Standard name | |
---|---|
Human Ortholog | |
Description | Protein of unknown function; null mutant displays sensitivity to DNA damaging agents; may have a role in lipid metabolism, based on localization to lipid droplets; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 6 | 8 | 8 | 9 | 13 | 9 | 7 | 19 | 13 | 14 | 13 | 18 | 9 | 13 | – | – | – | 0 | 1 | 6 | 6 | 6 | 9 |
Bud | 0 | 0 | 3 | 2 | 5 | 17 | 30 | 29 | 22 | 20 | 25 | 18 | 2 | 0 | 0 | – | – | – | 0 | 0 | 0 | 2 | 4 | 3 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | 1 | 2 | 3 | 3 | 3 | 6 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 4 | 2 | 3 | 0 | 0 | 0 | – | – | – | – | – | – | – | – | – |
Cell Periphery | 0 | 6 | 5 | 10 | 16 | 9 | 13 | 4 | 8 | 9 | 5 | 5 | 21 | 26 | 34 | – | – | – | 0 | 0 | 2 | 2 | 4 | 7 |
Cytoplasm | 6 | 52 | 76 | 83 | 152 | 133 | 168 | 93 | 123 | 95 | 86 | 84 | 126 | 52 | 104 | – | – | – | 3 | 17 | 19 | 27 | 24 | 21 |
Endoplasmic Reticulum | 12 | 100 | 185 | 130 | 161 | 175 | 160 | 114 | 134 | 99 | 99 | 129 | 257 | 196 | 293 | – | – | – | 30 | 136 | 282 | 255 | 256 | 253 |
Endosome | 0 | 0 | 0 | 7 | 7 | 4 | 34 | 32 | 26 | 45 | 10 | 14 | 8 | 3 | 6 | – | – | – | 0 | 2 | 0 | 1 | 3 | 2 |
Golgi | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 5 | 3 | 5 | 1 | 1 | 6 | – | – | – | 0 | 0 | 0 | 2 | 4 | 5 |
Mitochondria | 0 | 0 | 23 | 39 | 67 | 118 | 265 | 248 | 286 | 291 | 370 | 458 | 2 | 0 | 0 | – | – | – | 0 | 0 | 9 | 16 | 11 | 9 |
Nucleus | 0 | 0 | 0 | 1 | 0 | 2 | 8 | 4 | 5 | 9 | 9 | 13 | 0 | 1 | 0 | – | – | – | 0 | 1 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 1 | 1 | 1 | 3 | 7 | 9 | 12 | 10 | 19 | 13 | 0 | 0 | 0 | – | – | – | 0 | 0 | 1 | 0 | 0 | 2 |
Nucleolus | 0 | 0 | 0 | 0 | 1 | 0 | 7 | 11 | 6 | 13 | 8 | 22 | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 6 | 0 | 0 | 0 | 0 | 0 | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 6 | 3 | 11 | 45 | 62 | 225 | 188 | 187 | 262 | 121 | 109 | 29 | 8 | 12 | – | – | – | 0 | 6 | 5 | 18 | 23 | 23 |
Unique Cell Count | 16 | 143 | 270 | 241 | 387 | 424 | 736 | 597 | 674 | 721 | 617 | 730 | 397 | 263 | 412 | 38 | 173 | 335 | 340 | 348 | 347 | |||
Labelled Cell Count | 18 | 171 | 305 | 293 | 464 | 536 | 926 | 744 | 829 | 882 | 771 | 886 | 464 | 296 | 468 | 38 | 173 | 335 | 340 | 348 | 347 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 8.9 | 11.6 | 7.3 | 7.4 | 7.3 | 6.9 | 6.7 | 7.1 | 7.4 | 7.3 | 7.1 | 7.3 | 10.1 | 10.8 | 11.7 | – | – | – | 10.8 | 10.9 | 11.4 |
Std Deviation (1e-4) | 1.9 | 1.8 | 1.1 | 1.3 | 1.3 | 1.1 | 1.3 | 1.5 | 1.6 | 1.6 | 1.8 | 1.8 | 1.3 | 1.5 | 1.7 | – | – | – | 2.2 | 2.0 | 2.0 |
Intensity Change (Log2) | – | – | – | 0.02 | -0.0 | -0.09 | -0.12 | -0.05 | 0.02 | 0.0 | -0.03 | -0.01 | 0.48 | 0.56 | 0.68 | – | – | – | 0.57 | 0.57 | 0.65 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0.2 | -0.5 | 0.1 | 0 | 0 | -0.1 | -1.1 | -0.6 | -1.2 | 1.0 | 0.3 | 0.1 | – | – | – |
Bud | 0 | 0 | 2.2 | 2.3 | 2.7 | 1.9 | 1.5 | 2.3 | 1.3 | 0 | 0 | 0 | – | – | – |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – |
Cell Periphery | 1.5 | 1.6 | 0.2 | 0 | 0 | 0 | 0 | 0 | 0 | 2.3 | 4.0 | 3.5 | – | – | – |
Cytoplasm | 1.5 | 2.9 | 0.9 | -1.7 | -4.3 | -3.4 | -5.6 | -5.0 | -6.4 | 1.0 | -2.3 | -0.8 | – | – | – |
Endoplasmic Reticulum | -3.4 | -6.8 | -7.0 | -13.9 | -14.2 | -14.3 | -17.0 | -15.4 | -15.4 | -1.0 | 1.5 | 0.7 | – | – | – |
Endosome | 0 | 0 | 0 | 3.6 | 3.9 | 3.3 | 4.2 | 0 | 0 | 0 | 0 | 0 | – | – | – |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – |
Mitochondria | 2.6 | 3.2 | 6.2 | 8.5 | 9.7 | 10.0 | 9.6 | 14.2 | 15.2 | -5.3 | -4.8 | -6.0 | – | – | – |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.5 | 0 | 0 | 0 | 0 | – | – | – |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.9 | 0 | 0 | 0 | – | – | – |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – |
Vacuole | 2.4 | 5.1 | 6.0 | 9.9 | 10.0 | 9.2 | 11.2 | 7.3 | 6.2 | 3.7 | 1.6 | 1.6 | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.511 | 5.506 | 4.5931 | 4.0009 | 3.9821 | 4.875 | 6.2524 | 7.3067 | 6.6958 | 6.3541 | 5.0964 | 6.6202 | 5.465 | 5.8242 | 5.1415 | 5.7688 | 4.8014 | 5.4203 |
Actin | 0.0099 | 0.0013 | 0.0128 | 0.0033 | 0.0126 | 0.0039 | 0.0144 | 0.0103 | 0.0128 | 0.004 | 0.0045 | 0.0039 | 0.0112 | 0.0016 | 0.0068 | 0.0007 | 0.0023 | 0.0008 |
Bud | 0.0073 | 0.0016 | 0.0056 | 0.0002 | 0.0008 | 0.0027 | 0.0002 | 0.0001 | 0.0011 | 0.0004 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0002 | 0 |
Bud Neck | 0.0006 | 0.001 | 0.0019 | 0.0007 | 0.0013 | 0.0016 | 0.0006 | 0.0006 | 0.0051 | 0.0014 | 0.0012 | 0.0012 | 0.0003 | 0.0004 | 0.0006 | 0.0006 | 0.0006 | 0.0009 |
Bud Periphery | 0.0022 | 0.001 | 0.0022 | 0.0006 | 0.0017 | 0.0007 | 0.0002 | 0.0002 | 0.0029 | 0.0012 | 0.0002 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0004 | 0.0002 | 0.0001 |
Bud Site | 0.0021 | 0.0195 | 0.0129 | 0.0005 | 0.0019 | 0.0006 | 0.0015 | 0.0022 | 0.0051 | 0.001 | 0.0002 | 0.0002 | 0.0003 | 0.0015 | 0.0005 | 0.0001 | 0.0004 | 0.0001 |
Cell Periphery | 0.0016 | 0.0035 | 0.0031 | 0.0012 | 0.0034 | 0.0015 | 0.0019 | 0.0057 | 0.0054 | 0.003 | 0.0035 | 0.0025 | 0.0013 | 0.0016 | 0.0016 | 0.0022 | 0.0008 | 0.001 |
Cytoplasm | 0.1168 | 0.2307 | 0.2057 | 0.1535 | 0.2038 | 0.2046 | 0.1053 | 0.1614 | 0.1248 | 0.1821 | 0.1908 | 0.1384 | 0.0474 | 0.09 | 0.093 | 0.0382 | 0.221 | 0.0888 |
Cytoplasmic Foci | 0.0446 | 0.0127 | 0.0285 | 0.0148 | 0.0447 | 0.0171 | 0.0284 | 0.0139 | 0.0199 | 0.0194 | 0.0141 | 0.0145 | 0.0256 | 0.02 | 0.0218 | 0.0283 | 0.0274 | 0.014 |
Eisosomes | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0.0001 | 0.0003 | 0.0018 | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0 |
Endoplasmic Reticulum | 0.5291 | 0.589 | 0.5244 | 0.6066 | 0.3839 | 0.6384 | 0.6253 | 0.6377 | 0.6419 | 0.654 | 0.6854 | 0.7085 | 0.6352 | 0.6683 | 0.6596 | 0.6783 | 0.5 | 0.6889 |
Endosome | 0.1168 | 0.0492 | 0.0881 | 0.0718 | 0.1154 | 0.0544 | 0.0742 | 0.0414 | 0.0674 | 0.0518 | 0.0305 | 0.0423 | 0.0779 | 0.0479 | 0.059 | 0.0692 | 0.1218 | 0.0748 |
Golgi | 0.033 | 0.008 | 0.0199 | 0.0106 | 0.0329 | 0.0103 | 0.0291 | 0.0099 | 0.0195 | 0.0225 | 0.0079 | 0.0159 | 0.016 | 0.0087 | 0.0153 | 0.0411 | 0.0131 | 0.0135 |
Lipid Particles | 0.0518 | 0.0284 | 0.0418 | 0.0592 | 0.0487 | 0.0276 | 0.0746 | 0.0842 | 0.0542 | 0.0211 | 0.0404 | 0.041 | 0.1473 | 0.1348 | 0.1157 | 0.1139 | 0.0847 | 0.0918 |
Mitochondria | 0.0078 | 0.0013 | 0.0119 | 0.0224 | 0.0412 | 0.0019 | 0.004 | 0.0014 | 0.0115 | 0.006 | 0.0016 | 0.0056 | 0.001 | 0.0004 | 0.0012 | 0.0016 | 0.0056 | 0.0016 |
None | 0.013 | 0.0166 | 0.0113 | 0.0102 | 0.0622 | 0.0128 | 0.0073 | 0.0065 | 0.0013 | 0.0014 | 0.0082 | 0.0091 | 0.0084 | 0.0017 | 0.0011 | 0.001 | 0.0017 | 0.0011 |
Nuclear Periphery | 0.0219 | 0.0135 | 0.0098 | 0.0258 | 0.0117 | 0.0086 | 0.0097 | 0.0082 | 0.007 | 0.009 | 0.005 | 0.0048 | 0.0142 | 0.0118 | 0.0123 | 0.0082 | 0.0072 | 0.0102 |
Nucleolus | 0.0011 | 0.0005 | 0.0004 | 0.0003 | 0.001 | 0.0002 | 0.0003 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0 | 0.0001 | 0 |
Nucleus | 0.008 | 0.0055 | 0.0028 | 0.0016 | 0.0041 | 0.0026 | 0.0011 | 0.0011 | 0.0011 | 0.0014 | 0.0007 | 0.0006 | 0.0006 | 0.0014 | 0.0008 | 0.0005 | 0.0022 | 0.0013 |
Peroxisomes | 0.011 | 0.0002 | 0.0023 | 0.0037 | 0.0052 | 0.0003 | 0.01 | 0.0004 | 0.0036 | 0.004 | 0.0005 | 0.0024 | 0.0013 | 0.0004 | 0.0005 | 0.0002 | 0.0003 | 0.0002 |
Punctate Nuclear | 0.0077 | 0.002 | 0.0029 | 0.0007 | 0.0039 | 0.001 | 0.0031 | 0.0014 | 0.0006 | 0.0004 | 0.0004 | 0.0004 | 0.0012 | 0.0012 | 0.0007 | 0.0011 | 0.0012 | 0.0004 |
Vacuole | 0.0112 | 0.0132 | 0.0095 | 0.0095 | 0.0158 | 0.0081 | 0.0074 | 0.0107 | 0.0127 | 0.0138 | 0.004 | 0.0073 | 0.0094 | 0.0078 | 0.0082 | 0.0125 | 0.0079 | 0.0091 |
Vacuole Periphery | 0.0023 | 0.001 | 0.0018 | 0.0022 | 0.0035 | 0.001 | 0.001 | 0.0008 | 0.0018 | 0.0021 | 0.0006 | 0.0009 | 0.0011 | 0.0006 | 0.001 | 0.0015 | 0.0012 | 0.0014 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 36.1772 | 28.7468 | 27.3309 | 41.1241 | 26.0585 | 45.1965 | 33.1533 | 39.8481 | 41.2808 | 35.4753 |
Translational Efficiency | 1.32 | 1.1784 | 1.4106 | 0.9889 | 1.2013 | 1.1711 | 1.286 | 0.9651 | 1.1855 | 1.1024 |
Dataset | Hit |
---|---|
Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|