Standard name | |
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Human Ortholog | |
Description | Subunit of the mitochondrial (mt) i-AAA protease supercomplex; i-AAA degrades misfolded mitochondrial proteins; forms a subcomplex with Mgr1p that binds to substrates to facilitate proteolysis; required for growth of cells lacking mtDNA |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 2 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 4 | 0 | 0 | – | 0 | – | 5 | 5 | 6 | 4 | 13 | 26 |
Bud | 3 | 7 | 10 | 8 | 11 | 13 | 18 | 24 | 18 | 15 | 19 | 21 | 7 | 8 | 11 | – | 2 | – | 0 | 5 | 1 | 2 | 3 | 9 |
Bud Neck | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | – | 0 | 4 | 4 | 1 | 3 | 10 |
Bud Site | 1 | 0 | 1 | 1 | 0 | 4 | 5 | 8 | 7 | 5 | 4 | 9 | 1 | 0 | 1 | – | 0 | – | – | – | – | – | – | – |
Cell Periphery | 1 | 2 | 3 | 0 | 2 | 0 | 2 | 1 | 0 | 3 | 1 | 5 | 1 | 6 | 4 | – | 1 | – | 1 | 0 | 0 | 0 | 0 | 2 |
Cytoplasm | 54 | 63 | 72 | 45 | 52 | 35 | 53 | 68 | 26 | 28 | 22 | 18 | 49 | 97 | 148 | – | 7 | – | 12 | 19 | 12 | 6 | 8 | 12 |
Endoplasmic Reticulum | 15 | 9 | 4 | 2 | 1 | 4 | 5 | 3 | 4 | 4 | 0 | 3 | 4 | 6 | 6 | – | 2 | – | 3 | 3 | 3 | 3 | 1 | 5 |
Endosome | 0 | 2 | 0 | 2 | 8 | 2 | 1 | 1 | 0 | 0 | 0 | 0 | 15 | 40 | 56 | – | 8 | – | 27 | 13 | 16 | 24 | 22 | 41 |
Golgi | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | – | 1 | – | 1 | 2 | 2 | 1 | 5 | 4 |
Mitochondria | 214 | 120 | 90 | 111 | 118 | 235 | 342 | 374 | 246 | 374 | 280 | 401 | 101 | 111 | 82 | – | 8 | – | 185 | 131 | 123 | 101 | 135 | 163 |
Nucleus | 0 | 1 | 1 | 0 | 0 | 2 | 2 | 9 | 3 | 3 | 3 | 3 | 0 | 2 | 5 | – | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 2 | 1 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 13 | 3 | 5 | 0 | 0 | 0 | – | 0 | – | 2 | 3 | 0 | 0 | 1 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | – | 0 | – | 1 | 0 | 0 | 0 | 1 | 0 |
Peroxisomes | 1 | 0 | 0 | 4 | 6 | 1 | 4 | 4 | 0 | 0 | 1 | 2 | 21 | 35 | 31 | – | 3 | – | 11 | 2 | 5 | 12 | 22 | 12 |
SpindlePole | 4 | 2 | 6 | 8 | 12 | 11 | 21 | 39 | 7 | 10 | 18 | 18 | 6 | 15 | 6 | – | 5 | – | 9 | 3 | 5 | 4 | 9 | 12 |
Vac/Vac Membrane | 8 | 19 | 6 | 2 | 11 | 9 | 8 | 10 | 3 | 7 | 12 | 11 | 16 | 16 | 16 | – | 7 | – | 7 | 23 | 14 | 4 | 4 | 11 |
Unique Cell Count | 252 | 178 | 159 | 151 | 185 | 270 | 379 | 443 | 265 | 399 | 298 | 414 | 177 | 289 | 308 | 34 | 277 | 221 | 200 | 173 | 237 | 323 | ||
Labelled Cell Count | 305 | 228 | 196 | 185 | 223 | 316 | 466 | 543 | 317 | 464 | 364 | 497 | 226 | 337 | 367 | 45 | 277 | 221 | 200 | 173 | 237 | 323 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.3 | 3.8 | 3.4 | 3.4 | 3.7 | 3.1 | 2.7 | 3.0 | 3.0 | 2.7 | 3.0 | 2.8 | 4.6 | 4.6 | 4.6 | 4.4 | 5.6 | – | 4.3 | 4.4 | 5.1 |
Std Deviation (1e-4) | 0.4 | 0.7 | 0.9 | 0.9 | 1.2 | 1.1 | 0.5 | 0.6 | 0.9 | 0.6 | 1.0 | 0.9 | 1.3 | 1.2 | 1.5 | 1.3 | 1.7 | – | 1.4 | 1.7 | 2.0 |
Intensity Change (Log2) | – | – | – | -0.01 | 0.11 | -0.17 | -0.33 | -0.18 | -0.2 | -0.33 | -0.19 | -0.32 | 0.43 | 0.41 | 0.41 | 0.34 | 0.69 | – | 0.33 | 0.36 | 0.56 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.1394 | 2.7216 | 2.5157 | 2.3637 | 1.7696 | 2.4351 | 0.7172 | 1.2935 | 1.0344 | 1.0182 | 0.8242 | 0.986 | 1.6332 | 1.8611 | 1.8444 | 1.3072 | 1.5683 | 1.6113 |
Actin | 0.0961 | 0.0664 | 0.0507 | 0.0078 | 0.0138 | 0.0369 | 0.0339 | 0.0543 | 0.0356 | 0.044 | 0.0262 | 0.0333 | 0.1705 | 0.0507 | 0.0362 | 0.0007 | 0.03 | 0.0537 |
Bud | 0.0007 | 0.003 | 0.0021 | 0.0076 | 0.0004 | 0.0005 | 0.0008 | 0.0003 | 0.0009 | 0.0005 | 0.0005 | 0.0003 | 0.0026 | 0.0007 | 0.0035 | 0.0005 | 0.0007 | 0.0007 |
Bud Neck | 0.0024 | 0.0028 | 0.0077 | 0.0008 | 0.0009 | 0.0233 | 0.0062 | 0.0042 | 0.0038 | 0.0052 | 0.0006 | 0.0013 | 0.0033 | 0.0006 | 0.0061 | 0.0002 | 0.0006 | 0.0015 |
Bud Periphery | 0.0011 | 0.0039 | 0.0047 | 0.0301 | 0.0007 | 0.001 | 0.002 | 0.0005 | 0.0021 | 0.0011 | 0.0009 | 0.0005 | 0.0032 | 0.0008 | 0.0053 | 0.0005 | 0.0012 | 0.0024 |
Bud Site | 0.0044 | 0.0568 | 0.0172 | 0.0014 | 0.001 | 0.001 | 0.0064 | 0.029 | 0.0143 | 0.0014 | 0.0005 | 0.0005 | 0.0171 | 0.0216 | 0.0217 | 0.0007 | 0.0017 | 0.0008 |
Cell Periphery | 0.0004 | 0.0013 | 0.0032 | 0.0008 | 0.0002 | 0.0005 | 0.0098 | 0.0003 | 0.0026 | 0.0004 | 0.0001 | 0.0003 | 0.0004 | 0.0002 | 0.0006 | 0.0001 | 0.001 | 0.0003 |
Cytoplasm | 0.0041 | 0.0158 | 0.0065 | 0.0017 | 0.0006 | 0.0015 | 0.0052 | 0.0035 | 0.006 | 0.0014 | 0.0035 | 0.0018 | 0.0142 | 0.0012 | 0.0035 | 0.0164 | 0.0067 | 0.0141 |
Cytoplasmic Foci | 0.123 | 0.0723 | 0.0633 | 0.0449 | 0.0477 | 0.0559 | 0.103 | 0.0516 | 0.0584 | 0.0732 | 0.0783 | 0.0499 | 0.0878 | 0.0478 | 0.0583 | 0.021 | 0.0722 | 0.0611 |
Eisosomes | 0.0009 | 0.0009 | 0.001 | 0.001 | 0.0003 | 0.0005 | 0.0024 | 0.0005 | 0.002 | 0.0013 | 0.0002 | 0.0007 | 0.0021 | 0.0004 | 0.001 | 0.0001 | 0.0009 | 0.001 |
Endoplasmic Reticulum | 0.0036 | 0.0006 | 0.0023 | 0.0006 | 0.0003 | 0.0005 | 0.0044 | 0.0009 | 0.0009 | 0.0001 | 0.0057 | 0.0003 | 0.0013 | 0.0006 | 0.0005 | 0.001 | 0.0014 | 0.0005 |
Endosome | 0.124 | 0.0549 | 0.0763 | 0.0748 | 0.0765 | 0.0662 | 0.0929 | 0.0493 | 0.0457 | 0.038 | 0.1007 | 0.0343 | 0.0389 | 0.0491 | 0.0743 | 0.1479 | 0.0423 | 0.0567 |
Golgi | 0.0822 | 0.0718 | 0.0767 | 0.1371 | 0.1087 | 0.1032 | 0.07 | 0.0758 | 0.0497 | 0.0835 | 0.0788 | 0.069 | 0.094 | 0.0406 | 0.0991 | 0.0164 | 0.1503 | 0.1031 |
Lipid Particles | 0.1071 | 0.0234 | 0.05 | 0.0669 | 0.0468 | 0.0847 | 0.1192 | 0.0413 | 0.0284 | 0.039 | 0.0411 | 0.0642 | 0.0268 | 0.0433 | 0.0468 | 0.0026 | 0.0164 | 0.0497 |
Mitochondria | 0.1959 | 0.4118 | 0.4293 | 0.5002 | 0.593 | 0.4538 | 0.2596 | 0.3432 | 0.4473 | 0.4368 | 0.2829 | 0.454 | 0.1431 | 0.5426 | 0.3714 | 0.7133 | 0.4674 | 0.3599 |
None | 0.0106 | 0.0237 | 0.0127 | 0.0228 | 0.0004 | 0.0005 | 0.0096 | 0.0236 | 0.0208 | 0.0242 | 0.0028 | 0.0131 | 0.0061 | 0.0004 | 0.0327 | 0.0027 | 0.0958 | 0.0019 |
Nuclear Periphery | 0.0028 | 0.0002 | 0.0063 | 0.0004 | 0.0002 | 0.0003 | 0.0054 | 0.0014 | 0.0003 | 0.0001 | 0.0076 | 0.0003 | 0.0244 | 0.0003 | 0.0003 | 0.0008 | 0.0003 | 0.0005 |
Nucleolus | 0.0006 | 0.0007 | 0.001 | 0.0008 | 0.0002 | 0.0004 | 0.0017 | 0.0005 | 0.001 | 0.0014 | 0.0002 | 0.0003 | 0.0009 | 0.0002 | 0.001 | 0.0003 | 0.001 | 0.0001 |
Nucleus | 0.0008 | 0.0004 | 0.0013 | 0.0005 | 0.0002 | 0.0003 | 0.001 | 0.0002 | 0.0005 | 0.0005 | 0.0011 | 0.0002 | 0.0618 | 0.0001 | 0.0005 | 0.0006 | 0.0007 | 0.0003 |
Peroxisomes | 0.2237 | 0.1836 | 0.1783 | 0.0888 | 0.0998 | 0.1566 | 0.2435 | 0.3148 | 0.2719 | 0.2451 | 0.3627 | 0.2717 | 0.2925 | 0.1905 | 0.2262 | 0.0092 | 0.1042 | 0.2762 |
Punctate Nuclear | 0.0059 | 0.0004 | 0.0013 | 0.0006 | 0.0004 | 0.0005 | 0.0062 | 0.0005 | 0.0018 | 0.0013 | 0.002 | 0.0006 | 0.0067 | 0.0003 | 0.0059 | 0.0002 | 0.0005 | 0.0004 |
Vacuole | 0.0063 | 0.0038 | 0.0048 | 0.0065 | 0.0029 | 0.0068 | 0.014 | 0.0017 | 0.0042 | 0.0008 | 0.0016 | 0.0016 | 0.0013 | 0.0059 | 0.0034 | 0.0556 | 0.003 | 0.0075 |
Vacuole Periphery | 0.0035 | 0.0017 | 0.0031 | 0.0036 | 0.0051 | 0.0051 | 0.0027 | 0.0027 | 0.0016 | 0.0007 | 0.002 | 0.0018 | 0.001 | 0.0021 | 0.0018 | 0.0092 | 0.0017 | 0.0075 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 20.8812 | 21.6138 | 20.8985 | 21.0308 | 16.149 | 18.3067 | 20.8604 | 23.0186 | 25.4309 | 17.1391 |
Translational Efficiency | 1.0315 | 0.8181 | 0.8664 | 0.9515 | 0.9839 | 1.0686 | 0.9371 | 0.8411 | 0.7729 | 1.0279 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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