Standard name | |
---|---|
Human Ortholog | |
Description | Mitochondrial hsp70-type molecular chaperone; required for assembly of iron/sulfur clusters into proteins at a step after cluster synthesis, and for maturation of Yfh1p, which is a homolog of human frataxin implicated in Friedreich's ataxia |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 2 | 2 | 0 | 8 | 8 | 0 | 1 | 2 | 0 | 2 | 2 | 1 | 7 | 14 | 10 | 0 | 1 | 6 | 5 | 6 | 1 | 4 | 12 | 21 |
Bud | 6 | 2 | 1 | 3 | 3 | 4 | 10 | 14 | 9 | 10 | 10 | 10 | 1 | 2 | 1 | 3 | 4 | 9 | 0 | 2 | 0 | 1 | 6 | 4 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
Bud Site | 0 | 1 | 0 | 0 | 0 | 2 | 1 | 5 | 1 | 4 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | – | – | – | – | – | – |
Cell Periphery | 6 | 20 | 1 | 8 | 15 | 2 | 8 | 7 | 6 | 14 | 6 | 9 | 17 | 27 | 38 | 20 | 16 | 20 | 1 | 0 | 0 | 0 | 0 | 4 |
Cytoplasm | 4 | 0 | 2 | 5 | 11 | 7 | 10 | 10 | 3 | 8 | 7 | 4 | 6 | 27 | 21 | 12 | 17 | 6 | 1 | 1 | 0 | 1 | 3 | 2 |
Endoplasmic Reticulum | 8 | 7 | 0 | 0 | 3 | 1 | 1 | 7 | 2 | 5 | 2 | 4 | 7 | 6 | 11 | 6 | 6 | 2 | 0 | 0 | 0 | 0 | 3 | 8 |
Endosome | 4 | 8 | 0 | 6 | 39 | 16 | 27 | 41 | 4 | 12 | 6 | 10 | 8 | 12 | 17 | 15 | 11 | 17 | 10 | 14 | 1 | 6 | 23 | 32 |
Golgi | 3 | 49 | 9 | 44 | 85 | 4 | 9 | 7 | 7 | 12 | 5 | 7 | 114 | 182 | 293 | 90 | 58 | 43 | 8 | 24 | 1 | 14 | 47 | 72 |
Mitochondria | 286 | 254 | 34 | 217 | 293 | 306 | 462 | 426 | 348 | 480 | 482 | 504 | 209 | 364 | 343 | 18 | 23 | 13 | 267 | 275 | 66 | 159 | 411 | 529 |
Nucleus | 1 | 1 | 0 | 0 | 1 | 3 | 6 | 4 | 3 | 4 | 4 | 2 | 0 | 2 | 1 | 5 | 8 | 4 | 0 | 0 | 0 | 2 | 3 | 0 |
Nuclear Periphery | 20 | 9 | 3 | 2 | 13 | 32 | 64 | 53 | 25 | 41 | 43 | 36 | 3 | 3 | 6 | 9 | 20 | 8 | 2 | 4 | 0 | 2 | 5 | 6 |
Nucleolus | 9 | 3 | 2 | 4 | 7 | 18 | 47 | 35 | 27 | 35 | 25 | 19 | 1 | 3 | 2 | 10 | 17 | 13 | 0 | 0 | 0 | 0 | 1 | 1 |
Peroxisomes | 1 | 6 | 1 | 6 | 11 | 9 | 12 | 18 | 1 | 6 | 0 | 4 | 2 | 9 | 8 | 13 | 39 | 31 | 10 | 6 | 2 | 4 | 18 | 17 |
SpindlePole | 2 | 1 | 1 | 2 | 5 | 3 | 9 | 19 | 7 | 7 | 5 | 4 | 2 | 3 | 1 | 7 | 8 | 9 | 0 | 1 | 0 | 0 | 1 | 3 |
Vac/Vac Membrane | 42 | 68 | 6 | 21 | 58 | 46 | 40 | 63 | 40 | 57 | 19 | 55 | 52 | 81 | 118 | 73 | 74 | 75 | 6 | 12 | 2 | 20 | 47 | 48 |
Unique Cell Count | 308 | 311 | 44 | 240 | 392 | 370 | 566 | 577 | 395 | 555 | 511 | 565 | 278 | 493 | 596 | 225 | 253 | 215 | 317 | 353 | 81 | 221 | 590 | 759 |
Labelled Cell Count | 394 | 431 | 60 | 326 | 552 | 453 | 707 | 711 | 483 | 697 | 618 | 671 | 429 | 735 | 870 | 281 | 303 | 258 | 317 | 353 | 81 | 221 | 590 | 759 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.1 | 9.0 | 8.2 | 8.1 | 8.9 | 8.1 | 8.0 | 8.0 | 7.1 | 7.5 | 6.9 | 7.3 | 9.4 | 9.1 | 9.6 | 11.0 | 11.3 | 10.3 | 8.3 | 8.4 | 8.9 |
Std Deviation (1e-4) | 1.4 | 1.4 | 1.8 | 1.1 | 1.5 | 1.9 | 1.8 | 1.6 | 1.5 | 1.5 | 1.7 | 1.7 | 1.7 | 1.4 | 1.5 | 2.8 | 3.1 | 3.0 | 1.5 | 1.6 | 1.7 |
Intensity Change (Log2) | – | – | – | -0.03 | 0.11 | -0.02 | -0.04 | -0.03 | -0.21 | -0.14 | -0.24 | -0.18 | 0.2 | 0.15 | 0.23 | 0.43 | 0.46 | 0.33 | 0.02 | 0.03 | 0.12 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | -0.3 | 0.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.6 | 2.2 | 3.7 | 2.5 | 0.4 | -0.1 |
Mitochondria | 2.5 | -0.4 | 0.9 | 0.7 | -0.5 | 2.0 | 1.7 | 4.2 | 2.4 | -0.3 | -0.5 | -2.6 | -10.6 | -10.6 | -11.2 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.4 | 2.2 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0.2 | -0.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0.8 | 0.5 | 1.0 | 2.5 | 2.2 | 2.8 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.6079 | 4.8366 | 4.376 | 4.291 | 4.1769 | 4.527 | 3.2419 | 5.102 | 4.4326 | 3.7637 | 3.3388 | 4.4476 | 2.8172 | 3.728 | 3.2127 | 3.0813 | 1.8676 | 3.3873 |
Actin | 0.0188 | 0.0024 | 0.017 | 0.019 | 0.0009 | 0.0009 | 0.0441 | 0.0085 | 0.0065 | 0.0007 | 0.0187 | 0.006 | 0.0123 | 0.011 | 0.0085 | 0.0288 | 0.0035 | 0.0004 |
Bud | 0.0003 | 0.0003 | 0.0006 | 0.0003 | 0.0001 | 0.0001 | 0.004 | 0.0024 | 0.0011 | 0.0001 | 0.001 | 0.0002 | 0.0002 | 0.0005 | 0.0003 | 0.0002 | 0.0005 | 0 |
Bud Neck | 0.0005 | 0.0001 | 0.001 | 0.0021 | 0.0001 | 0.0001 | 0.0008 | 0.0005 | 0.0009 | 0.0001 | 0.0006 | 0.0002 | 0.0003 | 0.0002 | 0.0001 | 0.0002 | 0.0003 | 0 |
Bud Periphery | 0.0006 | 0.0004 | 0.0009 | 0.0007 | 0.0003 | 0.0002 | 0.0089 | 0.0035 | 0.0016 | 0.0002 | 0.0013 | 0.0002 | 0.0005 | 0.0007 | 0.0008 | 0.0003 | 0.0012 | 0.0001 |
Bud Site | 0.0014 | 0.0015 | 0.007 | 0.0011 | 0.0001 | 0.0002 | 0.0041 | 0.0049 | 0.0058 | 0.0002 | 0.003 | 0.0007 | 0.0008 | 0.0027 | 0.0004 | 0.0005 | 0.0012 | 0 |
Cell Periphery | 0.0003 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0005 | 0.0015 | 0.0006 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0006 | 0 |
Cytoplasm | 0.0041 | 0.0002 | 0.0011 | 0.0002 | 0.0001 | 0.0001 | 0.0063 | 0.0004 | 0.0023 | 0 | 0.0009 | 0.0006 | 0.0047 | 0.0002 | 0.0001 | 0.0001 | 0.0009 | 0 |
Cytoplasmic Foci | 0.0148 | 0.0042 | 0.0112 | 0.0046 | 0.0034 | 0.0024 | 0.0102 | 0.0113 | 0.0116 | 0.0065 | 0.0448 | 0.0209 | 0.0095 | 0.0044 | 0.0019 | 0.0022 | 0.0085 | 0.0012 |
Eisosomes | 0.0004 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0005 | 0.0006 | 0.0004 | 0.0001 | 0.0002 | 0.0002 | 0.0003 | 0.0002 | 0.0005 | 0.0003 | 0.0003 | 0.0001 |
Endoplasmic Reticulum | 0.0022 | 0.0001 | 0.0004 | 0.0001 | 0.0004 | 0.0001 | 0.0013 | 0.0002 | 0.0009 | 0 | 0.0039 | 0.0003 | 0.0016 | 0.0001 | 0.0002 | 0.0001 | 0.0015 | 0.0001 |
Endosome | 0.0393 | 0.0203 | 0.0212 | 0.0047 | 0.03 | 0.009 | 0.0345 | 0.0251 | 0.0142 | 0.0166 | 0.0389 | 0.0064 | 0.0233 | 0.0156 | 0.0081 | 0.0071 | 0.0222 | 0.0136 |
Golgi | 0.0381 | 0.0269 | 0.0228 | 0.0065 | 0.0363 | 0.0238 | 0.0216 | 0.021 | 0.0158 | 0.0071 | 0.0697 | 0.0132 | 0.026 | 0.0203 | 0.0121 | 0.0179 | 0.0246 | 0.0215 |
Lipid Particles | 0.0366 | 0.0024 | 0.0054 | 0.0035 | 0.0206 | 0.003 | 0.0586 | 0.0127 | 0.0125 | 0.0302 | 0.0248 | 0.0178 | 0.0414 | 0.0226 | 0.016 | 0.0013 | 0.0403 | 0.0024 |
Mitochondria | 0.7731 | 0.9172 | 0.8789 | 0.9486 | 0.8578 | 0.951 | 0.7351 | 0.848 | 0.877 | 0.9209 | 0.6795 | 0.9149 | 0.8238 | 0.8832 | 0.9274 | 0.9353 | 0.8368 | 0.9461 |
None | 0.0027 | 0.0001 | 0.0005 | 0.0002 | 0.0001 | 0 | 0.0027 | 0.0002 | 0.0031 | 0.0001 | 0.0004 | 0.0011 | 0.0054 | 0 | 0.0001 | 0 | 0.0024 | 0 |
Nuclear Periphery | 0.0038 | 0.0001 | 0.0009 | 0.0001 | 0.0005 | 0.0002 | 0.0065 | 0.0002 | 0.0015 | 0 | 0.0542 | 0.0002 | 0.0124 | 0.0003 | 0.0029 | 0 | 0.0024 | 0.0001 |
Nucleolus | 0.0062 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0012 | 0.0018 | 0.0012 | 0.0019 | 0.0002 | 0.0021 | 0.0009 | 0.0003 | 0.0002 | 0 | 0.0122 | 0 |
Nucleus | 0.0024 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.0061 | 0.0005 | 0.002 | 0.0002 | 0.0055 | 0.0005 | 0.0028 | 0.0002 | 0.0006 | 0 | 0.0091 | 0 |
Peroxisomes | 0.0234 | 0.0081 | 0.0176 | 0.0067 | 0.0365 | 0.0036 | 0.0373 | 0.0298 | 0.0262 | 0.0106 | 0.0412 | 0.0108 | 0.0228 | 0.0261 | 0.006 | 0.0027 | 0.0114 | 0.0067 |
Punctate Nuclear | 0.01 | 0 | 0.0009 | 0.0003 | 0.0001 | 0 | 0.0009 | 0.0001 | 0.0018 | 0.0001 | 0.0015 | 0.0015 | 0.0029 | 0 | 0 | 0 | 0.0069 | 0 |
Vacuole | 0.0081 | 0.0083 | 0.0041 | 0.0003 | 0.0034 | 0.0014 | 0.0074 | 0.0151 | 0.0081 | 0.002 | 0.003 | 0.0008 | 0.0028 | 0.0058 | 0.0044 | 0.0006 | 0.0064 | 0.0032 |
Vacuole Periphery | 0.0129 | 0.0069 | 0.0075 | 0.0006 | 0.0087 | 0.0038 | 0.0074 | 0.0116 | 0.0047 | 0.0022 | 0.0064 | 0.0013 | 0.005 | 0.0053 | 0.0088 | 0.0022 | 0.0068 | 0.0043 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 13.4153 | 6.9956 | 7.7865 | 16.6474 | 13.7698 | 7.2626 | 10.8624 | 17.0498 | 17.0877 | 16.6121 |
Translational Efficiency | 1.5077 | 2.2169 | 2.3669 | 1.1923 | 1.0705 | 2.8712 | 1.893 | 1.0988 | 1.3837 | 1.4037 |
Dataset | Hit |
---|---|
Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|