Standard name | |
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Human Ortholog | |
Description | Phosphatidylinositol transfer protein; has a potential role in regulating lipid and fatty acid metabolism under heme-depleted conditions; interacts specifically with thioredoxin peroxidase; may have a role in oxidative stress resistance; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 3 | 3 | 1 | 0 | 1 | 8 | 2 | 5 | 5 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 4 | 0 | 1 | 2 |
Bud | 2 | 4 | 2 | 2 | 1 | 15 | 12 | 11 | 5 | 14 | 10 | 20 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 3 | 3 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 84 | 62 | 81 | 119 | 149 | 83 | 91 | 52 | 76 | 71 | 116 | 89 | 19 | 33 | 34 | 30 | 17 | 32 | 4 | 2 | 6 | 1 | 6 | 5 |
Cytoplasm | 349 | 442 | 511 | 289 | 429 | 554 | 671 | 655 | 542 | 625 | 585 | 743 | 176 | 239 | 262 | 249 | 232 | 194 | 345 | 448 | 476 | 158 | 211 | 239 |
Endoplasmic Reticulum | 6 | 15 | 7 | 17 | 29 | 13 | 56 | 28 | 47 | 36 | 40 | 42 | 0 | 6 | 3 | 8 | 4 | 2 | 6 | 3 | 16 | 2 | 2 | 7 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 2 | 2 | 0 | 0 | 1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 1 |
Mitochondria | 0 | 1 | 1 | 1 | 1 | 8 | 18 | 20 | 34 | 33 | 40 | 65 | 0 | 0 | 1 | 4 | 2 | 1 | 2 | 1 | 1 | 1 | 0 | 0 |
Nucleus | 3 | 4 | 2 | 1 | 4 | 0 | 2 | 7 | 1 | 3 | 1 | 4 | 0 | 3 | 1 | 3 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 1 | 0 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 1 | 2 | 1 | 4 | 4 | 9 | 32 | 31 | 11 | 26 | 5 | 29 | 0 | 0 | 1 | 5 | 4 | 1 | 3 | 1 | 3 | 3 | 3 | 1 |
Unique Cell Count | 356 | 461 | 519 | 314 | 480 | 585 | 782 | 740 | 633 | 721 | 680 | 877 | 176 | 245 | 265 | 259 | 238 | 203 | 375 | 468 | 520 | 173 | 235 | 268 |
Labelled Cell Count | 445 | 530 | 605 | 436 | 620 | 683 | 886 | 810 | 725 | 812 | 803 | 1003 | 195 | 281 | 302 | 301 | 262 | 239 | 375 | 468 | 520 | 173 | 235 | 268 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 16.2 | 14.1 | 11.8 | 11.2 | 11.3 | 11.0 | 10.8 | 10.6 | 10.9 | 10.5 | 10.3 | 9.9 | 13.8 | 13.5 | 13.2 | 15.6 | 15.6 | 16.0 | 14.3 | 15.1 | 15.9 |
Std Deviation (1e-4) | 2.5 | 2.5 | 2.3 | 2.0 | 1.9 | 1.9 | 2.1 | 2.0 | 2.1 | 2.0 | 1.8 | 2.2 | 2.0 | 1.9 | 1.8 | 5.8 | 3.7 | 4.3 | 2.5 | 2.5 | 2.7 |
Intensity Change (Log2) | – | – | – | -0.07 | -0.06 | -0.1 | -0.13 | -0.15 | -0.11 | -0.16 | -0.19 | -0.25 | 0.22 | 0.2 | 0.17 | 0.41 | 0.4 | 0.44 | 0.28 | 0.36 | 0.44 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 2.9 | 2.0 | 1.9 | 0 | 2.4 | 1.9 | 2.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 7.3 | 5.8 | -0.7 | -2.1 | -4.9 | -1.8 | -3.1 | 0.7 | -3.0 | -1.6 | -0.8 | -1.0 | -1.5 | -3.2 | 0.1 |
Cytoplasm | -4.6 | -6.1 | -3.4 | -7.8 | -6.6 | -7.7 | -7.4 | -7.6 | -8.2 | 1.7 | -0.9 | 0.5 | -2.0 | -0.9 | -2.3 |
Endoplasmic Reticulum | 3.4 | 4.0 | 1.1 | 4.8 | 2.6 | 4.9 | 3.5 | 4.0 | 3.4 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 3.1 | 3.4 | 5.1 | 4.7 | 5.4 | 6.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 4.4 | 4.4 | 2.6 | 4.1 | 0 | 3.9 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 6.9614 | 8.4206 | 6.9634 | 6.272 | 6.3368 | 7.1252 | 10.3579 | 12.6265 | 11.8536 | 11.9997 | 11.3209 | 11.2195 | 10.0264 | 11.0256 | 10.4368 | 9.003 | 9.8728 | 10.2103 |
Actin | 0.0392 | 0.0072 | 0.0177 | 0.0684 | 0.0344 | 0.0061 | 0.0199 | 0.0015 | 0.0016 | 0.0016 | 0.0101 | 0.0037 | 0.0006 | 0.0007 | 0.0027 | 0.0138 | 0.0004 | 0.0009 |
Bud | 0.0007 | 0.0079 | 0.0016 | 0.0017 | 0.0015 | 0.0103 | 0.0005 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 |
Bud Neck | 0.0033 | 0.0007 | 0.002 | 0.0034 | 0.0034 | 0.006 | 0.0016 | 0.0004 | 0.0015 | 0.0009 | 0.0015 | 0.006 | 0.0004 | 0.0004 | 0.0009 | 0.0009 | 0.0009 | 0.0096 |
Bud Periphery | 0.001 | 0.0027 | 0.0019 | 0.003 | 0.0026 | 0.0052 | 0.0005 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.0002 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 |
Bud Site | 0.0038 | 0.0243 | 0.0135 | 0.0066 | 0.0049 | 0.0012 | 0.0032 | 0.0031 | 0.0015 | 0.0002 | 0.0006 | 0.0007 | 0.0002 | 0.0034 | 0.0003 | 0.0003 | 0.0001 | 0.0001 |
Cell Periphery | 0.0015 | 0.001 | 0.0011 | 0.0013 | 0.0015 | 0.0009 | 0.0019 | 0.0011 | 0.0009 | 0.0006 | 0.0004 | 0.0003 | 0.0009 | 0.0004 | 0.0002 | 0.0002 | 0.0001 | 0.0002 |
Cytoplasm | 0.8402 | 0.9314 | 0.8771 | 0.8161 | 0.813 | 0.921 | 0.9133 | 0.9806 | 0.9809 | 0.9727 | 0.8924 | 0.9703 | 0.9727 | 0.9909 | 0.9738 | 0.9564 | 0.9887 | 0.983 |
Cytoplasmic Foci | 0.0115 | 0.0011 | 0.0117 | 0.0327 | 0.0181 | 0.011 | 0.0164 | 0.0013 | 0.0036 | 0.0028 | 0.0169 | 0.004 | 0.0004 | 0.0004 | 0.0025 | 0.0122 | 0.001 | 0.0005 |
Eisosomes | 0.0003 | 0 | 0.0004 | 0.0003 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 |
Endoplasmic Reticulum | 0.0092 | 0.0075 | 0.0043 | 0.01 | 0.0078 | 0.0042 | 0.0054 | 0.0025 | 0.003 | 0.0104 | 0.0193 | 0.0045 | 0.0082 | 0.0014 | 0.0026 | 0.0055 | 0.0042 | 0.0032 |
Endosome | 0.0249 | 0.0002 | 0.0136 | 0.0083 | 0.039 | 0.0048 | 0.0057 | 0.0004 | 0.0018 | 0.0014 | 0.0166 | 0.0008 | 0.0027 | 0.0001 | 0.0014 | 0.0009 | 0.0005 | 0.0001 |
Golgi | 0.0059 | 0.0001 | 0.0105 | 0.0064 | 0.0139 | 0.0035 | 0.0037 | 0.0001 | 0.0007 | 0.0004 | 0.0042 | 0.0004 | 0.0003 | 0 | 0.0006 | 0.0006 | 0 | 0 |
Lipid Particles | 0.0181 | 0.0001 | 0.0069 | 0.0126 | 0.0197 | 0.0042 | 0.0013 | 0.0001 | 0.0001 | 0.0004 | 0.009 | 0.0002 | 0.0006 | 0 | 0.0034 | 0.0005 | 0 | 0 |
Mitochondria | 0.0158 | 0.0005 | 0.0082 | 0.0019 | 0.0109 | 0.0031 | 0.0013 | 0 | 0.0002 | 0.0001 | 0.0006 | 0.0001 | 0.002 | 0 | 0.0002 | 0.0001 | 0 | 0 |
None | 0.0056 | 0.0021 | 0.0162 | 0.0082 | 0.0014 | 0.0033 | 0.0184 | 0.006 | 0.0018 | 0.0055 | 0.0209 | 0.0053 | 0.0023 | 0.0009 | 0.007 | 0.0062 | 0.0019 | 0.0008 |
Nuclear Periphery | 0.004 | 0.001 | 0.0011 | 0.0014 | 0.0077 | 0.0021 | 0.0007 | 0.0005 | 0.0003 | 0.0004 | 0.0017 | 0.0004 | 0.0036 | 0.0002 | 0.0006 | 0.0004 | 0.0005 | 0.0002 |
Nucleolus | 0.0022 | 0.0002 | 0.0004 | 0.0003 | 0.0011 | 0.0005 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0005 | 0 | 0.0001 | 0 | 0 | 0 |
Nucleus | 0.0026 | 0.0113 | 0.0021 | 0.0023 | 0.0048 | 0.0095 | 0.0011 | 0.0015 | 0.0011 | 0.0017 | 0.0015 | 0.001 | 0.0022 | 0.0009 | 0.0008 | 0.0006 | 0.0011 | 0.001 |
Peroxisomes | 0.0028 | 0.0001 | 0.0038 | 0.0121 | 0.0014 | 0.0009 | 0.0027 | 0 | 0.0003 | 0 | 0.0016 | 0.0006 | 0 | 0 | 0.001 | 0.0004 | 0 | 0 |
Punctate Nuclear | 0.0042 | 0.0004 | 0.0017 | 0.0023 | 0.0015 | 0.0009 | 0.0008 | 0.0004 | 0.0001 | 0.0002 | 0.0009 | 0.0012 | 0.0002 | 0.0001 | 0.0014 | 0.0006 | 0.0002 | 0.0001 |
Vacuole | 0.0025 | 0.0003 | 0.0037 | 0.0007 | 0.0083 | 0.0009 | 0.0011 | 0.0003 | 0.0003 | 0.0004 | 0.001 | 0.0002 | 0.001 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0001 |
Vacuole Periphery | 0.0009 | 0 | 0.0006 | 0.0002 | 0.0031 | 0.0004 | 0.0002 | 0 | 0 | 0 | 0.0002 | 0 | 0.0011 | 0 | 0.0001 | 0 | 0 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 90.3766 | 84.4087 | 55.4766 | 47.8286 | 71.7055 | 78.1932 | 65.838 | 54.8595 | 51.2588 | 70.089 |
Translational Efficiency | 0.9647 | 0.8645 | 0.8931 | 0.864 | 1.008 | 1.0923 | 0.9763 | 0.9432 | 1.186 | 1.2329 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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