Standard name | |
---|---|
Human Ortholog | |
Description | V-ATPase assembly factor; functions with other V-ATPase assembly factors in the ER to efficiently assemble the V-ATPase membrane sector (V0); protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 16 | 4 | 9 | 12 | 14 | 11 | – | 30 | 38 | 41 | 33 | 24 | 22 | 19 | 11 | 2 | 2 | 2 | 12 | 1 | 2 | 2 | 10 | 4 |
Bud | 5 | 0 | 8 | 0 | 3 | 2 | – | 7 | 2 | 4 | 5 | 5 | 0 | 0 | 0 | 0 | 1 | 1 | 4 | 0 | 0 | 0 | 2 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 24 | 12 | 15 | 39 | 23 | 12 | – | 22 | 29 | 42 | 39 | 20 | 64 | 92 | 82 | 17 | 20 | 18 | 5 | 3 | 2 | 2 | 4 | 8 |
Cytoplasm | 68 | 11 | 13 | 12 | 21 | 25 | – | 40 | 33 | 52 | 38 | 39 | 13 | 19 | 19 | 7 | 12 | 9 | 19 | 2 | 1 | 3 | 6 | 7 |
Endoplasmic Reticulum | 817 | 251 | 239 | 166 | 217 | 228 | – | 206 | 230 | 247 | 146 | 135 | 371 | 291 | 292 | 0 | 1 | 0 | 907 | 252 | 265 | 249 | 350 | 425 |
Endosome | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 |
Golgi | 2 | 2 | 0 | 1 | 6 | 1 | – | 2 | 1 | 3 | 2 | 1 | 20 | 5 | 4 | 12 | 25 | 31 | 1 | 0 | 1 | 2 | 1 | 2 |
Mitochondria | 4 | 0 | 11 | 40 | 15 | 39 | – | 40 | 79 | 58 | 82 | 54 | 0 | 5 | 0 | 0 | 6 | 0 | 4 | 1 | 3 | 2 | 4 | 3 |
Nucleus | 1 | 0 | 0 | 0 | 0 | 1 | – | 3 | 1 | 2 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 5 | 1 | 17 | 15 | 20 | 35 | – | 10 | 35 | 21 | 10 | 12 | 9 | 17 | 12 | 0 | 0 | 0 | 5 | 1 | 0 | 1 | 2 | 1 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 41 | 2 | 17 | 2 | 6 | 7 | – | 31 | 21 | 44 | 10 | 17 | 6 | 0 | 3 | 14 | 15 | 17 | 7 | 1 | 2 | 3 | 5 | 11 |
Unique Cell Count | 905 | 261 | 273 | 210 | 251 | 291 | 336 | 350 | 411 | 278 | 240 | 417 | 355 | 347 | 46 | 68 | 67 | 974 | 267 | 284 | 270 | 391 | 473 | |
Labelled Cell Count | 983 | 283 | 329 | 287 | 325 | 362 | 392 | 470 | 514 | 366 | 308 | 506 | 448 | 423 | 52 | 83 | 78 | 974 | 267 | 284 | 270 | 391 | 473 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 24.6 | 29.7 | 14.6 | 18.2 | 16.6 | 13.9 | – | 13.8 | 12.8 | 13.4 | 12.5 | 12.5 | 24.5 | 24.6 | 22.5 | 36.8 | 35.5 | 37.1 | 25.3 | 25.0 | 25.5 |
Std Deviation (1e-4) | 4.9 | 5.3 | 3.1 | 3.4 | 3.1 | 2.5 | – | 3.0 | 2.5 | 2.4 | 2.4 | 2.5 | 4.7 | 4.4 | 4.0 | 10.0 | 8.7 | 9.1 | 4.9 | 4.8 | 4.7 |
Intensity Change (Log2) | – | – | – | 0.32 | 0.19 | -0.07 | – | -0.07 | -0.19 | -0.13 | -0.22 | -0.23 | 0.75 | 0.76 | 0.63 | 1.34 | 1.28 | 1.35 | 0.8 | 0.78 | 0.81 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 1.3 | 1.3 | 0.3 | – | 2.8 | 3.5 | 3.3 | 3.8 | 3.1 | 1.2 | 1.2 | -0.1 | 0 | 0 | 0 |
Bud | 0 | -1.4 | 0 | – | -0.7 | 0 | 0 | -0.9 | -0.6 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 4.5 | 1.6 | -0.8 | – | 0.5 | 1.3 | 2.2 | 3.4 | 1.3 | 4.0 | 6.7 | 6.2 | 0 | 5.8 | 5.3 |
Cytoplasm | 0.5 | 1.7 | 1.8 | – | 3.1 | 2.2 | 3.4 | 3.6 | 4.3 | -1.1 | 0.3 | 0.4 | 0 | 0 | 0 |
Endoplasmic Reticulum | -2.5 | -0.4 | -2.9 | – | -7.3 | -6.3 | -7.8 | -9.0 | -8.0 | 0.6 | -1.9 | -1.2 | -12.7 | -13.9 | -14.1 |
Endosome | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 3.7 | 0 | 0 | 0 | 0 | 11.8 |
Mitochondria | 5.3 | 1.0 | 3.9 | – | 3.5 | 6.5 | 4.3 | 8.0 | 6.3 | 0 | -2.1 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0.4 | 0.8 | 2.4 | – | -1.9 | 1.7 | -0.6 | -1.4 | -0.6 | -2.7 | -0.8 | -1.6 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -3.0 | -2.1 | -2.2 | – | 1.4 | -0.1 | 2.0 | -1.4 | 0.4 | -3.4 | -4.8 | -3.8 | 0 | 4.0 | 4.7 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 23.2596 | 25.1018 | 24.7974 | 19.0763 | 21.763 | 24.7272 | 19.6048 | 22.3903 | 19.8102 | 20.9016 | 18.2723 | 21.2876 | 23.8156 | 26.9327 | 25.2773 | 24.5461 | 21.5176 | 25.0496 |
Actin | 0.0079 | 0.0011 | 0.0105 | 0.0073 | 0.0047 | 0.0012 | 0.0277 | 0.0003 | 0.0049 | 0.0007 | 0.0024 | 0.0009 | 0.0312 | 0.0019 | 0.0143 | 0.0014 | 0.0176 | 0.0014 |
Bud | 0.0003 | 0.0001 | 0.0002 | 0.0004 | 0.0004 | 0 | 0.0003 | 0 | 0.0004 | 0 | 0.0003 | 0 | 0.0004 | 0.0001 | 0.0003 | 0.0002 | 0.0008 | 0 |
Bud Neck | 0.0008 | 0.0003 | 0.0006 | 0.002 | 0.0018 | 0.0009 | 0.0005 | 0.0002 | 0.0004 | 0.0002 | 0.0003 | 0.0012 | 0.0033 | 0.0005 | 0.0005 | 0.0001 | 0.004 | 0.001 |
Bud Periphery | 0.0005 | 0.0002 | 0.0002 | 0.0008 | 0.0006 | 0.0002 | 0.0007 | 0.0001 | 0.0006 | 0 | 0.0007 | 0.0001 | 0.0006 | 0.0002 | 0.0003 | 0.0004 | 0.0015 | 0.0001 |
Bud Site | 0.0025 | 0.0005 | 0.0009 | 0.0017 | 0.0073 | 0.0001 | 0.0009 | 0.0003 | 0.0008 | 0 | 0.0009 | 0.0001 | 0.0058 | 0.0026 | 0.0055 | 0.0005 | 0.001 | 0 |
Cell Periphery | 0.0046 | 0.0089 | 0.0027 | 0.0035 | 0.0032 | 0.001 | 0.0062 | 0.0076 | 0.0048 | 0.001 | 0.003 | 0.0011 | 0.0023 | 0.0113 | 0.0052 | 0.0006 | 0.0146 | 0.0009 |
Cytoplasm | 0.0099 | 0.0269 | 0.024 | 0.0148 | 0.0034 | 0.0057 | 0.0087 | 0.0131 | 0.012 | 0.0016 | 0.0014 | 0.0081 | 0.0155 | 0.033 | 0.0246 | 0.0063 | 0.0041 | 0.0049 |
Cytoplasmic Foci | 0.0105 | 0.0004 | 0.0024 | 0.0044 | 0.004 | 0.0016 | 0.0095 | 0.0002 | 0.014 | 0.0004 | 0.0068 | 0.0014 | 0.0341 | 0.0003 | 0.0018 | 0.0026 | 0.0118 | 0 |
Eisosomes | 0.0009 | 0.0001 | 0.0001 | 0.0003 | 0.0004 | 0 | 0.0017 | 0 | 0.0002 | 0 | 0.0006 | 0.0001 | 0.0002 | 0 | 0.0002 | 0.0001 | 0.0004 | 0 |
Endoplasmic Reticulum | 0.7191 | 0.9276 | 0.9129 | 0.831 | 0.8935 | 0.9404 | 0.7878 | 0.9518 | 0.8665 | 0.9691 | 0.8251 | 0.9533 | 0.7372 | 0.9211 | 0.9275 | 0.8674 | 0.6946 | 0.948 |
Endosome | 0.0154 | 0.0005 | 0.0102 | 0.0237 | 0.0188 | 0.0042 | 0.0275 | 0.0003 | 0.0215 | 0.0076 | 0.0617 | 0.0027 | 0.0363 | 0.0005 | 0.004 | 0.0467 | 0.0208 | 0.001 |
Golgi | 0.0035 | 0.0003 | 0.0015 | 0.0065 | 0.0078 | 0.0024 | 0.009 | 0.0003 | 0.0094 | 0.0018 | 0.0169 | 0.0007 | 0.0105 | 0.0003 | 0.0015 | 0.0055 | 0.0347 | 0.0002 |
Lipid Particles | 0.0135 | 0.0101 | 0.0027 | 0.0141 | 0.0118 | 0.002 | 0.0124 | 0.0116 | 0.017 | 0.0011 | 0.026 | 0.0018 | 0.0173 | 0.0131 | 0.0013 | 0.0082 | 0.0842 | 0.0002 |
Mitochondria | 0.0052 | 0.0006 | 0.0037 | 0.0328 | 0.0074 | 0.0025 | 0.0152 | 0 | 0.0117 | 0.0001 | 0.0177 | 0.0055 | 0.0023 | 0 | 0.0014 | 0.0163 | 0.0472 | 0.0001 |
None | 0.0131 | 0.0001 | 0.0004 | 0.0023 | 0.0016 | 0.0001 | 0.0041 | 0 | 0.0045 | 0.0002 | 0.0007 | 0.0003 | 0.0047 | 0 | 0.0033 | 0.0016 | 0.0003 | 0 |
Nuclear Periphery | 0.1411 | 0.0139 | 0.0167 | 0.0276 | 0.0193 | 0.029 | 0.0589 | 0.0095 | 0.0115 | 0.0137 | 0.0133 | 0.0157 | 0.0532 | 0.011 | 0.0042 | 0.025 | 0.01 | 0.0355 |
Nucleolus | 0.0046 | 0 | 0.0003 | 0.0023 | 0.0009 | 0 | 0.0006 | 0 | 0.0002 | 0 | 0.0007 | 0.0001 | 0.0008 | 0 | 0 | 0.0004 | 0.0001 | 0 |
Nucleus | 0.0168 | 0.0009 | 0.0014 | 0.0056 | 0.0013 | 0.0024 | 0.0065 | 0.0007 | 0.0006 | 0.0003 | 0.0022 | 0.0009 | 0.0037 | 0.0006 | 0.0003 | 0.0028 | 0.0006 | 0.0022 |
Peroxisomes | 0.0047 | 0 | 0.0012 | 0.0014 | 0.0018 | 0.0012 | 0.0022 | 0 | 0.0042 | 0 | 0.0017 | 0.0003 | 0.0213 | 0 | 0.0002 | 0.0014 | 0.0412 | 0 |
Punctate Nuclear | 0.0101 | 0.0001 | 0.0005 | 0.0027 | 0.0004 | 0.0001 | 0.0059 | 0 | 0.0004 | 0.0001 | 0.0038 | 0.0028 | 0.0054 | 0.0001 | 0.0001 | 0.0009 | 0.0005 | 0 |
Vacuole | 0.0103 | 0.0059 | 0.0042 | 0.0093 | 0.008 | 0.0031 | 0.0097 | 0.0036 | 0.0121 | 0.0017 | 0.0077 | 0.0023 | 0.0114 | 0.0032 | 0.0031 | 0.0068 | 0.008 | 0.0036 |
Vacuole Periphery | 0.005 | 0.0014 | 0.0027 | 0.0056 | 0.0018 | 0.0018 | 0.004 | 0.0003 | 0.0024 | 0.0005 | 0.0061 | 0.0005 | 0.0024 | 0.0002 | 0.0003 | 0.0049 | 0.002 | 0.0009 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 77.7467 | 85.5394 | 67.441 | 83.0123 | 91.1094 | 80.6922 | 72.9749 | 90.2974 | 70.4637 | 82.35 |
Translational Efficiency | 1.5856 | 1.6338 | 1.8199 | 1.1613 | 1.1856 | 1.3238 | 1.5551 | 0.9466 | 1.3708 | 1.2735 |
Dataset | Hit |
---|---|
Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|