Standard name | |
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Human Ortholog | |
Description | Constituent of 66S pre-ribosomal particles; forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; homologous to mammalian Bop1 |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 2 |
Bud | 0 | 3 | 0 | 0 | 0 | 1 | 2 | – | 3 | 3 | 2 | 4 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 11 |
Bud Neck | 0 | 0 | 2 | 0 | 4 | 0 | 3 | – | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 2 | 2 | 3 | 0 | 2 | 1 | 2 | – | 7 | 5 | 2 | 4 | 0 | 0 | 0 | 4 | 3 | 7 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 200 | 285 | 238 | 126 | 274 | 250 | 365 | – | 240 | 281 | 177 | 236 | 284 | 382 | 356 | 300 | 256 | 193 | 190 | 272 | 220 | 182 | 254 | 314 |
Endoplasmic Reticulum | 0 | 1 | 0 | 0 | 0 | 1 | 3 | – | 2 | 3 | 3 | 0 | 0 | 0 | 0 | 12 | 15 | 8 | 0 | 0 | 2 | 0 | 3 | 4 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 5 | 2 | 0 | 1 | 2 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 1 | 1 |
Mitochondria | 2 | 6 | 1 | 5 | 1 | 13 | 45 | – | 94 | 77 | 110 | 69 | 2 | 2 | 1 | 8 | 4 | 0 | 2 | 5 | 6 | 6 | 10 | 10 |
Nucleus | 0 | 0 | 2 | 0 | 0 | 1 | 6 | – | 3 | 4 | 5 | 1 | 0 | 0 | 0 | 1 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 2 | 0 | 3 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 1 | 1 | 1 |
Vac/Vac Membrane | 0 | 2 | 1 | 0 | 0 | 0 | 3 | – | 3 | 4 | 3 | 1 | 0 | 0 | 0 | 6 | 7 | 3 | 0 | 5 | 2 | 2 | 5 | 6 |
Unique Cell Count | 200 | 292 | 240 | 128 | 277 | 254 | 387 | 295 | 335 | 251 | 275 | 286 | 384 | 357 | 307 | 267 | 198 | 200 | 295 | 248 | 202 | 292 | 364 | |
Labelled Cell Count | 204 | 300 | 247 | 131 | 281 | 267 | 431 | 354 | 381 | 303 | 319 | 288 | 385 | 360 | 332 | 287 | 215 | 200 | 295 | 248 | 202 | 292 | 364 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.6 | 4.3 | 5.0 | 4.4 | 5.3 | 4.2 | 4.5 | – | 3.9 | 3.9 | 3.5 | 4.1 | 4.7 | 4.7 | 4.9 | 6.3 | 6.5 | 6.3 | 4.4 | 4.6 | 4.8 |
Std Deviation (1e-4) | 0.4 | 0.7 | 1.1 | 1.0 | 1.3 | 0.8 | 1.1 | – | 0.7 | 0.8 | 0.8 | 0.7 | 1.1 | 1.1 | 1.3 | 0.8 | 1.3 | 1.0 | 1.2 | 1.3 | 1.5 |
Intensity Change (Log2) | – | – | – | -0.19 | 0.08 | -0.25 | -0.18 | – | -0.39 | -0.39 | -0.52 | -0.29 | -0.11 | -0.09 | -0.05 | 0.31 | 0.37 | 0.32 | -0.2 | -0.14 | -0.06 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.6537 | 2.3765 | 2.3131 | 2.7929 | 2.7376 | 2.4377 | -0.6495 | -0.1097 | -0.0846 | -0.0386 | -0.3674 | -0.2699 | -0.7994 | -0.0852 | -0.1443 | 0.1073 | -0.4755 | -0.3489 |
Actin | 0.0224 | 0.001 | 0.0114 | 0.0253 | 0.0027 | 0.0068 | 0.0321 | 0.0016 | 0.0234 | 0.0021 | 0.0014 | 0.0039 | 0.0032 | 0.0001 | 0.0188 | 0.0011 | 0.0004 | 0.0003 |
Bud | 0.0017 | 0.0015 | 0.0028 | 0.001 | 0.0022 | 0.0006 | 0.0065 | 0.0058 | 0.0035 | 0.0016 | 0.0002 | 0.0007 | 0.0007 | 0 | 0.0009 | 0.0004 | 0 | 0 |
Bud Neck | 0.0133 | 0.0007 | 0.0005 | 0.0049 | 0.0438 | 0.0073 | 0.0064 | 0.0004 | 0.0006 | 0.0014 | 0.0003 | 0.0005 | 0.0002 | 0 | 0.0087 | 0.0005 | 0.0139 | 0.0007 |
Bud Periphery | 0.0044 | 0.0025 | 0.0062 | 0.0019 | 0.0044 | 0.0004 | 0.0097 | 0.0122 | 0.0059 | 0.0025 | 0.0003 | 0.0014 | 0.0006 | 0 | 0.0025 | 0.0004 | 0 | 0 |
Bud Site | 0.014 | 0.0294 | 0.0033 | 0.0045 | 0.0025 | 0.001 | 0.0084 | 0.0148 | 0.0089 | 0.0009 | 0.0005 | 0.0009 | 0.0008 | 0.0001 | 0.0033 | 0.0035 | 0 | 0 |
Cell Periphery | 0.0012 | 0.0007 | 0.0002 | 0.001 | 0.0005 | 0.0001 | 0.0004 | 0.0007 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0 |
Cytoplasm | 0.0624 | 0.124 | 0.0914 | 0.0684 | 0.1669 | 0.2011 | 0.2086 | 0.3616 | 0.3104 | 0.3557 | 0.2701 | 0.4156 | 0.239 | 0.4294 | 0.4132 | 0.4762 | 0.364 | 0.4746 |
Cytoplasmic Foci | 0.0191 | 0.006 | 0.009 | 0.0072 | 0.036 | 0.0093 | 0.0197 | 0.0098 | 0.0152 | 0.0406 | 0.0269 | 0.0116 | 0.034 | 0.0047 | 0.0174 | 0.0078 | 0.0038 | 0.0045 |
Eisosomes | 0.0006 | 0.0003 | 0.0002 | 0.0003 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0.0003 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0028 | 0.0008 | 0.0074 | 0.0007 | 0.0079 | 0.0012 | 0.0051 | 0.0015 | 0.002 | 0.0012 | 0.0011 | 0.0013 | 0.0023 | 0.0007 | 0.0011 | 0.0014 | 0.0039 | 0.0043 |
Endosome | 0.0114 | 0.0009 | 0.0125 | 0.0069 | 0.0409 | 0.0036 | 0.0194 | 0.0017 | 0.0094 | 0.0264 | 0.0256 | 0.0054 | 0.0138 | 0.0015 | 0.0047 | 0.0024 | 0.0016 | 0.0015 |
Golgi | 0.0094 | 0.0003 | 0.007 | 0.0148 | 0.0055 | 0.0023 | 0.007 | 0.0003 | 0.0077 | 0.0032 | 0.0085 | 0.0024 | 0.002 | 0.0001 | 0.0025 | 0.0003 | 0.0001 | 0.0001 |
Lipid Particles | 0.0137 | 0.0004 | 0.0053 | 0.0156 | 0.0027 | 0.0011 | 0.0056 | 0.0002 | 0.0025 | 0.0039 | 0.007 | 0.003 | 0.0045 | 0.0001 | 0.005 | 0.0002 | 0.0001 | 0.0001 |
Mitochondria | 0.0107 | 0.0006 | 0.0166 | 0.0239 | 0.0608 | 0.0027 | 0.0056 | 0.0009 | 0.0209 | 0.001 | 0.0143 | 0.0042 | 0.0009 | 0.0001 | 0.0016 | 0.0002 | 0.0006 | 0.0008 |
None | 0.7651 | 0.8257 | 0.8048 | 0.7976 | 0.5927 | 0.7497 | 0.637 | 0.5759 | 0.5795 | 0.5463 | 0.6073 | 0.5386 | 0.6699 | 0.5616 | 0.5035 | 0.5012 | 0.5594 | 0.4982 |
Nuclear Periphery | 0.0033 | 0.0004 | 0.0027 | 0.0004 | 0.0091 | 0.0056 | 0.0053 | 0.0006 | 0.0009 | 0.0012 | 0.0071 | 0.0013 | 0.0051 | 0.0002 | 0.0009 | 0.0006 | 0.0085 | 0.002 |
Nucleolus | 0.0021 | 0.0002 | 0.0006 | 0.0043 | 0.0036 | 0.0001 | 0.0008 | 0.0004 | 0.0003 | 0.0002 | 0.0004 | 0.0003 | 0.0006 | 0 | 0.0028 | 0.0001 | 0.0005 | 0.0002 |
Nucleus | 0.0171 | 0.0009 | 0.0013 | 0.0007 | 0.0057 | 0.0022 | 0.0031 | 0.0034 | 0.0013 | 0.0019 | 0.0037 | 0.0028 | 0.0049 | 0.0005 | 0.0025 | 0.0012 | 0.0415 | 0.0106 |
Peroxisomes | 0.0131 | 0.0007 | 0.0124 | 0.0128 | 0.0029 | 0.0029 | 0.0071 | 0.0048 | 0.0034 | 0.0054 | 0.0142 | 0.0018 | 0.0033 | 0 | 0.0057 | 0.0001 | 0 | 0.0001 |
Punctate Nuclear | 0.008 | 0.0021 | 0.0021 | 0.0004 | 0.0023 | 0.0011 | 0.0085 | 0.0015 | 0.0015 | 0.0029 | 0.0088 | 0.0032 | 0.0058 | 0.0002 | 0.0033 | 0.001 | 0.0007 | 0.0013 |
Vacuole | 0.0032 | 0.0009 | 0.0016 | 0.0063 | 0.0052 | 0.0005 | 0.0021 | 0.0016 | 0.0018 | 0.0011 | 0.0014 | 0.0007 | 0.0058 | 0.0005 | 0.001 | 0.0012 | 0.0007 | 0.0004 |
Vacuole Periphery | 0.0008 | 0.0001 | 0.0007 | 0.001 | 0.0015 | 0.0003 | 0.0012 | 0.0002 | 0.0006 | 0.0003 | 0.0007 | 0.0002 | 0.0023 | 0.0001 | 0.0003 | 0.0002 | 0.0002 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 84.4396 | 87.0811 | 78.8097 | 57.0495 | 59.9039 | 52.774 | 56.1612 | 45.125 | 37.0355 | 55.1776 |
Translational Efficiency | 2.2129 | 2.2622 | 1.706 | 1.899 | 1.918 | 2.0204 | 1.8029 | 1.5712 | 1.5808 | 1.6758 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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