Standard name | |
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Human Ortholog | |
Description | Zinc cluster transcriptional activator; necessary for derepression of a variety of genes under non-fermentative growth conditions, active after diauxic shift, binds carbon source responsive elements; relative distribution to the nucleus increases upon DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 |
Bud | 0 | 2 | – | 0 | 1 | 2 | 2 | 2 | 0 | 3 | 0 | 3 | 0 | 0 | 5 | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 1 | 4 |
Bud Neck | 1 | 0 | – | 0 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Bud Site | 0 | 0 | – | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 2 | 5 | 0 | 1 | 0 | 0 | 0 | 0 |
Cytoplasm | 79 | 132 | – | 23 | 109 | 64 | 96 | 134 | 53 | 77 | 43 | 55 | 106 | 235 | 271 | 94 | 131 | 230 | 126 | 123 | 24 | 73 | 120 | 163 |
Endoplasmic Reticulum | 0 | 0 | – | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 9 | 7 | 18 | 30 | 0 | 0 | 1 | 0 | 1 |
Endosome | 3 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 1 | 1 | 9 | 1 | 0 | 0 | 2 | 2 |
Golgi | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 0 |
Mitochondria | 0 | 25 | – | 3 | 20 | 16 | 60 | 73 | 58 | 61 | 41 | 67 | 5 | 14 | 33 | 7 | 3 | 5 | 34 | 10 | 1 | 3 | 3 | 8 |
Nucleus | 17 | 0 | – | 0 | 2 | 0 | 4 | 7 | 3 | 5 | 4 | 8 | 1 | 0 | 1 | 1 | 0 | 3 | 4 | 1 | 0 | 0 | 1 | 1 |
Nuclear Periphery | 1 | 2 | – | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | – | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | – | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 | 0 | 0 | 0 | 1 | 4 |
Vac/Vac Membrane | 2 | 4 | – | 0 | 1 | 1 | 7 | 2 | 2 | 2 | 4 | 2 | 2 | 4 | 14 | 3 | 2 | 2 | 23 | 6 | 0 | 5 | 8 | 9 |
Unique Cell Count | 101 | 145 | 23 | 119 | 76 | 144 | 181 | 95 | 114 | 81 | 103 | 110 | 243 | 294 | 102 | 138 | 239 | 248 | 148 | 29 | 92 | 147 | 203 | |
Labelled Cell Count | 104 | 165 | 26 | 134 | 84 | 173 | 224 | 118 | 150 | 98 | 136 | 114 | 255 | 326 | 121 | 150 | 266 | 248 | 148 | 29 | 92 | 147 | 203 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.0 | 3.1 | – | 2.8 | 3.3 | 3.6 | 3.1 | 3.2 | 3.0 | 2.6 | 3.7 | 2.6 | 4.1 | 4.0 | 3.9 | 5.3 | 5.3 | 6.0 | 4.1 | 3.8 | 4.5 |
Std Deviation (1e-4) | 0.7 | 0.8 | – | 0.6 | 1.6 | 2.0 | 1.3 | 2.0 | 1.9 | 1.1 | 2.3 | 1.3 | 0.8 | 1.1 | 1.2 | 1.8 | 2.0 | 2.3 | 1.1 | 1.2 | 1.5 |
Intensity Change (Log2) | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -0.3431 | 0.0778 | 0.1786 | -0.5214 | -0.8335 | -0.0497 | 0.5631 | 0.4045 | 0.4997 | -0.1516 | 0.1248 | 0.5658 | -1.4623 | -1.7361 | -1.4768 | -1.303 | -0.4748 | -1.236 |
Actin | 0.0246 | 0.0032 | 0.0357 | 0.0003 | 0.0629 | 0.0016 | 0.029 | 0.0028 | 0.0082 | 0.0006 | 0.0024 | 0.0083 | 0.0567 | 0.0003 | 0.0001 | 0.0246 | 0.0506 | 0.0013 |
Bud | 0.0012 | 0.0005 | 0.0011 | 0.0002 | 0.0003 | 0.0001 | 0.001 | 0.0028 | 0.0009 | 0.0001 | 0.0005 | 0.0003 | 0.0021 | 0 | 0 | 0.0018 | 0.0006 | 0.0006 |
Bud Neck | 0.0117 | 0.0006 | 0.0085 | 0.0003 | 0.0013 | 0.0019 | 0.0009 | 0.0001 | 0.0003 | 0.0002 | 0.0034 | 0.0018 | 0.0002 | 0 | 0 | 0.0013 | 0.001 | 0.0049 |
Bud Periphery | 0.0018 | 0.0007 | 0.002 | 0.0004 | 0.0003 | 0.0001 | 0.0032 | 0.0027 | 0.0013 | 0.0001 | 0.0007 | 0.0005 | 0.0175 | 0 | 0 | 0.0025 | 0.0007 | 0.0019 |
Bud Site | 0.0249 | 0.0221 | 0.0055 | 0.0003 | 0.0014 | 0.0003 | 0.0019 | 0.0049 | 0.0027 | 0.0001 | 0.0079 | 0.0005 | 0.0005 | 0.0001 | 0.0001 | 0.0061 | 0.0039 | 0.0002 |
Cell Periphery | 0.0007 | 0.0004 | 0.0013 | 0.0001 | 0.0001 | 0.0001 | 0.0004 | 0.0001 | 0.0004 | 0 | 0.0003 | 0.0001 | 0.0004 | 0 | 0 | 0.0005 | 0 | 0.0001 |
Cytoplasm | 0.152 | 0.287 | 0.1943 | 0.2805 | 0.1591 | 0.3222 | 0.1301 | 0.283 | 0.2307 | 0.2332 | 0.2885 | 0.316 | 0.0225 | 0.0887 | 0.0696 | 0.0275 | 0.0294 | 0.0928 |
Cytoplasmic Foci | 0.0157 | 0.0068 | 0.0117 | 0.0087 | 0.0451 | 0.0162 | 0.0485 | 0.0134 | 0.0197 | 0.0122 | 0.0288 | 0.0175 | 0.0067 | 0.0026 | 0.0081 | 0.0059 | 0.0118 | 0.0097 |
Eisosomes | 0.0004 | 0.0002 | 0.0008 | 0.0002 | 0.002 | 0.0001 | 0.0003 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0007 | 0.0001 | 0.0002 | 0.0003 | 0.0002 | 0.0001 |
Endoplasmic Reticulum | 0.0031 | 0.0026 | 0.0055 | 0.0032 | 0.0025 | 0.0029 | 0.0056 | 0.0014 | 0.0027 | 0.0012 | 0.0054 | 0.0021 | 0.0009 | 0.0015 | 0.0007 | 0.0018 | 0.0004 | 0.001 |
Endosome | 0.0079 | 0.0041 | 0.0113 | 0.0042 | 0.0069 | 0.0045 | 0.0447 | 0.0016 | 0.0164 | 0.0077 | 0.0228 | 0.0089 | 0.0045 | 0.0005 | 0.0011 | 0.0278 | 0.0008 | 0.0007 |
Golgi | 0.0076 | 0.0042 | 0.0082 | 0.0001 | 0.0028 | 0.0007 | 0.0184 | 0.0002 | 0.0075 | 0.0043 | 0.0129 | 0.008 | 0.0059 | 0.0001 | 0.0001 | 0.018 | 0.0032 | 0.0001 |
Lipid Particles | 0.0128 | 0.0104 | 0.0096 | 0.0015 | 0.0072 | 0.001 | 0.032 | 0.0003 | 0.0092 | 0.0126 | 0.0325 | 0.0107 | 0.0122 | 0.0002 | 0.0003 | 0.002 | 0.0012 | 0.0003 |
Mitochondria | 0.0024 | 0.0052 | 0.0196 | 0.0007 | 0.0019 | 0.021 | 0.0123 | 0.0003 | 0.004 | 0.001 | 0.0179 | 0.0061 | 0.0025 | 0.0001 | 0.0002 | 0.0141 | 0.0018 | 0.0002 |
None | 0.7009 | 0.6178 | 0.6153 | 0.6771 | 0.6636 | 0.5629 | 0.6394 | 0.6682 | 0.6626 | 0.7074 | 0.5515 | 0.5809 | 0.8467 | 0.904 | 0.9033 | 0.857 | 0.8608 | 0.8793 |
Nuclear Periphery | 0.0024 | 0.0012 | 0.009 | 0.002 | 0.0062 | 0.0029 | 0.0087 | 0.0012 | 0.0052 | 0.0011 | 0.0033 | 0.0039 | 0.0024 | 0.0003 | 0.0013 | 0.0016 | 0.0002 | 0.0006 |
Nucleolus | 0.0007 | 0.0004 | 0.0015 | 0.0007 | 0.0029 | 0.001 | 0.0006 | 0.0002 | 0.0005 | 0.0001 | 0.001 | 0.0006 | 0.0011 | 0.0001 | 0.0003 | 0.0002 | 0 | 0.0002 |
Nucleus | 0.0152 | 0.0206 | 0.0474 | 0.0113 | 0.0107 | 0.0441 | 0.0033 | 0.0084 | 0.0098 | 0.0065 | 0.0024 | 0.0145 | 0.0008 | 0.0008 | 0.0102 | 0.0007 | 0.0001 | 0.0012 |
Peroxisomes | 0.0079 | 0.0086 | 0.0055 | 0.0005 | 0.0036 | 0.0007 | 0.0099 | 0.0009 | 0.0066 | 0.0076 | 0.0051 | 0.0064 | 0.0045 | 0.0001 | 0.0001 | 0.0015 | 0.032 | 0.0002 |
Punctate Nuclear | 0.0025 | 0.0015 | 0.0021 | 0.0016 | 0.0181 | 0.0143 | 0.003 | 0.0063 | 0.0079 | 0.0029 | 0.0061 | 0.0109 | 0.0106 | 0.0003 | 0.0037 | 0.0005 | 0.0009 | 0.0044 |
Vacuole | 0.0034 | 0.0016 | 0.0032 | 0.0056 | 0.0006 | 0.0011 | 0.0042 | 0.001 | 0.0025 | 0.0008 | 0.0054 | 0.0012 | 0.0003 | 0.0004 | 0.0004 | 0.0028 | 0.0001 | 0.0003 |
Vacuole Periphery | 0.0004 | 0.0002 | 0.0009 | 0.0005 | 0.0005 | 0.0002 | 0.0027 | 0.0001 | 0.0009 | 0.0002 | 0.0013 | 0.0009 | 0.0003 | 0 | 0.0001 | 0.0013 | 0 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 0.513 | 0.2293 | 0.5104 | 1.1867 | 0.4988 | 0.769 | 1.1591 | 1.2517 | 1.3476 | 1.35 |
Translational Efficiency | – | – | – | – | – | – | – | – | – | – |
Dataset | Hit |
---|---|
Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | – |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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