 49 | 78 | 4 | 2 | 2 | 4 | 11 | 2 | 10 | 7 | 2 | 4 | 9 | 10 |
Nucleus | 2 | 17 | 1 | 0 | 1 | 10 | 47 | 57 | 32 | 32 | 28 | 26 | 1 | 3 | 1 | 29 | 27 | 29 | 1 | 2 | 0 | 1 | 3 | 4 |
Nuclear Periphery | 1 | 3 | 0 | 1 | 0 | 0 | 1 | 5 | 5 | 3 | 4 | 11 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 3 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 4 | 2 | 0 | 1 | 0 | 3 | 2 | 0 | 2 | 4 | 4 |
Vac/Vac Membrane | 79 | 161 | 5 | 20 | 78 | 98 | 138 | 179 | 104 | 116 | 98 | 147 | 54 | 55 | 43 | 94 | 111 | 75 | 205 | 316 | 55 | 70 | 176 | 192 |
Unique Cell Count | 321 | 386 | 52 | 147 | 177 | 193 | 343 | 386 | 253 | 326 | 282 | 385 | 270 | 376 | 390 | 139 | 156 | 113 | 357 | 408 | 81 | 111 | 289 | 319 |
Labelled Cell Count | 344 | 450 | 57 | 178 | 215 | 256 | 449 | 498 | 345 | 416 | 361 | 506 | 291 | 409 | 412 | 156 | 202 | 145 | 357 | 408 | 81 | 111 | 289 | 319 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.0 | 4.6 | 4.0 | 3.6 | 5.1 | 4.4 | 4.2 | 4.5 | 4.1 | 4.6 | 4.6 | 4.7 | 4.7 | 4.9 | 4.9 | 10.5 | 9.5 | 9.0 | 4.3 | 5.4 | 5.4 |
Std Deviation (1e-4) | 0.7 | 0.8 | 2.4 | 2.0 | 3.1 | 2.4 | 1.5 | 1.5 | 1.4 | 1.7 | 1.8 | 2.2 | 1.7 | 1.8 | 2.0 | 3.4 | 2.8 | 2.7 | 1.1 | 2.7 | 2.4 |
Intensity Change (Log2) | – | – | – | -0.15 | 0.36 | 0.15 | 0.07 | 0.17 | 0.04 | 0.21 | 0.2 | 0.23 | 0.25 | 0.3 | 0.29 | 1.41 | 1.26 | 1.18 | 0.1 | 0.43 | 0.44 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | 7.1 | 7.7 | 6.8 |
R1 | R2 | R3 | ||||||||||||||||
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G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -0.7242 | 0.1166 | -0.1216 | -0.1789 | -0.4124 | 0.2827 | -1.3587 | -0.6916 | -0.9631 | -0.888 | -0.988 | -0.7228 | 1.0133 | 1.236 | 0.8849 | 1.0251 | 0.9458 | 0.9445 |
Actin | 0.0059 | 0.0002 | 0.0267 | 0.0025 | 0.0091 | 0.0066 | 0.0251 | 0.0003 | 0.0011 | 0.0297 | 0.0004 | 0.0028 | 0.05 | 0.0001 | 0.0127 | 0.0213 | 0.008 | 0 |
Bud | 0.0004 | 0.0003 | 0.0009 | 0.0004 | 0.0008 | 0.0005 | 0.0007 | 0.0023 | 0.0006 | 0.01 | 0.0003 | 0.0007 | 0.0015 | 0.0007 | 0.0009 | 0.0007 | 0.0005 | 0.0002 |
Bud Neck | 0.0005 | 0.0009 | 0.0007 | 0.0072 | 0.0017 | 0.0017 | 0.0007 | 0.0049 | 0.0007 | 0.008 | 0.0005 | 0.0019 | 0.0153 | 0.0005 | 0.0031 | 0.0004 | 0.0006 | 0.0023 |
Bud Periphery | 0.0012 | 0.0003 | 0.0013 | 0.0005 | 0.0012 | 0.0008 | 0.001 | 0.0031 | 0.0012 | 0.0362 | 0.0004 | 0.0011 | 0.0021 | 0.0007 | 0.0018 | 0.0011 | 0.0008 | 0.0004 |
Bud Site | 0.0022 | 0.0014 | 0.008 | 0.0013 | 0.0037 | 0.0008 | 0.0047 | 0.0207 | 0.0024 | 0.0096 | 0.0008 | 0.0018 | 0.0143 | 0.0088 | 0.0099 | 0.0011 | 0.0026 | 0.0009 |
Cell Periphery | 0.0008 | 0.0006 | 0.0006 | 0.0003 | 0.0011 | 0.0006 | 0.0005 | 0.001 | 0.0004 | 0.0017 | 0.0002 | 0.0004 | 0.0011 | 0.0007 | 0.0006 | 0.0002 | 0.0009 | 0.0014 |
Cytoplasm | 0.1054 | 0.1289 | 0.1093 | 0.13 | 0.0512 | 0.1165 | 0.0923 | 0.1525 | 0.1181 | 0.1026 | 0.0959 | 0.1746 | 0.1185 | 0.1639 | 0.1185 | 0.0942 | 0.1371 | 0.0873 |
Cytoplasmic Foci | 0.067 | 0.0749 | 0.052 | 0.0735 | 0.1204 | 0.0626 | 0.0665 | 0.0667 | 0.06 | 0.0581 | 0.0685 | 0.103 | 0.0684 | 0.0449 | 0.0593 | 0.0368 | 0.0551 | 0.0489 |
Eisosomes | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0003 | 0.0002 | 0 | 0.0001 | 0.0006 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0 |
Endoplasmic Reticulum | 0.0084 | 0.0057 | 0.0078 | 0.0028 | 0.0023 | 0.0035 | 0.0039 | 0.0033 | 0.0043 | 0.0033 | 0.0022 | 0.0042 | 0.008 | 0.0067 | 0.0053 | 0.0018 | 0.0025 | 0.003 |
Endosome | 0.1651 | 0.1668 | 0.1986 | 0.1917 | 0.3143 | 0.17 | 0.2377 | 0.1399 | 0.1765 | 0.2592 | 0.3524 | 0.2389 | 0.1989 | 0.1594 | 0.1717 | 0.2585 | 0.286 | 0.3222 |
Golgi | 0.0055 | 0.0046 | 0.0085 | 0.0309 | 0.0106 | 0.0112 | 0.0125 | 0.0019 | 0.0056 | 0.0146 | 0.0102 | 0.0053 | 0.0076 | 0.0018 | 0.0061 | 0.0058 | 0.0048 | 0.0038 |
Lipid Particles | 0.0236 | 0.0135 | 0.0166 | 0.0292 | 0.0525 | 0.0096 | 0.0196 | 0.0092 | 0.0141 | 0.0155 | 0.0041 | 0.0125 | 0.0183 | 0.0098 | 0.0065 | 0.0081 | 0.0156 | 0.0337 |
Mitochondria | 0.0217 | 0.0019 | 0.0206 | 0.024 | 0.0104 | 0.0191 | 0.017 | 0.0029 | 0.028 | 0.0204 | 0.0243 | 0.0039 | 0.0052 | 0.0023 | 0.0058 | 0.0164 | 0.0051 | 0.0011 |
None | 0.421 | 0.389 | 0.3282 | 0.2668 | 0.0428 | 0.2742 | 0.3825 | 0.4035 | 0.4539 | 0.2782 | 0.2513 | 0.2672 | 0.3503 | 0.3583 | 0.3867 | 0.314 | 0.2376 | 0.1067 |
Nuclear Periphery | 0.0058 | 0.0061 | 0.0136 | 0.0023 | 0.0086 | 0.0034 | 0.0052 | 0.004 | 0.0083 | 0.0032 | 0.0404 | 0.0035 | 0.0108 | 0.0059 | 0.0055 | 0.0026 | 0.0055 | 0.0021 |
Nucleolus | 0.0022 | 0.0015 | 0.0012 | 0.0015 | 0.0027 | 0.0015 | 0.0017 | 0.0028 | 0.0022 | 0.0011 | 0.0008 | 0.0018 | 0.0015 | 0.0025 | 0.0012 | 0.0011 | 0.0028 | 0.0037 |
Nucleus | 0.0036 | 0.0034 | 0.0036 | 0.0036 | 0.0105 | 0.0032 | 0.0068 | 0.0071 | 0.0057 | 0.0025 | 0.0039 | 0.0057 | 0.0059 | 0.0039 | 0.0052 | 0.0022 | 0.008 | 0.0044 |
Peroxisomes | 0.0111 | 0.0013 | 0.0032 | 0.0366 | 0.0159 | 0.0021 | 0.0082 | 0.0016 | 0.0119 | 0.0025 | 0.0011 | 0.0037 | 0.0112 | 0.0011 | 0.0122 | 0.0059 | 0.0085 | 0.0024 |
Punctate Nuclear | 0.0091 | 0.0014 | 0.001 | 0.0024 | 0.0214 | 0.0013 | 0.004 | 0.0021 | 0.0014 | 0.0006 | 0.001 | 0.0024 | 0.0049 | 0.0009 | 0.005 | 0.0007 | 0.02 | 0.0006 |
Vacuole | 0.1261 | 0.1861 | 0.1744 | 0.1706 | 0.294 | 0.277 | 0.0988 | 0.1603 | 0.0914 | 0.1131 | 0.1279 | 0.1529 | 0.0935 | 0.2079 | 0.1601 | 0.1966 | 0.1739 | 0.3453 |
Vacuole Periphery | 0.0132 | 0.0113 | 0.0229 | 0.022 | 0.0249 | 0.0336 | 0.0104 | 0.0099 | 0.0121 | 0.0295 | 0.0135 | 0.0115 | 0.0122 | 0.0192 | 0.0217 | 0.0303 | 0.0239 | 0.0297 |
R1 | R2 | |||||||||
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G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | – | – | – | – | – | – | – | – | – | – |
Translational Efficiency | – | – | – | – | – | – | – | – | – | – |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | – |
Translational Efficiency | – |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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