Standard name | |
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Human Ortholog | |
Description | Putative catalytic subunit of a class II histone deacetylase complex; role in azole resistance via Hsp90p, and in the heat shock response; Hda1p interacts with the Hda2p-Hda3p subcomplex to form an active tetramer; deletion increases histone H2B, H3 and H4 acetylation; other members of the HDA1 histone deacetylase complex are Hda2p and Hda3p |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 1 | 0 | 0 | 3 | 2 | 6 | 2 | 9 | 12 | 7 | 7 | 0 | 0 | 0 | 0 | 1 | 0 | 5 | 2 | 6 | 0 | 1 | 0 |
Bud Neck | 0 | 0 | 2 | 0 | 2 | 1 | 3 | 2 | 0 | 0 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 |
Bud Site | 1 | 0 | 1 | 0 | 2 | 12 | 12 | 4 | 20 | 17 | 7 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 5 | 4 | 4 | 26 | 18 | 18 | 20 | 28 | 9 | 10 | 20 | 17 | 7 | 15 | 9 | 4 | 6 | 9 | 0 | 2 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 2 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 1 | 0 |
Endosome | 0 | 0 | 1 | 1 | 0 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 3 | 3 | 1 | 2 | 1 |
Golgi | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 1 | 0 |
Mitochondria | 33 | 36 | 4 | 14 | 17 | 118 | 166 | 59 | 259 | 285 | 304 | 121 | 5 | 2 | 4 | 4 | 6 | 11 | 2 | 2 | 3 | 0 | 0 | 0 |
Nucleus | 296 | 391 | 622 | 536 | 640 | 799 | 958 | 644 | 590 | 586 | 499 | 606 | 149 | 148 | 142 | 104 | 92 | 70 | 288 | 419 | 627 | 66 | 127 | 124 |
Nuclear Periphery | 4 | 3 | 1 | 4 | 1 | 5 | 6 | 2 | 5 | 13 | 10 | 13 | 1 | 3 | 0 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 39 | 36 | 7 | 8 | 23 | 65 | 128 | 51 | 145 | 122 | 107 | 153 | 12 | 20 | 32 | 4 | 5 | 4 | 24 | 9 | 13 | 9 | 22 | 19 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
SpindlePole | 0 | 1 | 7 | 1 | 7 | 10 | 16 | 16 | 4 | 8 | 4 | 12 | 0 | 1 | 1 | 1 | 0 | 2 | 2 | 1 | 4 | 0 | 2 | 0 |
Vac/Vac Membrane | 3 | 7 | 10 | 4 | 8 | 11 | 11 | 16 | 1 | 5 | 16 | 23 | 3 | 2 | 0 | 0 | 1 | 6 | 8 | 17 | 21 | 5 | 14 | 14 |
Unique Cell Count | 324 | 426 | 643 | 576 | 686 | 915 | 1116 | 758 | 769 | 765 | 752 | 807 | 160 | 175 | 160 | 110 | 102 | 86 | 340 | 463 | 686 | 86 | 180 | 168 |
Labelled Cell Count | 381 | 479 | 660 | 597 | 724 | 1042 | 1329 | 824 | 1043 | 1059 | 977 | 967 | 177 | 193 | 190 | 121 | 115 | 105 | 340 | 463 | 686 | 86 | 180 | 168 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 6.6 | 7.1 | 7.0 | 6.7 | 6.6 | 5.6 | 5.6 | 6.3 | 5.0 | 5.0 | 5.0 | 5.8 | 7.5 | 7.9 | 7.1 | 10.0 | 9.6 | 7.4 | 7.0 | 7.0 | 7.3 |
Std Deviation (1e-4) | 1.2 | 1.9 | 1.1 | 1.3 | 1.3 | 1.1 | 1.0 | 1.2 | 1.0 | 1.1 | 1.3 | 1.3 | 1.7 | 2.2 | 1.6 | 2.2 | 2.4 | 1.9 | 1.8 | 1.7 | 1.4 |
Intensity Change (Log2) | – | – | – | -0.06 | -0.08 | -0.32 | -0.33 | -0.16 | -0.49 | -0.5 | -0.5 | -0.28 | 0.1 | 0.16 | 0.02 | 0.51 | 0.45 | 0.08 | -0.01 | -0.01 | 0.05 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 2.5 | 0 | 0 | 3.8 | 3.4 | 0 | 2.5 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 4.4 | 2.9 | 2.2 | 2.0 | 3.8 | 1.1 | 1.3 | 2.9 | 2.4 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 2.6 | 2.7 | 8.9 | 9.7 | 6.4 | 15.9 | 17.0 | 17.9 | 9.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | -2.9 | -2.9 | -6.5 | -7.3 | -7.4 | -10.7 | -10.8 | -14.2 | -11.4 | -2.1 | -6.1 | -4.2 | -1.1 | -3.1 | -6.1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 2.9 | 2.5 | 2.8 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0.5 | 2.8 | 5.6 | 7.9 | 5.3 | 10.7 | 9.6 | 8.9 | 10.8 | 0 | 6.8 | 10.0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | -0.1 | 0 | 0.6 | 1.5 | -1.2 | -0.1 | -1.2 | 0.7 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -1.4 | -0.6 | -0.6 | -1.1 | 0.8 | -3.0 | -1.6 | 0.8 | 1.6 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 4.0905 | 3.7797 | 3.3781 | 3.4805 | 3.1115 | 3.2839 | 4.9701 | 4.9125 | 4.7143 | 4.7479 | 3.6414 | 4.1604 | 5.1284 | 4.302 | 3.8305 | 3.9789 | 3.7337 | 3.6317 |
Actin | 0.0241 | 0 | 0.0053 | 0 | 0.0239 | 0.0031 | 0.0015 | 0 | 0.0004 | 0 | 0.0038 | 0.0001 | 0.0114 | 0 | 0.0017 | 0.0025 | 0.0003 | 0.0097 |
Bud | 0.0005 | 0 | 0.0002 | 0 | 0.0008 | 0 | 0.0002 | 0 | 0.0003 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0.0002 | 0.0003 | 0 |
Bud Neck | 0.0017 | 0 | 0.0001 | 0.0001 | 0.0011 | 0.0004 | 0.0002 | 0 | 0.0002 | 0.0001 | 0.0003 | 0.0005 | 0.0009 | 0 | 0.0001 | 0.0001 | 0.0015 | 0.0004 |
Bud Periphery | 0.0005 | 0 | 0.0002 | 0 | 0.0014 | 0.0001 | 0.0003 | 0 | 0.0007 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0 | 0.0002 | 0.0003 | 0.0013 | 0.0001 |
Bud Site | 0.0039 | 0 | 0.0005 | 0 | 0.0033 | 0 | 0.001 | 0.0001 | 0.0009 | 0.0001 | 0.0007 | 0 | 0.001 | 0 | 0.0003 | 0.0011 | 0.001 | 0.0001 |
Cell Periphery | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 | 0.0002 | 0 | 0.0003 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0005 | 0 |
Cytoplasm | 0.0047 | 0 | 0.0011 | 0 | 0.0002 | 0.0002 | 0.0018 | 0.0004 | 0.0008 | 0 | 0.0008 | 0 | 0.0017 | 0 | 0.0004 | 0.0006 | 0.0007 | 0 |
Cytoplasmic Foci | 0.01 | 0 | 0.0029 | 0 | 0.0089 | 0.0004 | 0.0068 | 0.0059 | 0.0037 | 0 | 0.0066 | 0.0002 | 0.0067 | 0 | 0.0017 | 0.0233 | 0.0016 | 0.0007 |
Eisosomes | 0.0002 | 0 | 0 | 0 | 0.0003 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0.0027 | 0 | 0.0003 | 0 | 0.0006 | 0.0004 | 0.002 | 0 | 0.0004 | 0 | 0.0007 | 0.0002 | 0.0024 | 0 | 0.0009 | 0.0002 | 0.0022 | 0 |
Endosome | 0.0104 | 0 | 0.004 | 0 | 0.0148 | 0.0036 | 0.0088 | 0.006 | 0.0032 | 0 | 0.0077 | 0.0004 | 0.0064 | 0 | 0.0046 | 0.0054 | 0.0089 | 0.0014 |
Golgi | 0.0039 | 0 | 0.002 | 0 | 0.0189 | 0.0012 | 0.0015 | 0.0005 | 0.0011 | 0 | 0.0015 | 0.0002 | 0.0024 | 0 | 0.0011 | 0.0027 | 0.0012 | 0.0015 |
Lipid Particles | 0.0113 | 0 | 0.0022 | 0 | 0.018 | 0.0024 | 0.0042 | 0.0002 | 0.0048 | 0 | 0.0162 | 0.0016 | 0.0058 | 0 | 0.0041 | 0.007 | 0.0075 | 0.0023 |
Mitochondria | 0.0024 | 0 | 0.0031 | 0 | 0.0209 | 0.0012 | 0.0105 | 0.0001 | 0.0084 | 0.0002 | 0.0011 | 0.005 | 0.0011 | 0.0001 | 0.0021 | 0.0024 | 0.0024 | 0.0012 |
None | 0.0048 | 0 | 0.0018 | 0 | 0.0005 | 0.0005 | 0.0016 | 0.0001 | 0.0006 | 0 | 0.002 | 0 | 0.0007 | 0 | 0.0003 | 0.0008 | 0.0003 | 0 |
Nuclear Periphery | 0.0143 | 0.0002 | 0.0021 | 0.0001 | 0.002 | 0.0087 | 0.0053 | 0.0002 | 0.0088 | 0.0002 | 0.0126 | 0.002 | 0.0053 | 0.0001 | 0.0026 | 0.0027 | 0.0084 | 0.0001 |
Nucleolus | 0.0321 | 0.0174 | 0.0137 | 0.0347 | 0.1882 | 0.0729 | 0.0365 | 0.0189 | 0.0232 | 0.0333 | 0.1293 | 0.0779 | 0.024 | 0.0162 | 0.0094 | 0.0109 | 0.1727 | 0.0538 |
Nucleus | 0.829 | 0.9821 | 0.9533 | 0.9649 | 0.6759 | 0.9021 | 0.9094 | 0.9666 | 0.9329 | 0.9658 | 0.7995 | 0.9071 | 0.9198 | 0.9834 | 0.9673 | 0.9021 | 0.7751 | 0.9263 |
Peroxisomes | 0.0087 | 0 | 0.0007 | 0 | 0.0074 | 0.0006 | 0.0004 | 0.0002 | 0.003 | 0 | 0.0032 | 0.0001 | 0.0031 | 0 | 0.0003 | 0.0089 | 0.0004 | 0.0018 |
Punctate Nuclear | 0.0321 | 0.0001 | 0.0051 | 0.0002 | 0.0104 | 0.0012 | 0.0031 | 0.0007 | 0.0017 | 0.0001 | 0.0122 | 0.0041 | 0.0058 | 0.0001 | 0.0008 | 0.0285 | 0.0033 | 0.0003 |
Vacuole | 0.0015 | 0 | 0.0007 | 0 | 0.0011 | 0.0003 | 0.003 | 0.0001 | 0.0023 | 0 | 0.0008 | 0.0002 | 0.0007 | 0 | 0.0014 | 0.0002 | 0.0083 | 0.0001 |
Vacuole Periphery | 0.001 | 0 | 0.0005 | 0 | 0.0013 | 0.0004 | 0.0014 | 0 | 0.0022 | 0 | 0.0006 | 0.0002 | 0.0003 | 0 | 0.0007 | 0.0002 | 0.0021 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 15.0866 | 15.8118 | 17.9446 | 23.6961 | 19.2232 | 11.9586 | 18.5735 | 21.898 | 24.9319 | 22.3476 |
Translational Efficiency | 1.0256 | 1.0161 | 1.0299 | 0.8774 | 0.8013 | 1.1961 | 0.8358 | 0.7344 | 0.6551 | 0.7608 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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