Standard name | |
---|---|
Human Ortholog | |
Description | Putative cytochrome b5 reductase, localized to the plasma membrane; may be involved in regulation of lifespan; required for maturation of Gas1p and Pho8p, proposed to be involved in protein trafficking; PGA3 has a paralog, AIM33, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 12 | 4 | 26 | 26 | 50 | 20 | 14 | 19 | 23 | 23 | 33 | 30 | 12 | 8 | 6 | 2 | 2 | 0 | 3 | 6 | 4 | 1 | 1 | 1 |
Bud | 3 | 0 | 11 | 4 | 30 | 5 | 24 | 22 | 14 | 22 | 25 | 25 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 5 | 1 | 0 | 2 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 1 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 9 | 23 | 16 | 21 | 36 | 10 | 21 | 22 | 23 | 21 | 20 | 30 | 27 | 27 | 42 | 17 | 21 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 39 | 85 | 73 | 55 | 174 | 232 | 280 | 334 | 209 | 282 | 233 | 200 | 20 | 18 | 22 | 38 | 47 | 16 | 8 | 9 | 5 | 0 | 4 | 5 |
Endoplasmic Reticulum | 110 | 295 | 189 | 187 | 168 | 158 | 152 | 146 | 89 | 94 | 107 | 86 | 208 | 147 | 180 | 2 | 2 | 0 | 176 | 344 | 298 | 122 | 187 | 163 |
Endosome | 0 | 0 | 3 | 1 | 6 | 0 | 2 | 5 | 1 | 4 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 0 | 0 | 0 |
Golgi | 1 | 2 | 5 | 11 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 3 | 1 | 2 | 4 | 0 | 0 | 0 | 0 | 0 | 2 | 0 |
Mitochondria | 0 | 0 | 6 | 1 | 3 | 4 | 2 | 4 | 8 | 14 | 25 | 24 | 1 | 0 | 0 | 1 | 1 | 0 | 2 | 2 | 4 | 0 | 1 | 3 |
Nucleus | 1 | 0 | 1 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 1 | 2 | 2 | 5 | 0 | 0 | 3 | 3 | 2 | 5 | 2 | 3 | 3 | 7 | 5 | 0 | 0 | 0 | 1 | 2 | 5 | 0 | 2 | 0 |
Nucleolus | 2 | 1 | 0 | 0 | 1 | 0 | 3 | 0 | 0 | 3 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Vac/Vac Membrane | 7 | 5 | 33 | 24 | 34 | 31 | 31 | 33 | 31 | 65 | 28 | 37 | 7 | 2 | 1 | 3 | 5 | 0 | 6 | 14 | 17 | 4 | 10 | 6 |
Unique Cell Count | 166 | 373 | 293 | 276 | 407 | 422 | 482 | 524 | 356 | 469 | 402 | 376 | 247 | 176 | 217 | 61 | 74 | 17 | 208 | 397 | 347 | 133 | 218 | 187 |
Labelled Cell Count | 185 | 417 | 365 | 336 | 504 | 462 | 533 | 588 | 401 | 533 | 477 | 437 | 282 | 212 | 257 | 66 | 84 | 18 | 208 | 397 | 347 | 133 | 218 | 187 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 16.0 | 19.7 | 14.5 | 15.5 | 13.5 | 11.9 | 10.7 | 10.1 | 9.1 | 8.8 | 8.6 | 8.8 | 19.7 | 17.2 | 17.0 | 27.4 | 25.5 | 25.1 | 21.2 | 21.0 | 21.6 |
Std Deviation (1e-4) | 4.8 | 3.9 | 4.0 | 2.7 | 2.3 | 2.2 | 2.1 | 1.8 | 1.9 | 2.1 | 1.8 | 2.2 | 3.6 | 2.9 | 2.9 | 6.3 | 7.9 | 6.4 | 4.7 | 4.2 | 5.0 |
Intensity Change (Log2) | – | – | – | 0.1 | -0.1 | -0.28 | -0.44 | -0.52 | -0.67 | -0.71 | -0.74 | -0.72 | 0.45 | 0.25 | 0.23 | 0.92 | 0.82 | 0.79 | 0.55 | 0.54 | 0.58 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0.2 | 1.4 | -2.2 | -3.6 | -3.2 | -1.2 | -2.2 | -0.3 | -0.4 | -1.8 | -1.8 | -2.8 | 0 | -1.8 | 0 |
Bud | -1.7 | 2.0 | -2.3 | 0.8 | 0.3 | 0.1 | 0.6 | 1.4 | 1.6 | -3.1 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 1.0 | 1.7 | -2.2 | -0.7 | -0.8 | 0.5 | -0.6 | -0.3 | 1.3 | 2.3 | 3.6 | 4.9 | 5.5 | 5.9 | 0 |
Cytoplasm | -1.4 | 4.9 | 8.0 | 9.0 | 10.6 | 8.6 | 9.5 | 8.7 | 7.4 | -5.2 | -3.9 | -4.2 | 5.7 | 6.3 | 0 |
Endoplasmic Reticulum | 0.8 | -6.1 | -7.1 | -9.0 | -10.2 | -10.1 | -12.4 | -10.0 | -10.9 | 5.2 | 4.4 | 4.6 | -8.7 | -9.5 | -5.3 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 1.6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 0.2 | 0.8 | 2.6 | 2.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -1.0 | -1.3 | -1.8 | -2.4 | -2.5 | -1.1 | 1.0 | -2.0 | -0.6 | -3.7 | -4.0 | -4.8 | -1.5 | -1.1 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 17.4896 | 16.7715 | 16.7266 | 16.2795 | 14.9361 | 15.563 | 18.0287 | 18.0088 | 18.1966 | 16.9 | 18.8116 | 17.7136 | 20.8056 | 22.1424 | 21.0058 | 21.7658 | 20.746 | 20.7524 |
Actin | 0.0002 | 0.0005 | 0.0001 | 0 | 0.0004 | 0.0004 | 0.0003 | 0.0001 | 0.0004 | 0.0004 | 0.0004 | 0.0003 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0.0002 |
Bud | 0.0003 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0.0002 | 0.0005 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0002 | 0 | 0.0002 | 0.0002 |
Bud Periphery | 0.0003 | 0.0001 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0.0005 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0.001 | 0.0006 | 0 | 0 | 0.0001 | 0 | 0 | 0.0064 | 0.0002 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 |
Cell Periphery | 0.0023 | 0.0095 | 0.0019 | 0.0009 | 0.0025 | 0.0011 | 0.0012 | 0.0036 | 0.0033 | 0.0017 | 0.0022 | 0.0018 | 0.0023 | 0.0086 | 0.0036 | 0.0009 | 0.0027 | 0.0014 |
Cytoplasm | 0.0142 | 0.0333 | 0.0204 | 0.0029 | 0.0387 | 0.0101 | 0.0063 | 0.0126 | 0.0156 | 0.0047 | 0.0062 | 0.009 | 0.0057 | 0.0179 | 0.0135 | 0.001 | 0.0112 | 0.0024 |
Cytoplasmic Foci | 0.0002 | 0.0012 | 0.0004 | 0.0003 | 0.0013 | 0.0002 | 0.0001 | 0.002 | 0.0006 | 0.0021 | 0.001 | 0.0005 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0003 | 0 |
Eisosomes | 0 | 0.0001 | 0 | 0 | 0.0003 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.9613 | 0.9011 | 0.9653 | 0.9652 | 0.9367 | 0.9728 | 0.9701 | 0.951 | 0.9617 | 0.9434 | 0.9663 | 0.974 | 0.9697 | 0.9528 | 0.9719 | 0.9954 | 0.9684 | 0.9835 |
Endosome | 0.0006 | 0.0043 | 0.0011 | 0.001 | 0.0027 | 0.0018 | 0.0008 | 0.0014 | 0.0023 | 0.0036 | 0.0038 | 0.001 | 0.0005 | 0.0004 | 0.0002 | 0 | 0.0011 | 0.0005 |
Golgi | 0.0001 | 0.0012 | 0.0002 | 0.0004 | 0.0007 | 0.0003 | 0.0001 | 0.0004 | 0.0014 | 0.0018 | 0.0033 | 0.0003 | 0.0001 | 0.0003 | 0.0001 | 0 | 0.0004 | 0.0016 |
Lipid Particles | 0.002 | 0.013 | 0.0029 | 0.0245 | 0.0032 | 0.0011 | 0.0008 | 0.0124 | 0.0047 | 0.0383 | 0.0061 | 0.0051 | 0.0018 | 0.0121 | 0.0041 | 0.0004 | 0.0056 | 0.0012 |
Mitochondria | 0.0001 | 0.0002 | 0 | 0 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0008 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
None | 0.0004 | 0.0005 | 0.0002 | 0 | 0.0011 | 0.0001 | 0.0012 | 0.0006 | 0.0008 | 0 | 0.0002 | 0.0001 | 0.0002 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0.0108 | 0.0185 | 0.0044 | 0.0028 | 0.0065 | 0.0074 | 0.0158 | 0.003 | 0.0055 | 0.0024 | 0.0068 | 0.0045 | 0.0156 | 0.0041 | 0.0035 | 0.0017 | 0.0042 | 0.0067 |
Nucleolus | 0.0002 | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0.002 | 0.0056 | 0.0003 | 0.0002 | 0.0008 | 0.0006 | 0.0008 | 0.0004 | 0.0008 | 0.0001 | 0.0001 | 0.0003 | 0.0014 | 0.0001 | 0.0002 | 0 | 0.0002 | 0.0005 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Punctate Nuclear | 0.0001 | 0.0008 | 0.0001 | 0 | 0.0004 | 0.0001 | 0.0001 | 0.0005 | 0.0002 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 |
Vacuole | 0.0033 | 0.0081 | 0.0023 | 0.0013 | 0.0037 | 0.0033 | 0.0017 | 0.0045 | 0.0018 | 0.001 | 0.0017 | 0.0024 | 0.0022 | 0.0028 | 0.0025 | 0.0006 | 0.0054 | 0.0016 |
Vacuole Periphery | 0.0002 | 0.0004 | 0.0001 | 0.0001 | 0.0002 | 0.0002 | 0.0005 | 0.0001 | 0.0002 | 0.0001 | 0.0009 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 227.9664 | 212.1917 | 178.5014 | 106.0988 | 83.7952 | 197.3049 | 207.6431 | 191.4002 | 137.8898 | 118.3245 |
Translational Efficiency | 1.0577 | 1.2616 | 1.0738 | 1.1919 | 1.3723 | 0.9938 | 1.1067 | 0.8335 | 0.9038 | 0.8708 |
Dataset | Hit |
---|---|
Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|