Standard name | |
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Human Ortholog | |
Description | Nucleolar protein; component of the small subunit (SSU) processome containing the U3 snoRNA that is involved in processing of pre-18S rRNA |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 1 | 2 | 5 | 7 | 6 | 3 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 2 | 4 | 0 | 0 | 2 |
Bud Neck | 1 | 1 | 3 | 0 | 1 | 4 | 3 | 5 | 1 | 1 | 1 | 5 | 3 | 0 | 0 | 1 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 2 |
Bud Site | 2 | 0 | 1 | 1 | 1 | 9 | 6 | 10 | 7 | 8 | 8 | 9 | 1 | 1 | 0 | 1 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 3 | 3 | 3 | 1 | 4 | 4 | 1 | 4 | 4 | 2 | 2 | 3 | 7 | 15 | 18 | 26 | 14 | 11 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 2 | 0 |
Endosome | 0 | 2 | 0 | 2 | 6 | 10 | 5 | 15 | 7 | 1 | 4 | 3 | 1 | 2 | 2 | 11 | 5 | 2 | 0 | 6 | 2 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Mitochondria | 34 | 32 | 27 | 15 | 26 | 54 | 48 | 60 | 40 | 56 | 27 | 54 | 12 | 6 | 4 | 62 | 19 | 35 | 0 | 1 | 1 | 0 | 1 | 1 |
Nucleus | 41 | 70 | 27 | 26 | 20 | 26 | 19 | 32 | 12 | 9 | 9 | 19 | 2 | 9 | 18 | 69 | 50 | 37 | 24 | 63 | 18 | 5 | 5 | 7 |
Nuclear Periphery | 2 | 1 | 0 | 1 | 1 | 2 | 2 | 0 | 1 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 3 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 201 | 299 | 185 | 139 | 180 | 263 | 228 | 403 | 144 | 205 | 134 | 181 | 106 | 122 | 133 | 594 | 336 | 321 | 167 | 262 | 153 | 37 | 118 | 69 |
Peroxisomes | 0 | 2 | 0 | 1 | 7 | 7 | 5 | 11 | 4 | 0 | 3 | 4 | 0 | 2 | 1 | 7 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 8 | 11 | 20 | 6 | 42 | 62 | 67 | 125 | 33 | 66 | 38 | 54 | 5 | 16 | 13 | 81 | 44 | 19 | 18 | 10 | 22 | 4 | 17 | 9 |
Vac/Vac Membrane | 0 | 4 | 1 | 0 | 1 | 0 | 1 | 4 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 7 | 3 | 4 | 0 | 2 | 2 | 1 | 6 | 5 |
Unique Cell Count | 218 | 339 | 201 | 153 | 208 | 307 | 261 | 462 | 179 | 236 | 156 | 221 | 118 | 144 | 165 | 684 | 383 | 353 | 216 | 354 | 207 | 53 | 157 | 102 |
Labelled Cell Count | 292 | 425 | 267 | 192 | 290 | 443 | 390 | 677 | 259 | 352 | 227 | 335 | 137 | 173 | 190 | 862 | 482 | 434 | 216 | 354 | 207 | 53 | 157 | 102 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 11.1 | 13.5 | 11.3 | 11.8 | 9.6 | 7.9 | 6.7 | 7.2 | 7.2 | 6.5 | 6.8 | 6.9 | 12.2 | 13.6 | 13.1 | 14.5 | 17.3 | 17.9 | 11.2 | 12.3 | 13.3 |
Std Deviation (1e-4) | 2.7 | 4.4 | 3.4 | 3.4 | 3.1 | 2.9 | 2.0 | 1.9 | 2.1 | 1.9 | 2.0 | 2.4 | 4.0 | 6.5 | 5.1 | 4.9 | 5.6 | 5.8 | 2.7 | 2.7 | 3.1 |
Intensity Change (Log2) | – | – | – | 0.07 | -0.23 | -0.5 | -0.75 | -0.64 | -0.66 | -0.79 | -0.72 | -0.7 | 0.11 | 0.28 | 0.22 | 0.37 | 0.62 | 0.67 | -0.01 | 0.12 | 0.24 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.7 | 3.9 | 1.6 | 1.5 | 1.2 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | -1.0 | -0.3 | 1.3 | 1.4 | -0.2 | 2.3 | 2.7 | 1.0 | 2.9 | -0.9 | -2.9 | -3.8 | -1.8 | -3.6 | -1.3 |
Nucleus | 0.9 | -1.2 | -1.8 | -2.2 | -2.7 | -2.2 | -3.6 | -2.4 | -1.6 | -3.5 | -2.2 | -0.7 | -1.3 | -0.1 | -1.0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | -0.4 | -1.8 | -2.2 | -1.6 | -1.8 | -3.3 | -1.7 | -1.9 | -3.1 | -0.7 | -2.1 | -3.2 | -2.0 | -1.6 | -0.4 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | -2.2 | 2.9 | 3.1 | 4.3 | 4.9 | 2.4 | 4.7 | 3.7 | 3.9 | -1.8 | 0.3 | -0.7 | 0.7 | 0.6 | -2.0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 12.9015 | 14.004 | 12.1579 | 11.8228 | 11.0488 | 11.8594 | 15.9919 | 16.1759 | 14.1118 | 12.1048 | 13.6573 | 14.3158 | 12.4606 | 17.3829 | 15.5774 | 16.4049 | 15.0581 | 15.5261 |
Actin | 0 | 0 | 0 | 0 | 0 | 0 | 0.0034 | 0 | 0.0014 | 0.0023 | 0 | 0.0002 | 0.0603 | 0 | 0.0421 | 0 | 0 | 0.004 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.001 | 0.0001 | 0.0002 | 0.0001 | 0 | 0 |
Bud Neck | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0014 | 0.0001 | 0.0002 | 0.0002 | 0.0031 | 0.0001 | 0.0015 | 0.0001 | 0.0004 | 0.0003 | 0.0001 | 0.0001 |
Bud Periphery | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0015 | 0.0001 | 0.0002 | 0.0002 | 0 | 0 |
Bud Site | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0052 | 0 | 0.0006 | 0.0003 | 0.0003 | 0 | 0.0031 | 0.0002 | 0.0006 | 0.0002 | 0.0001 | 0.0001 |
Cell Periphery | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0.001 | 0.0004 | 0.0002 | 0.0002 | 0.0001 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | 0 | 0 | 0.002 | 0 | 0.0002 | 0.0001 | 0 | 0.0007 | 0.0507 | 0 | 0.0026 | 0 | 0.0002 | 0.0001 |
Cytoplasmic Foci | 0.0001 | 0 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0134 | 0 | 0.006 | 0.0068 | 0.0053 | 0.0029 | 0.0486 | 0.0003 | 0.0042 | 0.0004 | 0.0287 | 0.001 |
Eisosomes | 0 | 0 | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0006 | 0 | 0.0002 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0.0013 | 0 | 0.0001 | 0.0003 | 0 | 0.0003 | 0.0066 | 0 | 0.0023 | 0 | 0 | 0.0001 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0.015 | 0 | 0.0036 | 0.019 | 0.0001 | 0.0024 | 0.0219 | 0.0001 | 0.015 | 0 | 0.0001 | 0.0008 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0.0039 | 0 | 0.0037 | 0.0212 | 0.0001 | 0.001 | 0.0046 | 0 | 0.0116 | 0 | 0 | 0.0005 |
Lipid Particles | 0.0002 | 0 | 0.0006 | 0.0003 | 0.0002 | 0.0002 | 0.0181 | 0.0001 | 0.0062 | 0.0179 | 0.0044 | 0.0034 | 0.0114 | 0.0004 | 0.0051 | 0.0006 | 0.0026 | 0.0013 |
Mitochondria | 0.0005 | 0.0003 | 0.0002 | 0.0001 | 0.0004 | 0.0001 | 0.0035 | 0.0001 | 0.0004 | 0.0238 | 0.0015 | 0.0006 | 0.0066 | 0.0021 | 0.0051 | 0.0003 | 0.0015 | 0.0001 |
None | 0 | 0 | 0 | 0 | 0 | 0 | 0.0009 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0019 | 0.0205 | 0.0001 | 0.0011 | 0 | 0.0007 | 0.0003 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0052 | 0 | 0.0003 | 0.0005 | 0.0004 | 0.0012 | 0.0115 | 0.0001 | 0.0011 | 0.0001 | 0.0001 | 0.0008 |
Nucleolus | 0.8793 | 0.8946 | 0.9219 | 0.9452 | 0.8694 | 0.9083 | 0.8253 | 0.862 | 0.8431 | 0.7894 | 0.8699 | 0.8911 | 0.5432 | 0.8689 | 0.7094 | 0.8572 | 0.8898 | 0.8527 |
Nucleus | 0.1191 | 0.1043 | 0.074 | 0.0533 | 0.1289 | 0.0905 | 0.0854 | 0.1372 | 0.1307 | 0.1055 | 0.0993 | 0.0893 | 0.1013 | 0.1234 | 0.1908 | 0.138 | 0.0688 | 0.1312 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0.0038 | 0 | 0.0016 | 0.0043 | 0.0003 | 0.0001 | 0.0041 | 0.0001 | 0.0048 | 0 | 0.0002 | 0.0009 |
Punctate Nuclear | 0.0002 | 0.0001 | 0.002 | 0.0005 | 0.0004 | 0.0003 | 0.0081 | 0.0004 | 0.0011 | 0.0028 | 0.0143 | 0.0042 | 0.0823 | 0.0004 | 0.0022 | 0.0012 | 0.0065 | 0.0056 |
Vacuole | 0.0001 | 0.0002 | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0.0021 | 0.0001 | 0.0003 | 0.002 | 0.0002 | 0.0002 | 0.0102 | 0.0015 | 0.0006 | 0.0006 | 0.0002 | 0.0001 |
Vacuole Periphery | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0.001 | 0 | 0.0001 | 0.0029 | 0.0002 | 0.0003 | 0.0072 | 0.0019 | 0.0005 | 0.0003 | 0.0002 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 51.8786 | 37.101 | 34.6506 | 42.9118 | 37.5744 | 27.1765 | 32.0153 | 27.5013 | 26.774 | 43.5213 |
Translational Efficiency | 0.8837 | 1.1762 | 1.2133 | 0.9137 | 1.1295 | 1.3322 | 1.0462 | 0.8886 | 0.8345 | 0.8043 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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