Standard name
Human Ortholog
Description Protein of unknown function; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; mutant shows increased resistance to azoles; not an essential gene; YMR102C has a paralog, DGR2, that arose from the whole genome duplication

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.23 0.2 0.15 0.18 0.23 0.15
Bud 0 0 0 0 0 0 0 0 0 0.05 0.05 0.08 0.06 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.08 0 0 0 0.07
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0.08 0.07 0.05 0.09 0.05 0 0 0 0 0 0 0 0.08 0.15 0.11 0 0.11 0.13 0.17 0.17 0.19 0.12
Cytoplasm 0.92 0.95 0.96 0.97 0.93 0.94 0.88 0.89 0.84 0.8 0.71 0.76 0.96 0.97 0.97 1.0 0.5 0.46 0.41 0.48 0.39 0.49
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0.09 0.13 0.07 0.29 0.3 0.38 0.3 0 0 0 0 0.05 0.07 0.14 0.07 0.08 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 4 6 6 1 5 1 6 3 1 1 0 1 5 3 2 0 34 57 52 40 61 41
Bud 3 7 6 2 4 3 10 11 10 14 11 20 15 1 6 0 0 0 3 1 1 7
Bud Neck 0 0 3 2 1 1 5 8 2 3 0 1 0 0 0 0 3 22 14 8 10 19
Bud Site 0 0 0 0 0 1 0 0 0 2 2 0 0 0 0 0
Cell Periphery 10 17 19 18 14 9 9 7 8 6 1 7 21 47 40 0 16 38 58 38 52 31
Cytoplasm 118 245 337 194 257 247 333 288 254 226 156 199 258 305 339 20 73 135 140 111 105 132
Endoplasmic Reticulum 2 2 2 0 4 1 1 1 0 0 1 0 1 5 2 0 4 5 7 2 5 7
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 2 5 3 1 3 3
Golgi 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2
Mitochondria 3 0 2 3 11 23 49 23 88 84 83 78 1 0 0 0 7 20 48 16 21 11
Nucleus 0 0 2 4 3 3 4 9 4 6 7 0 0 0 0 0 0 0 1 0 0 0
Nuclear Periphery 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1
Nucleolus 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 2 0 2 1 2 6 0 2 5 4 1 1 0 0 0 0 1 0 0 0
Vac/Vac Membrane 0 0 0 1 1 1 2 0 1 1 0 5 1 0 0 0 1 2 2 4 5 5
Unique Cell Count 128 257 350 199 276 264 379 325 301 282 221 262 270 315 348 20 147 296 343 231 272 269
Labelled Cell Count 140 277 380 225 303 291 422 356 369 347 266 315 304 362 392 20 147 296 343 231 272 269


Ambiguous

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 5.1 4.8 5.5 5.5 5.7 4.5 4.5 4.7 3.9 3.9 3.8 4.1 5.3 5.8 5.8 7.6 4.8 4.7 5.5
Std Deviation (1e-4) 0.6 0.6 1.2 2.0 1.7 1.7 1.3 1.5 1.4 1.4 1.4 1.1 1.0 1.2 1.2 1.1 1.4 0.9 1.9
Intensity Change (Log2) -0.01 0.05 -0.28 -0.28 -0.22 -0.49 -0.49 -0.54 -0.42 -0.07 0.06 0.08 0.47 -0.19 -0.22 0.01


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud
Bud Neck
Bud Site
Cell Periphery
Cyto
Endoplasmic Reticulum
Endosome
Golgi
Mitochondria
Nuclear Periphery
Nuc
Nucleolus
Peroxisomes
SpindlePole
Vac
Cortical Patches
Cytoplasm
Nucleus
Vacuole

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 3.0814 3.9588 3.584 3.152 2.872 3.4261 1.7137 2.1268 1.6923 0.8579 3.0603 1.6157 1.529 1.8441 1.6058 1.483 1.3039 1.6264
Actin 0.0841 0.0695 0.0607 0.0981 0.0761 0.0568 0.1238 0.0677 0.1196 0.0895 0.1101 0.1298 0.0833 0.0528 0.0736 0.1303 0.073 0.0573
Bud 0.0016 0.0009 0.0006 0.0018 0.0005 0.0005 0.0058 0.0032 0.0044 0.0008 0.0026 0.0026 0.0029 0.0009 0.0027 0.0036 0.0055 0.0005
Bud Neck 0.0245 0.0089 0.018 0.0444 0.0861 0.0706 0.013 0.0081 0.0388 0.1355 0.0195 0.0449 0.022 0.0072 0.0264 0.0838 0.0301 0.0457
Bud Periphery 0.0031 0.0019 0.0017 0.0065 0.0014 0.0025 0.0118 0.0054 0.0091 0.0024 0.0055 0.0074 0.0086 0.0019 0.0075 0.0115 0.0112 0.0021
Bud Site 0.0372 0.1023 0.0278 0.0098 0.0037 0.0025 0.0396 0.1814 0.0566 0.0234 0.0066 0.0035 0.0128 0.0967 0.0273 0.0202 0.0102 0.0011
Cell Periphery 0.0195 0.0332 0.0234 0.0199 0.0292 0.0216 0.0172 0.0307 0.0246 0.0169 0.0181 0.0135 0.0158 0.0164 0.0151 0.0176 0.0064 0.0072
Cytoplasm 0.4131 0.6195 0.6263 0.6182 0.7465 0.7301 0.5392 0.6086 0.6057 0.6118 0.3836 0.6754 0.5333 0.6728 0.6768 0.5755 0.5844 0.683
Cytoplasmic Foci 0.0682 0.0065 0.0167 0.026 0.0079 0.0092 0.0295 0.0077 0.0174 0.0186 0.0486 0.0149 0.0244 0.0113 0.0152 0.0115 0.0741 0.0159
Eisosomes 0.0024 0.0021 0.0014 0.0019 0.0007 0.0013 0.003 0.0024 0.0026 0.0007 0.0017 0.002 0.0026 0.0009 0.0013 0.001 0.0004 0.0006
Endoplasmic Reticulum 0.0075 0.0043 0.0058 0.0054 0.0037 0.0033 0.019 0.0048 0.0064 0.0097 0.0088 0.0043 0.0107 0.0052 0.0048 0.0069 0.0095 0.0042
Endosome 0.0352 0.0003 0.0059 0.0189 0.0003 0.0004 0.0316 0.0012 0.0078 0.0041 0.1069 0.0056 0.0253 0.0009 0.0032 0.0028 0.011 0.0045
Golgi 0.018 0.0014 0.0071 0.0253 0.0011 0.0013 0.0186 0.0024 0.008 0.0076 0.0557 0.007 0.0076 0.002 0.0038 0.003 0.0098 0.0038
Lipid Particles 0.0405 0.0009 0.0048 0.0147 0.0005 0.0005 0.0126 0.0011 0.0041 0.0055 0.0268 0.0059 0.0096 0.0011 0.0032 0.0026 0.0094 0.0038
Mitochondria 0.0215 0.0001 0.0087 0.0441 0.0001 0.0002 0.017 0.0002 0.0107 0.0048 0.0378 0.0023 0.0036 0.0002 0.0012 0.0129 0.0048 0.0008
None 0.1528 0.146 0.1832 0.0433 0.0408 0.0973 0.0764 0.07 0.0725 0.0571 0.035 0.0725 0.1967 0.126 0.1247 0.1013 0.1025 0.1621
Nuclear Periphery 0.0126 0.0003 0.0004 0.0021 0.0001 0.0001 0.0099 0.0005 0.0011 0.001 0.037 0.001 0.0089 0.0003 0.002 0.0005 0.0074 0.0005
Nucleolus 0.0048 0.0001 0.0002 0.0007 0.0001 0.0001 0.0008 0.0005 0.0006 0.0002 0.0024 0.0005 0.0017 0.0002 0.0006 0.0002 0.0007 0.0001
Nucleus 0.0058 0.0004 0.0006 0.0014 0.0004 0.0004 0.0115 0.001 0.0016 0.0012 0.0302 0.0016 0.0043 0.0006 0.002 0.001 0.0142 0.0005
Peroxisomes 0.0302 0.0005 0.0037 0.0097 0.0004 0.0006 0.0089 0.0007 0.0034 0.0058 0.0337 0.0025 0.0072 0.0009 0.0048 0.0122 0.0193 0.0044
Punctate Nuclear 0.0062 0.0003 0.0005 0.0014 0.0002 0.0002 0.0045 0.0007 0.0025 0.0025 0.0108 0.0017 0.0133 0.0008 0.0029 0.0008 0.0138 0.0015
Vacuole 0.0085 0.0005 0.0021 0.0043 0.0003 0.0004 0.0049 0.0017 0.0023 0.0008 0.0119 0.0008 0.0039 0.0008 0.0009 0.0008 0.0019 0.0004
Vacuole Periphery 0.0029 0 0.0004 0.0022 0 0 0.0013 0.0001 0.0005 0.0002 0.0068 0.0003 0.0012 0 0.0001 0.0001 0.0004 0.0001

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 12.3335 16.538 19.5767 25.1488 16.8475 20.6911 24.6843 28.618 26.5804 27.7037
Translational Efficiency 0.8796 0.7976 0.732 0.5885 0.6608 0.821 0.6248 0.6268 0.7173 0.5588

Hit Data

Dataset Hit
Protein Concentration
Protein Localization
Gene Expression
Translational Efficiency
Standard name
Human Ortholog
Description Protein of unknown function; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; mutant shows increased resistance to azoles; not an essential gene; YMR102C has a paralog, DGR2, that arose from the whole genome duplication
Localization
Cell Percentages cytoplasm (26%), ER (3%), mixed (57%)
Cell Cycle Regulation No
Subcompartmental Group N/A

Laf1

Laf1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)

Molecular Function (Gene Ontology)

Cellular Component (Gene Ontology)


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Laf1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available