Standard name | |
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Human Ortholog | |
Description | Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; expressed at lower level than Tub1p; TUB3 has a paralog, TUB1, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 8 | 47 | 15 | 13 | 5 | 4 | 6 | 0 | 2 | 0 | 0 | 2 | 4 | 2 | 1 | 22 | 7 | 10 | 7 | 14 | 19 | 16 | 13 | 25 |
Bud | 1 | 2 | 5 | 3 | 8 | 8 | 6 | 4 | 15 | 8 | 4 | 5 | 1 | 0 | 1 | 2 | 0 | 3 | 8 | 20 | 14 | 16 | 22 | 23 |
Bud Neck | 0 | 0 | 1 | 0 | 1 | 5 | 2 | 4 | 5 | 7 | 3 | 2 | 0 | 0 | 0 | 1 | 0 | 2 | 2 | 4 | 3 | 1 | 5 | 13 |
Bud Site | 1 | 0 | 0 | 1 | 0 | 7 | 4 | 4 | 18 | 24 | 6 | 11 | 0 | 0 | 0 | 1 | 0 | 4 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Cytoplasm | 33 | 74 | 40 | 23 | 20 | 9 | 10 | 17 | 9 | 6 | 3 | 8 | 57 | 86 | 76 | 70 | 39 | 43 | 27 | 60 | 24 | 21 | 31 | 24 |
Endoplasmic Reticulum | 8 | 16 | 8 | 2 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 2 | 0 | 5 | 4 | 12 | 4 | 3 | 5 | 4 | 3 | 4 |
Endosome | 185 | 156 | 166 | 120 | 123 | 149 | 142 | 104 | 56 | 49 | 27 | 22 | 146 | 254 | 208 | 133 | 50 | 60 | 65 | 104 | 70 | 43 | 72 | 80 |
Golgi | 4 | 29 | 7 | 7 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 8 | 2 | 0 | 36 | 32 | 24 | 7 | 5 | 3 | 4 | 44 | 25 |
Mitochondria | 14 | 0 | 8 | 8 | 13 | 39 | 51 | 71 | 126 | 98 | 49 | 55 | 1 | 0 | 0 | 49 | 12 | 25 | 2 | 5 | 11 | 1 | 6 | 11 |
Nucleus | 0 | 0 | 2 | 1 | 0 | 1 | 2 | 7 | 3 | 7 | 1 | 2 | 0 | 0 | 0 | 6 | 2 | 2 | 1 | 1 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 2 | 3 | 2 | 2 |
Nucleolus | 63 | 59 | 48 | 49 | 89 | 146 | 195 | 198 | 202 | 198 | 97 | 133 | 26 | 69 | 116 | 321 | 141 | 171 | 2 | 7 | 2 | 1 | 1 | 1 |
Peroxisomes | 2 | 1 | 6 | 7 | 14 | 20 | 45 | 33 | 34 | 37 | 9 | 16 | 3 | 11 | 37 | 18 | 5 | 11 | 1 | 3 | 3 | 3 | 12 | 14 |
SpindlePole | 34 | 60 | 68 | 63 | 103 | 104 | 163 | 121 | 106 | 145 | 57 | 68 | 36 | 91 | 108 | 332 | 138 | 126 | 168 | 203 | 160 | 77 | 119 | 106 |
Vac/Vac Membrane | 31 | 64 | 31 | 11 | 23 | 5 | 13 | 22 | 7 | 3 | 5 | 4 | 10 | 22 | 29 | 52 | 36 | 28 | 3 | 8 | 4 | 1 | 3 | 2 |
Unique Cell Count | 285 | 389 | 306 | 216 | 270 | 331 | 407 | 415 | 395 | 380 | 170 | 229 | 229 | 391 | 369 | 662 | 301 | 347 | 338 | 473 | 359 | 204 | 358 | 352 |
Labelled Cell Count | 384 | 508 | 406 | 308 | 400 | 498 | 642 | 588 | 585 | 583 | 262 | 330 | 292 | 539 | 576 | 1048 | 466 | 521 | 338 | 473 | 359 | 204 | 358 | 352 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 11.2 | 14.2 | 11.2 | 10.9 | 10.5 | 9.9 | 9.5 | 9.2 | 9.2 | 9.1 | 9.1 | 8.9 | 12.2 | 11.7 | 11.1 | 16.1 | 17.5 | 18.9 | 10.9 | 10.6 | 11.4 |
Std Deviation (1e-4) | 2.1 | 2.3 | 2.5 | 2.1 | 2.2 | 1.9 | 2.1 | 2.0 | 2.2 | 2.3 | 2.3 | 2.5 | 2.2 | 2.0 | 2.2 | 4.1 | 4.9 | 6.0 | 2.0 | 2.1 | 2.0 |
Intensity Change (Log2) | – | – | – | -0.04 | -0.1 | -0.18 | -0.24 | -0.29 | -0.28 | -0.31 | -0.3 | -0.33 | 0.12 | 0.06 | -0.01 | 0.52 | 0.64 | 0.75 | -0.04 | -0.08 | 0.02 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0.6 | -2.0 | -2.7 | -2.7 | -4.6 | -3.8 | -4.4 | -2.9 | -2.6 | -2.0 | -3.7 | -3.9 | -1.2 | -1.7 | -1.3 |
Bud | 0 | 1.1 | 0.7 | 0 | 0 | 1.7 | 0.4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 3.8 | 4.5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -0.8 | -2.2 | -4.9 | -5.5 | -4.4 | -5.6 | -6.0 | -4.1 | -3.8 | 3.5 | 3.0 | 2.6 | -1.1 | 0 | -0.3 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -1.1 | 0.6 |
Endosome | 0.3 | -2.1 | -2.3 | -5.2 | -8.0 | -11.3 | -11.6 | -8.2 | -10.7 | 2.2 | 2.9 | 0.6 | -10.7 | -9.7 | -9.9 |
Golgi | 0.7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.8 | 0 | 0 | 2.2 | 4.2 | 2.8 |
Mitochondria | 0.7 | 1.4 | 4.4 | 4.8 | 6.2 | 9.8 | 8.3 | 8.4 | 7.6 | 0 | 0 | 0 | 2.9 | 0.9 | 2.7 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 2.0 | 4.9 | 7.8 | 9.0 | 9.0 | 9.7 | 9.9 | 9.4 | 10.3 | -1.4 | 0.7 | 4.7 | 9.8 | 8.3 | 9.1 |
Peroxisomes | 0.9 | 2.1 | 2.6 | 4.7 | 3.5 | 3.8 | 4.2 | 2.0 | 2.9 | 0 | 0.7 | 4.3 | 0.7 | -0.3 | 1.0 |
SpindlePole | 1.8 | 4.2 | 2.6 | 5.0 | 2.1 | 1.4 | 4.5 | 2.7 | 2.0 | -1.9 | 0.3 | 2.1 | 8.2 | 6.1 | 3.9 |
Vacuole | -2.1 | -0.7 | -4.7 | -3.8 | -2.5 | -4.8 | -5.6 | -2.8 | -3.9 | -2.5 | -2.2 | -1.0 | -1.2 | 0.7 | -0.9 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 6.1533 | 8.4021 | 7.0524 | 6.9938 | 6.8383 | 7.2086 | 7.5777 | 10.3956 | 9.7306 | 8.8256 | 8.7324 | 10.2477 | 10.04 | 12.922 | 11.9124 | 11.2881 | 10.9178 | 12.203 |
Actin | 0.0069 | 0.0053 | 0.003 | 0.005 | 0.0252 | 0.0042 | 0.0488 | 0.0113 | 0.0316 | 0.0038 | 0.0631 | 0.0137 | 0.0186 | 0.002 | 0.0081 | 0.0121 | 0.0103 | 0.0065 |
Bud | 0.001 | 0.0017 | 0.0005 | 0.0004 | 0.001 | 0.0005 | 0.0007 | 0.0009 | 0.0023 | 0.0009 | 0.0016 | 0.0045 | 0.0004 | 0.0015 | 0.0008 | 0.0011 | 0.0006 | 0.0006 |
Bud Neck | 0.0043 | 0.002 | 0.0108 | 0.0025 | 0.0439 | 0.0118 | 0.0052 | 0.002 | 0.0032 | 0.0019 | 0.0059 | 0.0027 | 0.0022 | 0.0028 | 0.0055 | 0.0258 | 0.0058 | 0.0089 |
Bud Periphery | 0.0009 | 0.0006 | 0.0006 | 0.0003 | 0.0008 | 0.0002 | 0.0009 | 0.0003 | 0.0008 | 0.0022 | 0.0011 | 0.0012 | 0.0003 | 0.0005 | 0.0007 | 0.0007 | 0.0004 | 0.0003 |
Bud Site | 0.0082 | 0.0369 | 0.0102 | 0.0013 | 0.0024 | 0.0007 | 0.0087 | 0.012 | 0.0026 | 0.002 | 0.0039 | 0.0013 | 0.0052 | 0.0155 | 0.0091 | 0.0024 | 0.0012 | 0.001 |
Cell Periphery | 0.0006 | 0.0003 | 0.0003 | 0 | 0.0001 | 0.0001 | 0.0005 | 0 | 0.0001 | 0.0004 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0 |
Cytoplasm | 0.0741 | 0.2201 | 0.0456 | 0.1117 | 0.3783 | 0.2772 | 0.0586 | 0.1393 | 0.0669 | 0.0302 | 0.22 | 0.1668 | 0.1202 | 0.3164 | 0.1024 | 0.1361 | 0.2499 | 0.214 |
Cytoplasmic Foci | 0.383 | 0.2618 | 0.3696 | 0.3451 | 0.163 | 0.294 | 0.3507 | 0.3939 | 0.3533 | 0.3864 | 0.2164 | 0.3877 | 0.2768 | 0.1888 | 0.2598 | 0.1917 | 0.1835 | 0.2722 |
Eisosomes | 0.0001 | 0.0001 | 0.0003 | 0 | 0.0001 | 0 | 0.0007 | 0 | 0.0005 | 0.0002 | 0.0006 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.016 | 0.0042 | 0.002 | 0.0052 | 0.031 | 0.0064 | 0.0033 | 0.0023 | 0.0014 | 0.003 | 0.0156 | 0.0037 | 0.0099 | 0.0023 | 0.0016 | 0.0049 | 0.0121 | 0.0049 |
Endosome | 0.0717 | 0.0145 | 0.0099 | 0.0687 | 0.1905 | 0.0665 | 0.084 | 0.0424 | 0.0276 | 0.026 | 0.1417 | 0.0768 | 0.0833 | 0.0268 | 0.0259 | 0.0376 | 0.1557 | 0.0631 |
Golgi | 0.023 | 0.0047 | 0.0034 | 0.0171 | 0.0202 | 0.0129 | 0.0181 | 0.0061 | 0.0068 | 0.007 | 0.0288 | 0.0142 | 0.0095 | 0.0048 | 0.0061 | 0.01 | 0.0239 | 0.0095 |
Lipid Particles | 0.0173 | 0.0166 | 0.004 | 0.0118 | 0.0082 | 0.0087 | 0.0435 | 0.0019 | 0.0058 | 0.0169 | 0.0232 | 0.0084 | 0.0132 | 0.0032 | 0.0067 | 0.0132 | 0.041 | 0.0055 |
Mitochondria | 0.0042 | 0.0008 | 0.0016 | 0.0028 | 0.0095 | 0.0026 | 0.0062 | 0.0006 | 0.0018 | 0.0489 | 0.016 | 0.0043 | 0.0016 | 0.0009 | 0.0043 | 0.0083 | 0.0049 | 0.0041 |
None | 0.0018 | 0.002 | 0.0086 | 0.0012 | 0.0021 | 0.0014 | 0.0102 | 0.002 | 0.002 | 0.0347 | 0.0046 | 0.0017 | 0.0116 | 0.0018 | 0.0032 | 0.0026 | 0.0043 | 0.0021 |
Nuclear Periphery | 0.0044 | 0.0039 | 0.0043 | 0.0055 | 0.0255 | 0.0126 | 0.0138 | 0.0039 | 0.0025 | 0.0031 | 0.0318 | 0.008 | 0.0184 | 0.0096 | 0.0038 | 0.009 | 0.0383 | 0.0129 |
Nucleolus | 0.0017 | 0.012 | 0.0063 | 0.0049 | 0.0017 | 0.001 | 0.006 | 0.0025 | 0.0016 | 0.0024 | 0.0027 | 0.0007 | 0.0048 | 0.0046 | 0.0036 | 0.0024 | 0.0048 | 0.0027 |
Nucleus | 0.0096 | 0.0245 | 0.0269 | 0.0054 | 0.0091 | 0.0266 | 0.0075 | 0.0155 | 0.0086 | 0.0035 | 0.0114 | 0.016 | 0.024 | 0.0704 | 0.031 | 0.0421 | 0.0281 | 0.0427 |
Peroxisomes | 0.0205 | 0.0061 | 0.0066 | 0.0056 | 0.0232 | 0.0056 | 0.0519 | 0.02 | 0.0252 | 0.0207 | 0.0432 | 0.0233 | 0.0109 | 0.0096 | 0.01 | 0.0134 | 0.0442 | 0.015 |
Punctate Nuclear | 0.3455 | 0.38 | 0.4839 | 0.4024 | 0.0466 | 0.2623 | 0.2753 | 0.3419 | 0.4546 | 0.4039 | 0.157 | 0.2628 | 0.3838 | 0.3348 | 0.5138 | 0.4833 | 0.1808 | 0.331 |
Vacuole | 0.0043 | 0.0017 | 0.0015 | 0.0022 | 0.0116 | 0.0035 | 0.0037 | 0.0009 | 0.0007 | 0.0015 | 0.0069 | 0.0015 | 0.0042 | 0.003 | 0.0028 | 0.0022 | 0.0068 | 0.0022 |
Vacuole Periphery | 0.0012 | 0.0003 | 0.0003 | 0.0009 | 0.0059 | 0.0012 | 0.0015 | 0.0003 | 0.0003 | 0.0006 | 0.0043 | 0.0006 | 0.0009 | 0.0005 | 0.0005 | 0.0008 | 0.0033 | 0.0007 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 148.4401 | 162.1844 | 137.853 | 99.3164 | 97.2987 | 149.1821 | 182.6191 | 157.4653 | 135.8985 | 95.4909 |
Translational Efficiency | 0.9651 | 1.0508 | 0.9046 | 1.09 | 0.8694 | 0.7982 | 0.9211 | 0.8989 | 0.7754 | 0.8014 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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