Standard name | |
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Human Ortholog | |
Description | Protein involved in vesicular transport; mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 8 | 0 | 11 | 15 | 28 | 12 | 14 | 40 | 16 | 19 | 21 | 25 | 3 | 3 | 0 | 2 | 4 | 5 | 1 | 0 | 6 | 0 | 2 | 2 |
Bud | 0 | 4 | 1 | 4 | 5 | 9 | 13 | 24 | 26 | 17 | 28 | 27 | 2 | 0 | 0 | 1 | 2 | 0 | 1 | 0 | 2 | 0 | 1 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 4 | 1 | 3 | 4 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 4 | 1 | 11 | 11 | 8 | 14 | 16 | 15 | 21 | 13 | 24 | 20 | 7 | 4 | 2 | 11 | 18 | 11 | 1 | 0 | 1 | 0 | 0 | 0 |
Cytoplasm | 177 | 135 | 245 | 199 | 287 | 276 | 260 | 294 | 198 | 233 | 243 | 234 | 147 | 187 | 236 | 186 | 452 | 187 | 185 | 140 | 236 | 181 | 326 | 310 |
Endoplasmic Reticulum | 19 | 7 | 25 | 19 | 33 | 23 | 22 | 42 | 21 | 27 | 28 | 24 | 16 | 17 | 9 | 12 | 23 | 7 | 11 | 4 | 42 | 23 | 53 | 53 |
Endosome | 1 | 0 | 10 | 16 | 41 | 55 | 59 | 87 | 50 | 55 | 43 | 45 | 0 | 1 | 2 | 5 | 16 | 6 | 6 | 1 | 12 | 1 | 8 | 13 |
Golgi | 0 | 0 | 2 | 9 | 30 | 13 | 5 | 9 | 2 | 6 | 9 | 3 | 0 | 0 | 0 | 0 | 3 | 0 | 3 | 1 | 10 | 3 | 9 | 16 |
Mitochondria | 2 | 11 | 13 | 29 | 44 | 145 | 208 | 293 | 274 | 334 | 311 | 433 | 0 | 0 | 0 | 13 | 41 | 13 | 10 | 4 | 31 | 20 | 29 | 26 |
Nucleus | 1 | 0 | 1 | 2 | 1 | 0 | 4 | 7 | 1 | 2 | 2 | 0 | 2 | 1 | 1 | 1 | 4 | 3 | 0 | 1 | 0 | 1 | 0 | 0 |
Nuclear Periphery | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 1 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 4 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 0 | 2 | 3 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
SpindlePole | 1 | 0 | 0 | 0 | 1 | 0 | 4 | 10 | 3 | 2 | 2 | 3 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 1 |
Vac/Vac Membrane | 2 | 0 | 9 | 12 | 22 | 21 | 42 | 52 | 27 | 55 | 26 | 33 | 0 | 2 | 3 | 6 | 36 | 9 | 3 | 8 | 7 | 14 | 27 | 25 |
Unique Cell Count | 204 | 145 | 307 | 268 | 443 | 475 | 558 | 737 | 507 | 641 | 585 | 695 | 162 | 207 | 249 | 207 | 525 | 212 | 235 | 166 | 364 | 251 | 473 | 464 |
Labelled Cell Count | 215 | 159 | 328 | 316 | 501 | 571 | 651 | 876 | 642 | 775 | 744 | 855 | 177 | 215 | 253 | 237 | 600 | 241 | 235 | 166 | 364 | 251 | 473 | 464 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 8.0 | 7.0 | 8.5 | 9.0 | 8.5 | 7.4 | 6.6 | 6.9 | 6.5 | 6.2 | 6.4 | 5.9 | 8.9 | 9.0 | 8.9 | 6.6 | 7.9 | 9.3 | 9.9 | 10.1 | 10.2 |
Std Deviation (1e-4) | 1.2 | 1.0 | 1.3 | 1.6 | 1.4 | 1.4 | 1.4 | 1.4 | 1.5 | 1.3 | 1.5 | 1.2 | 0.9 | 1.0 | 1.0 | 1.1 | 1.4 | 1.4 | 1.2 | 1.4 | 1.5 |
Intensity Change (Log2) | – | – | – | 0.08 | -0.0 | -0.19 | -0.37 | -0.3 | -0.4 | -0.45 | -0.42 | -0.52 | 0.07 | 0.09 | 0.06 | -0.36 | -0.11 | 0.12 | 0.21 | 0.24 | 0.26 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 1.2 | 1.7 | -0.9 | -0.9 | 1.3 | -0.3 | -0.5 | 0 | 0 | 0 | -1.5 | 0 | -1.9 | -3.0 | -0.8 |
Bud | 0 | 0 | 0 | 0 | 2.8 | 3.7 | 2.5 | 3.6 | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0.3 | -1.5 | -0.5 | -0.6 | -1.5 | 0.4 | -1.4 | 0.4 | -0.6 | 0.4 | -1.1 | -2.2 | 1.0 | -0.1 | 0.9 |
Cytoplasm | -1.6 | -4.5 | -6.3 | -9.5 | -11.8 | -11.3 | -12.5 | -10.9 | -13.5 | 3.0 | 3.2 | 5.1 | 3.0 | 2.4 | 2.5 |
Endoplasmic Reticulum | -0.5 | -0.3 | -1.9 | -2.6 | -1.5 | -2.4 | -2.5 | -2.0 | -3.2 | 0.6 | 0 | -2.2 | -1.0 | -2.2 | -2.3 |
Endosome | 1.6 | 3.2 | 4.1 | 3.8 | 4.3 | 3.5 | 3.0 | 2.5 | 2.1 | 0 | 0 | -2.0 | -0.6 | -0.2 | -0.3 |
Golgi | 2.4 | 4.1 | 2.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 3.0 | 2.9 | 8.9 | 10.7 | 11.5 | 14.4 | 14.3 | 14.4 | 17.1 | 0 | -3.0 | -3.3 | 1.0 | 2.0 | 1.0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 1.0 | 1.4 | 1.1 | 2.7 | 2.6 | 1.6 | 3.2 | 1.1 | 1.3 | 0 | 0 | -1.4 | 0 | 2.4 | 0.8 |
R1 | R2 | R3 | ||||||||||||||||
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G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.797 | 6.6139 | 5.996 | 5.136 | 5.9489 | 5.8242 | 3.7455 | 5.0339 | 4.4487 | 4.1486 | 4.0277 | 4.5397 | 2.9027 | 4.6776 | 4.214 | 4.2018 | 3.0202 | 4.1813 |
Actin | 0.0146 | 0.0082 | 0.0058 | 0.0262 | 0.0008 | 0.003 | 0.0018 | 0.0021 | 0.0253 | 0.0136 | 0.0437 | 0.0028 | 0.0381 | 0.0576 | 0.0178 | 0.0031 | 0.0113 | 0.0014 |
Bud | 0.0009 | 0.0009 | 0.0009 | 0.0012 | 0.0005 | 0.0005 | 0.0002 | 0.0005 | 0.0009 | 0.0008 | 0.0004 | 0.0003 | 0.0012 | 0.0015 | 0.0011 | 0.0016 | 0.0009 | 0.0003 |
Bud Neck | 0.0011 | 0.0008 | 0.0006 | 0.0036 | 0.0005 | 0.002 | 0.0002 | 0.0002 | 0.0011 | 0.0004 | 0.0006 | 0.0009 | 0.0008 | 0.0004 | 0.001 | 0.0005 | 0.0007 | 0.0011 |
Bud Periphery | 0.0006 | 0.0003 | 0.0004 | 0.0009 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0.0009 | 0.0005 | 0.0004 | 0.0006 | 0.0008 | 0.0002 |
Bud Site | 0.0048 | 0.0074 | 0.0028 | 0.0057 | 0.0004 | 0.0003 | 0.0022 | 0.0017 | 0.0041 | 0.0006 | 0.001 | 0.0002 | 0.001 | 0.0116 | 0.0037 | 0.0015 | 0.0011 | 0.0002 |
Cell Periphery | 0.0005 | 0.0003 | 0.0003 | 0.0006 | 0 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0004 | 0.0001 | 0.0001 | 0.0001 |
Cytoplasm | 0.5209 | 0.6801 | 0.6169 | 0.509 | 0.4695 | 0.5796 | 0.7542 | 0.6752 | 0.6398 | 0.5718 | 0.5161 | 0.6286 | 0.5044 | 0.774 | 0.5828 | 0.4583 | 0.4033 | 0.6757 |
Cytoplasmic Foci | 0.0842 | 0.0795 | 0.0799 | 0.06 | 0.1329 | 0.0878 | 0.0446 | 0.0326 | 0.0909 | 0.0623 | 0.1093 | 0.0933 | 0.0445 | 0.079 | 0.0745 | 0.1035 | 0.1132 | 0.0622 |
Eisosomes | 0.0003 | 0 | 0.0001 | 0.0007 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0201 | 0.009 | 0.0089 | 0.0092 | 0.0074 | 0.013 | 0.0275 | 0.0078 | 0.0097 | 0.0028 | 0.0107 | 0.0102 | 0.0131 | 0.0022 | 0.0077 | 0.008 | 0.0034 | 0.0149 |
Endosome | 0.2718 | 0.1624 | 0.2219 | 0.2873 | 0.3253 | 0.238 | 0.1345 | 0.1151 | 0.1601 | 0.2587 | 0.2207 | 0.211 | 0.1537 | 0.0404 | 0.2201 | 0.3266 | 0.3127 | 0.1655 |
Golgi | 0.0439 | 0.0256 | 0.0337 | 0.0355 | 0.0429 | 0.0413 | 0.0066 | 0.0287 | 0.0382 | 0.0665 | 0.0643 | 0.0392 | 0.0702 | 0.0106 | 0.0497 | 0.0417 | 0.054 | 0.0286 |
Lipid Particles | 0.0019 | 0.0031 | 0.0005 | 0.0011 | 0.0003 | 0.0005 | 0.0012 | 0.0003 | 0.0014 | 0.0001 | 0.0074 | 0.0002 | 0.0029 | 0.0018 | 0.0029 | 0.0005 | 0.0232 | 0.005 |
Mitochondria | 0.0083 | 0.005 | 0.0077 | 0.0145 | 0.005 | 0.022 | 0.0013 | 0.0059 | 0.0029 | 0.0019 | 0.0057 | 0.0049 | 0.0256 | 0.0018 | 0.0065 | 0.0151 | 0.0162 | 0.0195 |
None | 0.0049 | 0.002 | 0.0021 | 0.001 | 0.0009 | 0.0012 | 0.0069 | 0.1198 | 0.0021 | 0.0009 | 0.0015 | 0.001 | 0.0294 | 0.0023 | 0.0154 | 0.001 | 0.0007 | 0.0014 |
Nuclear Periphery | 0.003 | 0.0009 | 0.0013 | 0.0019 | 0.0007 | 0.0012 | 0.0038 | 0.0008 | 0.0012 | 0.0007 | 0.0014 | 0.0005 | 0.0449 | 0.0007 | 0.0015 | 0.0018 | 0.0026 | 0.001 |
Nucleolus | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0008 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 |
Nucleus | 0.0012 | 0.001 | 0.0009 | 0.0011 | 0.0004 | 0.0006 | 0.0012 | 0.0005 | 0.0007 | 0.0005 | 0.0006 | 0.0004 | 0.0114 | 0.0007 | 0.0008 | 0.0008 | 0.0009 | 0.0006 |
Peroxisomes | 0.0017 | 0.0017 | 0.001 | 0.0018 | 0.0017 | 0.0007 | 0.0003 | 0.0001 | 0.0094 | 0.0006 | 0.0073 | 0.001 | 0.0026 | 0.0087 | 0.0021 | 0.0058 | 0.0338 | 0.0155 |
Punctate Nuclear | 0.0005 | 0.0003 | 0.0004 | 0.0002 | 0.0002 | 0.0002 | 0.0006 | 0.0002 | 0.0004 | 0.0001 | 0.0015 | 0.0002 | 0.0471 | 0.0006 | 0.0004 | 0.0004 | 0.001 | 0.0005 |
Vacuole | 0.0109 | 0.0085 | 0.0094 | 0.0302 | 0.0064 | 0.0045 | 0.0107 | 0.006 | 0.0084 | 0.0118 | 0.0039 | 0.0032 | 0.004 | 0.0044 | 0.0085 | 0.0201 | 0.0141 | 0.0036 |
Vacuole Periphery | 0.0041 | 0.0028 | 0.0045 | 0.0084 | 0.0039 | 0.0033 | 0.0019 | 0.002 | 0.0029 | 0.0057 | 0.0034 | 0.0021 | 0.0032 | 0.0011 | 0.0028 | 0.0088 | 0.0057 | 0.0025 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 15.7284 | 18.0259 | 19.5289 | 26.7574 | 20.9154 | 14.5104 | 20.4131 | 24.9716 | 25.4921 | 23.6279 |
Translational Efficiency | 1.7606 | 1.7783 | 1.4653 | 1.3253 | 1.0819 | 1.8205 | 1.344 | 1.1094 | 1.0691 | 1.0167 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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